Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,974,174 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,974,1740GC98.6% 677.0 / NA 288intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (116/168);  minor base A (3/1);  total (119/169)
Fisher's exact test for biased strand distribution p-value = 3.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,974,1750CG100.0% 684.5 / NA 288intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (119/169);  total (119/169)
*CP0425831,974,1760TA99.3% 672.1 / NA 288intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (116/168);  minor base G (1/1);  total (119/169)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 289 total aligned reads displayed.

CTTTCGCGCCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTGCTGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCAAAACGATACGGAAA  >  CP042583/1973894‑1974456
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                        
     gcgcCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATAcagca                                                                                                                                                                                                                                                                               <  2:1804472/289‑1 (MQ=255)
           tAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTg                                                                                                                                                                                                                                                                           >  1:1220938/1‑287 (MQ=255)
               gcgccatgaccTGGAAACGCCCTTTCAGAATTGTGTTGTGCAGGGCCGCGTTCTCGGAAGACGCCAGACGTTGCGGCATCCAGTCGAGGGACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGt                                                                                                                                                                                                                                                                      <  2:2000352/279‑1 (MQ=255)
               cggcAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGt                                                                                                                                                                                                                                                                      <  1:1999671/288‑1 (MQ=255)
                 gcAACGCCCGGGGGACGACTTTTTGTAATGGTGTTTTGGCGCGCCCGGTTCGCGTGAGACGCCAGGCGGTTCGGAGTCCAGGCGGGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGGTGGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGGAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTg                                                                                                                                                                                                                                                                    <  2:44269/288‑1 (MQ=255)
                   aaCGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAAAAACGGGCGAAATATACAGCCGGTGACTGTTGaag                                                                                                                                                                                                                                                                 >  2:975478/1‑287 (MQ=255)
                   aaCGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGGGCATACGGAAACCAGTGATGGCTTCCACCAGATCGTAAATTTTCTGACGATCGTTAAAGGCGAAGAACACTGGCGTCATTGCACCGACGTCCTGAAGAAAGGTAGAGATATACAGCAGGTTACTggtttt                                                                                                                                                                                                                                                                  >  2:1902939/1‑283 (MQ=255)
                    aagCCCTGTGAACGACCTGTCAGAATGGAGTTTTGCAGCGCCGCATTCTCGCAAGACGCCAGACGTGTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAAGAAAGGTCGAGATATACAGCAGGTGACTGTTGATg                                                                                                                                                                                                                                                                 <  1:739075/286‑1 (MQ=255)
                        ccTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGGCGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGaa                                                                                                                                                                                                                                                            <  2:250925/289‑1 (MQ=255)
                        ccTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGaa                                                                                                                                                                                                                                                            <  2:389651/289‑1 (MQ=255)
                        ccTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGa                                                                                                                                                                                                                                                             <  1:654913/288‑1 (MQ=255)
                          tGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGCAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAAAAAAGGTCGCGATATACAGCAGGTGACTGTTGATGCGGaaac                                                                                                                                                                                                                                                          >  2:1747206/1‑287 (MQ=255)
                                cGACCTTTCAGAATGTGGTTTTGCGGGGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCAAGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCgg                                                                                                                                                                                                                                                    <  2:1002499/289‑1 (MQ=255)
                                cGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCgg                                                                                                                                                                                                                                                    >  1:1057775/1‑289 (MQ=255)
                                 gACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGga                                                                                                                                                                                                                                                   <  1:1630867/289‑1 (MQ=255)
                                 gACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGga                                                                                                                                                                                                                                                   <  1:750907/289‑1 (MQ=255)
                                  aCCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGa                                                                                                                                                                                                                                                             >  1:2154965/1‑278 (MQ=255)
                                  aCCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGa                                                                                                                                                                                                                                                             <  2:2154965/278‑1 (MQ=255)
                                  aCCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGgag                                                                                                                                                                                                                                                  >  2:1201799/1‑289 (MQ=255)
                                      ttCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCa                                                                                                                                                                                                                                              >  1:1192315/1‑289 (MQ=255)
                                       tCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCAt                                                                                                                                                                                                                                             <  1:1406124/289‑1 (MQ=255)
                                        cAGAATGGTGTTTTGCAGGGCCGCTTTCTCGTAAGACGCCAGCCGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATg                                                                                                                                                                                                                                                                 <  1:972165/268‑1 (MQ=255)
                                                tgtTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGaa                                                                                                                                                                                                                                     <  1:1122895/288‑1 (MQ=255)
                                                  ttttGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATg                                                                                                                                                                                                                                   >  1:394208/1‑288 (MQ=255)
                                                          cgccgcTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATaa                                                                                                                                                                                                                                           >  1:880282/1‑272 (MQ=255)
                                                          cgccgcTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAAc                                                                                                                                                                                                                           >  1:915795/1‑288 (MQ=255)
                                                                 ttCACGTAAGACGCCAGACGTTTCGGCAGCCGGGCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCg                                                                                                                                                                                                                   <  2:1259939/289‑1 (MQ=255)
                                                                  tctcGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCgg                                                                                                                                                                                                                  <  1:1118082/289‑1 (MQ=255)
                                                                  tctcGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCgg                                                                                                                                                                                                                  <  1:529757/289‑1 (MQ=255)
                                                                         aGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTg                                                                                                                                                                                                           >  1:1552840/1‑289 (MQ=255)
                                                                            cGCCAGGCGTTTGGGCAGCCAGTCGGGGAACTCACGCAGCAGGCGAGCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTCACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATc                                                                                                                                                                                                        <  2:1640889/289‑1 (MQ=255)
                                                                                  aCGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGcc                                                                                                                                                                                                  >  1:1726525/1‑289 (MQ=255)
                                                                                      ttCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGTTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGt                                                                                                                                                                                                                               >  1:814290/1‑256 (MQ=255)
                                                                                      ttCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTTACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTTCATAAAGGTCGAGATATACAGCAGGTTACTGTTGATGCGGAACCGTTCGGAGAGCATCACGCGAATGACGTTAACGCGATCCGGCCCGGTGATCCCGGCCAGtt                                                                                                                                                                                              >  2:2074638/1‑289 (MQ=255)
                                                                                      ttCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGtt                                                                                                                                                                                              <  1:2254748/289‑1 (MQ=255)
                                                                                                aGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCCCGGTTATCCCGGCCAGTTTCTCTAccc                                                                                                                                                                                     >  2:2230645/1‑287 (MQ=255)
                                                                                                   cGAGGAACTCACGCAGCAGGCGATCCCGGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCa                                                                                                                                                                                  <  1:1267202/288‑1 (MQ=255)
                                                                                                                     ggCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAAcg                                                                                                                                                                                                                          <  1:426904/230‑1 (MQ=255)
                                                                                                                        gATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTaa                                                                                                                                                             <  2:1157303/288‑1 (MQ=255)
                                                                                                                         aTCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTc                                                                                                                                                                  >  1:1711129/1‑282 (MQ=255)
                                                                                                                          tCCCAGCCGCGCGGCAGGTGGCGCGCTACGCCGCCAAAACGGAACCACGAC‑GGGTGCATAAGGAAACCAGTGATTGCTTCCACCAGGTCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGc                                                                                                                                                          <  2:1066791/289‑1 (MQ=255)
                                                                                                                           cccAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCa                                                                                                                                                         >  1:1592165/1‑289 (MQ=255)
                                                                                                                           cccAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGCTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCa                                                                                                                                                         <  1:1454698/289‑1 (MQ=255)
                                                                                                                             cAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGt                                                                                                                                                                                                                                                                            >  2:1304026/1‑172 (MQ=255)
                                                                                                                             cAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAgc                                                                                                                                                       <  1:594100/289‑1 (MQ=255)
                                                                                                                                  gcgcgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGccgccg                                                                                                                                                  <  2:277762/289‑1 (MQ=255)
                                                                                                                                   cgcgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGa                                                                                                                                                 >  1:498931/1‑289 (MQ=255)
                                                                                                                                     cgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTACATTTTCTTACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGCTGATGCGTACCAGTTCGGGGCGCATAACCCGAATGTCGTTACCGCGCTCCGGGCCGGGGATCCCGGCCAGTTTCTCTACCCCCAGCACGTAAGGCATTTCCTTAACGACGCCCCCGacg                                                                                                                                               >  2:1597471/1‑287 (MQ=255)
                                                                                                                                     cgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATc                                                                                                                                                                                                        <  2:1077693/232‑1 (MQ=255)
                                                                                                                                             cGTGCGCTCCGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGAt                                                                                                                                       <  1:2110941/289‑1 (MQ=255)
                                                                                                                                                gcgcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATAc                                                                                                                                     <  1:1460167/288‑1 (MQ=255)
                                                                                                                                                gcgcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATAc                                                                                                                                     <  2:840564/288‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  1:711393/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  1:307604/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  1:2217954/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  1:1526478/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  2:893719/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCAACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                                   <  1:1252852/288‑1 (MQ=255)
                                                                                                                                                  ccTAAGCCGCCAAAACCGAACACCGCC‑GAGTGCCAACGGAAACCAGTGATTGCGTCCACCAGATGGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGAAGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                                   <  2:501695/287‑1 (MQ=255)
                                                                                                                                                   gtgaggccgcAACACGGAAACCCGGCGGGGTGCATACGGAAACCAGTGATTGCTTCAACCAGATCGAAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCGGACGTCCTGAATAAAGGTAGAGATATACAGCAGGTGACTATTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  2:1719099/280‑1 (MQ=255)
                                                                                                                                                   cTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  1:1144962/288‑1 (MQ=255)
                                                                                                                                                   cTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  2:1238199/288‑1 (MQ=255)
                                                                                                                                                    tACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCa                                                                                                                                <  2:1057775/289‑1 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGga                                                                                                                                                                                                                                                   <  2:752818/172‑1 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAAt                                                                                                                                                                                                                                    <  1:473933/187‑1 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAAt                                                                                                                                                                                                                                    >  2:473933/1‑187 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCGGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGt                                                                                                                              >  1:1291730/1‑289 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  >  2:1459282/1‑285 (MQ=255)
                                                                                                                                                                   gAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTAGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGAGCTCGGCAAGTTTCTCTa                                                                                                                                                                                        >  2:1425824/1‑218 (MQ=255)
                                                                                                                                                                         cGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCa                                                                                                                                                                                  <  1:562483/218‑1 (MQ=255)
                                                                                                                                                                         cGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTAt                                                                                                                                            <  2:151515/256‑1 (MQ=255)
                                                                                                                                                                         cGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGc                                                                                                           <  2:523356/289‑1 (MQ=255)
                                                                                                                                                                         cGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTGTCTGACGTGCGGTAAAGGCGAAGAACACTGGCGTCAGTGCGCCGACGTCCTGAATAAAGGTCGGGATATACAGCAGGTGACTGTTGGTGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCGCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGGTACGGTCAGTATACGGAATGTAGCTGTGc                                                                                                           <  2:716254/289‑1 (MQ=255)
                                                                                                                                                                               ggTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAg                                                                                                                                                >  2:2049548/1‑247 (MQ=255)
                                                                                                                                                                               ggTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAg                                                                                                                                                <  1:2049548/247‑1 (MQ=255)
                                                                                                                                                                               ggTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAgg                                                                                                       >  1:1512462/1‑288 (MQ=255)
                                                                                                                                                                                         gAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                                   <  1:445565/250‑1 (MQ=255)
                                                                                                                                                                                                gTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAAcg                                                                                                                                                                                                                          >  1:1902277/1‑156 (MQ=255)
                                                                                                                                                                                                 tGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  <  2:1683679/243‑1 (MQ=255)
                                                                                                                                                                                                 tGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                                  >  1:1683679/1‑243 (MQ=255)
                                                                                                                                                                                                      gCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTATCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCg                                                                               <  1:2062610/289‑1 (MQ=255)
                                                                                                                                                                                                        ttCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAg                                                                                                                 <  2:134617/253‑1 (MQ=255)
                                                                                                                                                                                                        ttCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAg                                                                                                                 >  1:134617/1‑253 (MQ=255)
                                                                                                                                                                                                         tCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCAt                                                                                                                                                                     >  2:426753/1‑200 (MQ=255)
                                                                                                                                                                                                         gaccccagctgttAAATTTTCGAACGACAGGTAAAGGCGAAGAACAATGGCGTGATTGCGCCGCCGTCCTGAAAGAAGGTCGAGATATACATCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAAGGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGcac                                                                            <  2:356271/277‑1 (MQ=255)
                                                                                                                                                                                                                 aTCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATAc                                                                                                                                     >  2:1964044/1‑224 (MQ=255)
                                                                                                                                                                                                                 aTCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACggtgg                                                                    >  2:123058/1‑289 (MQ=255)
                                                                                                                                                                                                                            tCTGACGATCGGTACAGGCGAAGACAACGTGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGGTCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGAt                                                         <  2:490704/289‑1 (MQ=255)
                                                                                                                                                                                                                            tCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGAt                                                         <  2:1114401/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  gaaCACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACaa                                     >  1:935829/1‑287 (MQ=255)
                                                                                                                                                                                                                                                  gaaCACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAAt                                    >  2:919375/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      acTCGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCGTAACGCGAATGACGTTAACGCTATCCGGCACGGTGATCCCGGCCAGGTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATCCGGTCAGTATACGGAATGTAGCCGTGCCAGGAGTTGCCTTCGCCCATTTTCTCCGCACCCCGGTGGTGGTAACCGCTGCCTGGCACCGAGTCGCCactacct                                >  2:149185/1‑282 (MQ=255)
                                                                                                                                                                                                                                                        tGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGc                                                                                                                                                          >  1:375685/1‑164 (MQ=255)
                                                                                                                                                                                                                                                           cGTCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTtctc                                                                                 <  1:1954173/234‑1 (MQ=255)
                                                                                                                                                                                                                                                             tCATTGCGCCGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCCTTTTCTCCGCCCCCCGGTGGGGGTAACCGATGTTTGGTACGCAGTCGAGCATCTCTTCGCCAt                         >  2:572115/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     ccGACGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCa                >  1:1002426/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         cGTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCaaaa             <  1:1092469/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gTCCTGAATAAAGGTCGAGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCAAAACg           <  2:627409/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ccggAATAAAGGTCGAGATAGACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCAAAACGAt         <  1:1823177/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   agagtgtgtGAGATAAAGAAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACCGTAACGCGATCCGGCCCGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCAAAACGATACGGaaa  <  2:547162/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                        
CTTTCGCGCCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCC‑GGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTGCTGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCAAAACGATACGGAAA  >  CP042583/1973894‑1974456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A