Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,223,433 |
C→G |
11.0% |
G417G (GGC→GGG) |
dld → |
D‑lactate dehydrogenase, FAD‑binding, NADH independent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,223,433 | 0 | C | G | 11.0%
| 327.4
/ 4.0
| 141 | G417G (GGC→GGG) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
| Reads supporting (aligned to +/- strand): ref base C (42/77); new base G (13/6); total (56/85) |
| Fisher's exact test for biased strand distribution p-value = 1.02e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 144 total aligned reads displayed.
GTTCTTCTTTAATCTCAAGGGACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGTGCTATGTCTTCCAT > NC_000913/2223196‑2223670
|
aaGGGACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGG‑TGGGGGGGGGGAAGCCAAATCGTGGCTGGTGGGTTG‑TTTCAAACAGGCCGAAGGGGAATTCTTTGTCTgaag > 2:864478/1‑236 (MQ=255)
aaGGGACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTTAAACAGGCCGAAGGCGATTTCTTTGTCTT‑TAc > 1:592310/1‑239 (MQ=255)
aaGGGACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGGGGTTTCTTTGTCTG‑TAc > 1:420787/1‑239 (MQ=255)
gggCCGCCCCGTGGCGATGCGGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGGGCGATGCAAAAATTCGGTCCCCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGc < 2:1263319/239‑1 (MQ=255)
gagcccgcgttgtgttgcTGGAGAAAGTGAAATTCTTCCTTCCGCCTTTTTCTGGCCGGTGGAGGCAAAAATTCGGGCCCCGGTCCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGc < 2:508776/222‑1 (MQ=255)
gACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGc < 1:577407/237‑1 (MQ=255)
cGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGCTTTCTTTTTCTG‑TACGCCggg > 1:39906/1‑238 (MQ=255)
cGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTTTCTG‑TACGCCgga > 1:264734/1‑239 (MQ=255)
cGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGGGGCTGGTGGATTA‑TTTCCAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCgga > 1:423137/1‑239 (MQ=255)
gCACCGATGCGATGCTGGAGAAAGTGAAATGCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCAATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGAGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCggag < 1:819877/239‑1 (MQ=255)
cACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGGTTA‑TTTCCAACAGGCCCAAGGCGATTTCTTTGTCTG‑TACGCCggggg > 1:545793/1‑239 (MQ=255)
tgcgatgcTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAggaa > 1:1024978/1‑237 (MQ=255)
tgcgatgcTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑GGGCGTGGGCGCAGCCAAAACAGGGCGGGGGGGTTA‑TTTCAAACAGGCCGCAGGGGATTTCTTTTTCTT‑AACCCCgggggcaagc > 2:538882/1‑233 (MQ=255)
atgcTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGTGCGAAGCCCAATCGAGGCTGGGGGAGTA‑TTTTTAACAGGCGGAGGAGGATTTTTTTGTATG‑TTAGCGGGGGGaaagacaaaa > 2:664411/1‑231 (MQ=255)
tgcTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGGTAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTTAAACAGGCCGAAGGGGATTTCTTTGGCTG‑TACGCCGGAGGAAGGC‑GGC‑aaa > 1:127317/1‑239 (MQ=255)
tgcTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑GGGCGTGGGCGAAGCCCAATCGTGGCTGGGGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TAAGCCGGGGGAAGGC‑AGC‑aaa > 1:986569/1‑239 (MQ=255)
ggtgggaaaaGTGAATTTTTTCCGCCCCCATTTTCAGGCCCGTGGGGTGAAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CAAGAAAAACTGGCGGGATAAATACGGGCATCATGTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑g < 2:779018/232‑1 (MQ=255)
ggtGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑g < 1:1259624/237‑1 (MQ=255)
ttGGAGAAAGTGAAAGTCTTCCGTCCGCTTTTTACTTGCCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑g < 1:745136/237‑1 (MQ=255)
aGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTC‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑GGGCGCTGGCGAAGCCAAATCCGGGCTGGGGGATGA‑TTTCAAAAAGGACTGCGGCGAATACTTTTTCTG‑TCCGCCGGCGGaaagaagacaaaggtgatta > 2:735913/1‑220 (MQ=255)
aGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGGCA‑TGGCGGGGGCGAAGCCAAATCCTGGCTGGTGGCGTA‑TTTGTAACAGGCCGAAGGGGGTTTCTTTTTTTG‑TACGCAGGGGGAAggaccacaagcgagtttcc > 2:1019196/1‑222 (MQ=255)
aGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGGGGGGGCGAAGCCAAATCGGGGCTGGGGGGTTA‑TTTTCAAAAGGGCGAAGGGGGTTTCTTTTTTTT‑GTCGCCGGGGGGAGGG‑AGa‑aaaaaggtgttaa > 2:1305760/1‑229 (MQ=255)
aGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGGCCT‑TACGCCGGGGGGAGGC‑AGC‑AAA‑GCGTTTTTa > 1:207640/1‑238 (MQ=255)
tGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCCTCTGCTGTTAAAAATGGCGGGGGA‑TGGGGTGGGCGAAGCCAAAACGCGGCTGGGGGTGTT‑TTTCAAACAGGCGGAAGG‑GAGTTTTTTTTTTGTTACCGCGGGGGAAGGA‑AGC‑AAA‑ACGttttttacc > 2:294963/1‑235 (MQ=255)
tGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCCAAGGCGATTTCTTTGCCTG‑TACTCCGGAGGGAGGC‑AGC‑AAA‑GGGttttttaa > 1:1151521/1‑235 (MQ=255)
ctttttACGGTCGGTGGGATGCAAAAATTCGGTCACCTTTTCCCCAGCCATTTT‑CCGGCGTC‑GATGAAAAACTGGCGGGATAAATACGAGCATCATCTGCTGTTAAAAATGGGGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCggg < 2:563953/237‑1 (MQ=255)
cATTTTACGGACCGTGCGAGGCAAAAATTCGGTCCCCGTTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCggg < 2:798961/239‑1 (MQ=255)
ccGTGCGTTGCAAAAATGCGGTATCGTGTTCACCAGCAATTTA‑CCGCAGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATGTGGTGTAAAAAAGGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGTTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAAtt < 2:213933/238‑1 (MQ=255)
gTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGGGGATTA‑TTTCAAACAGGCCGAAGGGGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTAAACCGTTTCGCCGCTGCGGGCGCGGCAATTCGt > 1:166670/1‑239 (MQ=255)
gCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCCGTGCTGGGGGGTTATTTTCAAAGGGGCCGAGGGGGTTTTCTTT‑TCTG‑GGAGGCGGGGGAAGGCAAGA‑CAA‑GGGTTTTTAC‑CCGTTTTCGCGCTGGGGgcgggggaactaggta > 2:1319048/1‑226 (MQ=255)
ttGCAAAATCTCGGTCCCCTTGTCCCCGGCCTTTTA‑CCGCCGGG‑CATGAAAAACTGGCGGGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TGTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATc < 2:965613/237‑1 (MQ=255)
gCAAAAATTCGGTACCCTTTTCCCCAGCCATTTC‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATCCGGGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTGCACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAgg < 2:105457/239‑1 (MQ=255)
gCAAAAATGCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGGG‑GATGAAAAACTGGCGCGATAAATACGATCATCATCTGATGTTAAAAATGGCGGGCGA‑TGGCGTGGGCTAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGGCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAgg < 1:562095/239‑1 (MQ=255)
aaaatttcgtgcctcTGTTCCACAACCATTTA‑CCGCCGGGACAT‑AAATACTGGCTTGTTAAATACGAGCATTATCTGCTGTTAAAAGTGGCGGGGGA‑TGGCGTGGGCGATGCCAAATCGTGGCTGGTAGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTT‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTGCCCCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAgggg < 2:344101/225‑3 (MQ=255)
cGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGGGCAGCAATTCGTTATCAGGCGGTGCAt > 1:67199/1‑238 (MQ=255)
ccTGTTCCCCAGCCCTTTATCTGCCGTC‑TAT‑AAAATCGGGCGGGATAATTGCGGGCATCTGTTGCTGTTAAAAATGGTGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGGCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTCCGCCGGTGCGGGCCAAGCAATTCGTCATCAGGCGGTGCATTCCGATg < 2:1122769/239‑1 (MQ=255)
ccTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATg < 1:1319048/239‑1 (MQ=255)
cccAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGGTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGa < 2:582024/239‑1 (MQ=255)
cccccttttA‑CCGCCGCG‑CATGAAAAACTGGGGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAg < 2:542152/233‑1 (MQ=255)
aTTTA‑CCGCCGGG‑CATGAAAAACTGGCGCGATAAAGACGAGCATCATCTGGTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACAtt < 1:672236/239‑1 (MQ=255)
aTTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑aa > 1:1308555/1‑160 (MQ=255)
aTTTA‑CCCCCGGC‑GATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACAtt < 1:805117/239‑1 (MQ=255)
tA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGGGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGCAAAA‑GGGTTTTTA‑ACCGGTTCGCCGCTGCGGGCCCGCCAATTCGTTATCAGGGGGGGCATTTCCAGTAAGG‑CGAAAAAATTCTg > 2:754911/1‑239 (MQ=255)
cgacggggaggAAAAACTGGCGCGATAAATACGGGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCg < 1:313096/229‑1 (MQ=255)
ccgcG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGGTTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCCTTCCGATGAAGT‑CGAAGACATTCTGGCGtt > 1:999505/1‑239 (MQ=255)
ccgcG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGGGGATTA‑TTTCAAACCAGCCGGAGGCGGTTTCTTTGTCTG‑TACCCCGGGGGAAGGC‑AGC‑AAA‑GCGGTTTTAAACCGTTTTGCCGCTGCGGGCGCGGCCACTCGTTATCAGGGGGTGCCTTCCGGTGAAGT‑CCaaaaaaattctggggt > 2:39755/1‑225 (MQ=255)
cg‑cATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAAAAGGGCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGG‑AGA‑CAA‑ACGTTTTTACCCCGGTTTGCCCCCCGGGGGGCAGCAATTGGTTCTACGGCGCGGCATTCCCAGGCAGA‑CGAAGAccctgcggcgtgggg > 2:1188570/1‑225 (MQ=255)
cg‑cATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAAACGTGGCTGGTGGAATA‑TTTCAAACCGGCCGAAGGCGATTTGTTTGTCTG‑GTAGCCGGGGGGAGGC‑AGC‑AAA‑GCGGTTTTCTACCGTTTCGCCCCTCCGGGGCCAGCAAATCCGTTTCATGCGTGGCACTTCGATGAAGTGCGAA‑AGAATCTGGCGTTggc > 2:314165/1‑238 (MQ=255)
aagAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGata < 1:803315/236‑1 (MQ=255)
aTGAAAAACCTGCGCGAAAAAACCGGGCATCGTCTGCTGTTAAAAATGGGGGGCGAGTGGC‑TGGGCGAAGCCAAATCGTTGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTGCTTTGTCTG‑TACGCCGGAGGAAGGT‑AGG‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGTGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGata < 2:943796/238‑1 (MQ=255)
acgggCCCGATAAATACGAGCATCTTTTGTTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTg < 2:1302529/236‑1 (MQ=255)
ggCGGGGTAAATAGGGGCATTAGTTGCTGTTAAAAATGGCGGGCGA‑GGGCGGTGGCGGAGCCAAAGCGTGGTCGGGGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGGCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTgcgg < 2:1188751/239‑1 (MQ=255)
ggcggtaaaaaacggagtacttcTGTTGGTAAAAGTGGGGGGCGA‑GGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTgcgg < 2:39906/217‑1 (MQ=255)
gATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTaa < 1:492303/239‑1 (MQ=255)
aTAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGAAAc > 1:1157438/1‑239 (MQ=255)
aTACGGGCATCCTCTGGTGTTAAAAATGGCGGGCGA‑TGGGGTGGGCGAAGCCAAATCGTGGGTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGaca < 2:189730/239‑1 (MQ=255)
aTACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGaca < 2:423137/239‑1 (MQ=255)
gCATCATTTGTTTTTAAAAATGGCGGGCGT‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGGTGATTA‑TGTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCATTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGt < 2:1215330/239‑1 (MQ=255)
gCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGCAACCGAGt > 1:224378/1‑239 (MQ=255)
gCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAg < 1:157642/238‑1 (MQ=255)
gCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAg < 1:754911/238‑1 (MQ=255)
gCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAg < 1:39755/238‑1 (MQ=255)
catcatCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGTAGCCAAATCGTGGCTGGTGGGTTA‑TTTCAAAAAGGCCGAAGGCGATTTCTTTGTCTG‑TACCCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTTCACCGTTTCGCCGCTGCGGGGGACGCAATTCGTTATCAGGGGGGGCATTCCGATGAAGT‑CGAAGACATTCTTGCGTTGGGTATCGCCCTGCGGCGTAAAGACCCCGAggg > 2:731232/1‑237 (MQ=255)
catcatCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGGGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCCGCGCGGGGGCAGCAATTCGTTATCAGGCGGTGCCTTCCGCTGAAGT‑GGGAGACATTCTGGCGTTGGAAAAGGCCCTGCGGGGGAACAAAACCggggg > 2:429599/1‑235 (MQ=255)
cattTGCGGTTAAAAATGGCCGGCGA‑GGGCGTGGGAGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTa < 1:1344224/239‑1 (MQ=255)
atttgcttTTAAAAATGGCGGGCGA‑GGGCGTGGGCGAAGCCAAATCGGGGCTGGTGGATTA‑GTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTAt < 2:988049/236‑1 (MQ=255)
atcTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGGGGATTA‑TTTCAAACAGGCCGGAGGGGGTTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GGGGTTTTACACCGTTTTGCCGCTGCGGGCGCAGCACGTCGTTATCGAGCGGGTCCTTTCTATGAAGC‑CGCAGACATTCTCGCGTTGGATATCGCTCTGCGGGGTAACGAAACCGAggggagt > 2:1033038/1‑236 (MQ=255)
gtggttgTTAAAAATGGGGGGGGA‑TGGGGTGGGCGAAGCAAATTCGTGGTTGGTGGGTTA‑TTACAAACAGGCCTAAGGCGATTTCTTGTCCTG‑TCCGCCGGAGGAGGGC‑AGC‑AAA‑GCGTTTTTACACGGTTTCGCCGGTGCGGGCGCAGCAATTCGGTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTAt < 2:637479/233‑1 (MQ=255)
gTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGGGGATTA‑TTTTAAAAAGGCCGAAGGCGATTTCTTTGTCTG‑TGCGCCGGGGGAAGGC‑AGC‑AAACGGGTTTTTA‑ACCGTTTCTCCGCTGCGGGCGCAGGAATTCGTTATCAGGAGGGGCATTCCGCTGAAAT‑GGAAGAACTTCTGGGGTGGGGAATCGCTCTCCGGCGGAAGGagaacccgagggatgggcatt > 2:298775/1‑219 (MQ=255)
aaaaaTGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACg > 1:1334585/1‑215 (MQ=255)
aaaaaTGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACg < 2:1334585/215‑1 (MQ=255)
aaaaTGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCg < 1:860980/189‑1 (MQ=255)
attGGCGGGGCG‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCTATTTCTTTGTCTG‑TACGGCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTCccgc < 2:482484/237‑1 (MQ=255)
cgggcgA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTAACCCGTTTCGCCGCTGCGGGCGCAGCCATTCGTTATCCGGCGGGGCATTCCCATGAAGT‑CGGAGACAATCTTGCGTTGGATACAGCCCTTCGGGGTAACGACCCCCGGGGGGATGGGAATTTACCCCCggga > 2:755249/1‑237 (MQ=255)
tgttgataaggaacaggCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGGGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATc < 1:426217/222‑1 (MQ=255)
a‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCg > 1:113715/1‑57 (MQ=255)
gggCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGGGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAAATCgcaagcacgc > 1:565875/1‑230 (MQ=255)
ggtactcaattggTGGCTGGGGGGTTA‑TTTCAACCCGGCCGAAGGGGTTTTTTTTGTCGT‑GACCGCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTAACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTg < 2:596835/226‑1 (MQ=255)
aGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGC‑CGAAGACATCCTGGCGTTGGGTATCGCTCTTCGGCGTAACGACACCGAGTGGTATGAGCATTTAACGCCGGAGATCGACAGCCAGCTGGTg > 1:193483/1‑238 (MQ=255)
cAATTCTTGGCTGGTGGATTA‑GTCCAAACCGGGCGAAGGGTAGTTCTTTGGCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTTCCCCGTTTCGCCGCTGCGGGGGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGcaca < 2:1259004/239‑1 (MQ=255)
cAAATCGTTGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCGT‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGcac < 1:310052/238‑1 (MQ=255)
caatttgtgtggggggggttttttCAAACGGGGCGAAGGCGATTTCTTTGTCTG‑GACGCGGGAGGAAGGC‑CGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCAGTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGcac < 2:1112386/217‑1 (MQ=255)
aaaTCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACaa < 1:453473/239‑1 (MQ=255)
aaaTCGGGTCGGGTGGTTTA‑TTACAAACAGGCCGGAGGGGATTTCTTTGGCGG‑GACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGcaca < 2:193483/238‑1 (MQ=255)
aaTCGTGTCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGGGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAg < 1:628303/239‑1 (MQ=255)
tggtggtgggtggGTTA‑TTTCAAACAGGCCGAAGGTGCTTTTTTTGTCTG‑TGCGCCGGAGGGAGGC‑AGC‑AAA‑GCGTTTTTACGCCGTTTCCCCGCTGCGGGGTCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTTGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGct < 2:792409/231‑1 (MQ=255)
gCTGGTGGCTTA‑TTTCAAACAGGCCGAAGGCGCTTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCCGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGGTACGACACCGAGGGGGCTGAGCATTTACCGCCGGAGATCGCaagccacc > 2:426217/1‑219 (MQ=255)
gATTA‑TTTCAAACAGGCCGAAGGCGATTTTTTTGTCTG‑TACGTCGGAGGAAGGA‑AGC‑AAA‑GCGTTTTTACCCCGGTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGcc < 1:538882/238‑1 (MQ=255)
gATTA‑TTTCAAACAGGCCGAAGGCGATTTCCTGGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTGCACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGcc < 1:938693/238‑1 (MQ=255)
a‑ttTCAACCAGGCCGAAGGCCATTTCTGTGTCTG‑TACGCCGGAGGAAGGC‑AGA‑AAA‑GCGTTTTTACGCCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCAtttt < 1:1213396/239‑1 (MQ=255)
a‑ttTCAAACCGGCCGAAGGAGATTTCTTTGGCTG‑GCCGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTGCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCAtttt < 1:856572/239‑1 (MQ=255)
ttCAAACAGGCCGAAGGGGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTGTTACACCGTTTCGCAGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTAt < 1:1046134/239‑1 (MQ=255)
aaaCAGGCAGAAGGGGTTTTTTTTGTCGT‑GACGCCGGAGGAAGGA‑CGC‑AAA‑GCTTTTTTACACCGTTCCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGCGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTAtgtg < 2:549844/239‑1 (MQ=255)
gCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGCGTGGTATGGGCATTTACCGCCGGAGACCGCCAGCCAGCTGGGGCACAAGGTCTATTCAGGGCATTTTAttgtgttttt > 2:623926/1‑230 (MQ=255)
gCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACGGCCGGAGATCGCCAGCCAGCTGGTGCACAAGCTCTCTTACGGCCATTTTATGGGCTATg > 1:937910/1‑238 (MQ=255)
gCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGTGCTATGt > 1:991428/1‑239 (MQ=255)
gCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGGGCTATg > 1:279966/1‑238 (MQ=255)
gCCGAAGGCGATCTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGGGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTAtcggccatg > 1:1085406/1‑230 (MQ=255)
gAAGGCGATTTCTTTGTCTG‑TACGCCGGGTGAAGGC‑AGC‑AAA‑GCGTTTTTACACTGTTTCGCCGGTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGGCTTTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCGTTAACCGCCGGAGATTGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGTGCTATGTCt < 1:103475/238‑1 (MQ=255)
cGATTTCTTTGTCTG‑GACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGTGCTATGTCTTCCAt < 1:955800/238‑1 (MQ=255)
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GTTCTTCTTTAATCTCAAGGGACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTA‑CCGCCGCG‑CATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGA‑TGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTA‑TTTCAAACAGGCCGAAGGCGATTTCTTTGTCTG‑TACGCCGGAGGAAGGC‑AGC‑AAA‑GCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGT‑CGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGTGCTATGTCTTCCAT > NC_000913/2223196‑2223670
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
