Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,973,358 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,973,3580AT98.4% 587.0 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (112/132);  minor base G (0/4);  total (113/136)
Fisher's exact test for biased strand distribution p-value = 1.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,973,3590CG99.6% 587.1 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (112/136);  minor base T (1/0);  total (113/136)
Fisher's exact test for biased strand distribution p-value = 4.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,973,3600TA99.6% 593.2 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (112/136);  minor base C (1/0);  total (113/136)
Fisher's exact test for biased strand distribution p-value = 4.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 249 total aligned reads displayed.

ACATGGCGACCAACCGGCTGGCGGAAGATCTGACTGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCACTCATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCAGCTCACTTGCAGGAAGTGGGTGATCAGGGTTTCGATATGTTGCAGCGTGCGCTCTTTCGGCG  >  CP042583/1973078‑1973638
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
caaTGGCGACCAACCGGCTAGCGTAAGATCGGACTTTAGACGGTTGCACCGCCGTCGACGTCGCTGGCCGAAATACCCAGCACTGCGGGGATCGCGTGGATCGCACCATCCGGCACCCTGCCACGCTGCTTGTGAACGATTTTCAGCTCTTCAATGGACGCCGAACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAAc                                                                                                                                                                                                                                                                                  <  2:61407/287‑1 (MQ=255)
accggtcGACCACCCGCCTGGCGGAAGCTCTGACTGCAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAAc                                                                                                                                                                                                                                                                                  <  2:1255291/283‑1 (MQ=255)
acaTGGCGACCAACCGGCTGGCGGAAGATCTGACTGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAAc                                                                                                                                                                                                                                                                                  <  2:385240/289‑1 (MQ=255)
acaTGGCGACCAACCGGCTGGCGGAAGATCTGACTGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAAc                                                                                                                                                                                                                                                                                  <  1:1473087/289‑1 (MQ=255)
        aCCAACCGGCTGGCGGAAGATCTGACTGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGa                                                                                                                                                                                                                                                                          >  1:1886973/1‑289 (MQ=255)
        aCCAACCGGCTGGCGGAAGATCTGACTGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGGAGTGGTGCATCTCGTGCTCGATCGCTTCACGCGCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAACTAGCGGTCCCCACCCGCCTTAACaaaacaca                                                                                                                                                                                                                                                                          >  2:1123186/1‑285 (MQ=255)
                tcTGGCGGAAGATCTGCCTGTAGAACGTGGCCACCCCTTCGACGTCGCTTGCCGGAATACCCAGCCCATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGcc                                                                                                                                                                                                                                                                   <  2:638793/287‑1 (MQ=255)
                 atGGCGGAAACACTGACCGTCGAACGTGGCCCAGCCTTCGACGTCCCTTGCAGGAAGACCCAGCACATCGGCGATCGCGTGGGTCGCACACTCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGccc                                                                                                                                                                                                                                                                  <  2:323470/287‑1 (MQ=255)
                  gggCGGAAGAGCTGACTGTAGAACGTTGCCACACCTTCGGCGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCa                                                                                                                                                                                                                                                                 <  2:1019436/287‑1 (MQ=255)
                            tcggccggTAGAACGTGGCCACACCTGCGGCGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAAt                                                                                                                                                                                                                                                       <  2:1203749/281‑1 (MQ=255)
                            tCTGACGGTAGAACGTTGCCACTCCTTCTACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCTTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATc                                                                                                                                                                                                                                                      <  1:1299014/289‑1 (MQ=255)
                                 cTGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTc                                                                                                                                                                                                                                                 <  1:270843/289‑1 (MQ=255)
                                  tGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCa                                                                                                                                                                                                                                                <  2:1703433/289‑1 (MQ=255)
                                          gTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAg                                                                                                                                                                                                                                        >  2:992844/1‑289 (MQ=255)
                                            tGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAg                                                                                                                                                                                                                                        >  1:1359101/1‑287 (MQ=255)
                                              ccACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCt                                                                                                                                                                                                                                     >  1:1615195/1‑288 (MQ=255)
                                                      tCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAgg                                                                                                                                                                                                                                       >  1:505300/1‑278 (MQ=255)
                                                      tCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGa                                                                                                                                                                                                                             >  1:916523/1‑288 (MQ=255)
                                                      tCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCCGCCGCACTCAGCTCAAAAGCCGCGGTTTGCGGTTGTTGATTCTCGTGCATCATTAGCGGTCCACATCTTACCTAAAAAAAGTGACTCTGCCCAATTAACCAATCAATTCAAACACCCGTCTACCGCGGa                                                                                                                                                                                                                             >  2:1392654/1‑288 (MQ=255)
                                                      tCGACGTCGCGTGCCGGAATCGACAGCACATCGGCGCTCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGAt                                                                                                                                                                                                                            <  2:1478207/289‑1 (MQ=255)
                                                             cGCTTGCCGGAACACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCgccgcc                                                                                                                                                                                                                     >  1:542210/1‑289 (MQ=255)
                                                              gCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGccgccg                                                                                                                                                                                                                    >  1:1715593/1‑289 (MQ=255)
                                                                                 ccaTCGGGGACCGCGGGGCTCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATgcgc                                                                                                                                                                                                 <  2:1043801/288‑1 (MQ=255)
                                                                                  cctCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCa                                                                                                                                                                                                <  1:1645466/287‑1 (MQ=255)
                                                                                   aTCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGCCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCaa                                                                                                                                                                                               >  2:1461413/1‑289 (MQ=255)
                                                                                   aTCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGAAGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTCGATTCTCGCGCATAATTAGCCGTCCACATCTGACATAACAAAATCGATACTGCCCAACTAAAAACTCAGATCACACACCACGCCGCCGCGGCACGCCGCCGGAATTGGCTGCAAATggccaa                                                                                                                                                                                               >  2:525337/1‑284 (MQ=255)
                                                                                     cGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCaaa                                                                                                                                                                                              >  2:695916/1‑288 (MQ=255)
                                                                                        cGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCt                                                                                                                                                                                           <  1:316788/288‑1 (MQ=255)
                                                                                        cGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCt                                                                                                                                                                                           <  2:820752/288‑1 (MQ=255)
                                                                                         gATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTc                                                                                                                                                                                          <  1:785477/288‑1 (MQ=255)
                                                                                          aTCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCGGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCgg                                                                                                                                                                                        >  2:485204/1‑289 (MQ=255)
                                                                                             gcgTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGt                                                                                                                                                                                     >  1:932248/1‑289 (MQ=255)
                                                                                                     cGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGa                                                                                                                                                                                                                                                                          <  2:548203/196‑1 (MQ=255)
                                                                                                     cGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGa                                                                                                                                                                                                                                                                          >  1:548203/1‑196 (MQ=255)
                                                                                                        aCCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACggg                                                                                                                                                                          <  1:1619864/289‑1 (MQ=255)
                                                                                                          cgtCCGGCGCCCCGCCAGGCTGCTTCTGAACGGTTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTg                                                                                                                                                                        <  2:1949532/287‑1 (MQ=255)
                                                                                                          cATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTg                                                                                                                                                                        <  2:1197024/289‑1 (MQ=255)
                                                                                                            tCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCg                                                                                                                                                                      <  2:1359101/289‑1 (MQ=255)
                                                                                                             ccGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCgg                                                                                                                                                                     >  2:1738903/1‑289 (MQ=255)
                                                                                                              cGGCACCCGGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGt                                                                                                                                                                    <  1:1116819/289‑1 (MQ=255)
                                                                                                                 cACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATa                                                                                                                                                                                                                                                                        <  1:1057040/186‑1 (MQ=255)
                                                                                                                  aCCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAAAACGGGTGCGGTAAc                                                                                                                                                                 >  1:294071/1‑288 (MQ=255)
                                                                                                                    ccAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCa                                                                                                                                                              <  2:916523/289‑1 (MQ=255)
                                                                                                                    ccAGCAACGCTGCGTCTGAACGATTTTCAGCTCTGCAATGGAGGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCAATCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCGGACATAACAAAATCGATACTGCCCAGATAAACAAGCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCa                                                                                                                                                              <  2:1155325/289‑1 (MQ=255)
                                                                                                                      aGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGcc                                                                                                                                                                                                                                                                   >  1:841922/1‑186 (MQ=255)
                                                                                                                         cACGCTGCTTCTGAACGATTTTCGGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGtg                                                                                                                                                         <  1:47929/289‑1 (MQ=255)
                                                                                                                                  tCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGcc                                                                                                                                                                                                                                                                   >  1:1564124/1‑174 (MQ=255)
                                                                                                                                  tCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCAGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTAAGAACACGGGCGCGGTAACTAAGGGTGCTGCCggc                                                                                                                                                 >  2:1642375/1‑286 (MQ=255)
                                                                                                                                   cTGAGCGCTTGTCAGCGCTTGAATGGACGCCGCACGCGTGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGc                                                                                                                                               <  1:1547140/289‑1 (MQ=255)
                                                                                                                                      aaCGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTAAGAACACCGGGGCGGTAACTCATGGGGCTGCCGTCggcgg                                                                                                                                            >  2:510460/1‑285 (MQ=255)
                                                                                                                                       aCGAGTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGt                                                                                                                                           <  2:1571933/289‑1 (MQ=255)
                                                                                                                                        ggatctacAGCGCTTTAATGGACGCCGCGCGCGGGGCTTCGGAGTGGGGCAGCTCAGGCTCGATCGCGTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTGGATTCTCGTGCATAATTAGCGGTCCACATCGGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGt                                                                                                                                           <  2:514055/281‑1 (MQ=255)
                                                                                                                                                  cgcTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTaa                                                                                                                                 <  1:1838050/288‑1 (MQ=255)
                                                                                                                                                     ttCGATGGACGCCGCGCGCGGGTTTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTACAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTg                                                                                                                              <  2:1870063/288‑1 (MQ=255)
                                                                                                                                                     ttCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACGCATGGTGCGGCCGTCGCTGGCCAGGTAGTAACCGt                                                                                                                             >  2:50208/1‑289 (MQ=255)
                                                                                                                                                        aaTGGACGTCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCACTGCCGCACTCAGCTCAAAAGGCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGa                                                                                                                          <  1:1268905/289‑1 (MQ=255)
                                                                                                                                                               gccgcACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGt                                                                                                                                           <  2:131980/265‑1 (MQ=255)
                                                                                                                                                               gccgcACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGt                                                                                                                                           >  1:131980/1‑265 (MQ=255)
                                                                                                                                                               gccgcACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCttt                                                                                                                   >  1:1159577/1‑289 (MQ=255)
                                                                                                                                                                  gcACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGt                                                                                                                <  1:1123186/289‑1 (MQ=255)
                                                                                                                                                                          gTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCa                                                                                                         <  1:1020517/288‑1 (MQ=255)
                                                                                                                                                                                    tggtgCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGaa                                                                                              >  2:1001689/1‑289 (MQ=255)
                                                                                                                                                                                     ggtgCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGa                                                                                               <  1:697250/287‑1 (MQ=255)
                                                                                                                                                                                      gtgactcccGTGCTCGGTAGGTTACCGCTCTGCCGCACGAGTCTCAAAGGCCTCGGTTTGTTGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGaaa                                                                                             <  2:108538/280‑1 (MQ=255)
                                                                                                                                                                                       tgCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGa                                                                                           >  1:760221/1‑289 (MQ=255)
                                                                                                                                                                                         cATCTCGTGCTCGATCGCTTCCCGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGGAGTAACTGTTGATCCCTTTGGTCGCCTCCATCCTCTGGACAGAt                                                                                          >  2:1855703/1‑288 (MQ=255)
                                                                                                                                                                                         cATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGAt                                                                                          >  1:1169960/1‑288 (MQ=255)
                                                                                                                                                                                         cATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGAt                                                                                          >  1:113390/1‑288 (MQ=255)
                                                                                                                                                                                           tctcGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCa                                                                                       >  1:883728/1‑289 (MQ=255)
                                                                                                                                                                                           tctcGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGGCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTTGCCTCCATCCTCTGGAAAggatca                                                                                       >  2:278304/1‑284 (MQ=255)
                                                                                                                                                                                              cGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATACATTg                                                                                    >  2:754637/1‑289 (MQ=255)
                                                                                                                                                                                               gTGCTCGTTCGCCTCCCGCTCTGCCGAACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTgg                                                                                   <  2:113390/289‑1 (MQ=255)
                                                                                                                                                                                               gTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTg                                                                                    >  1:496961/1‑288 (MQ=255)
                                                                                                                                                                                                tGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTggc                                                                                  >  2:854627/1‑289 (MQ=255)
                                                                                                                                                                                                    cGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTggcaggc                                                                              <  1:38778/289‑1 (MQ=255)
                                                                                                                                                                                                      aTCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGTAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGgtagta                                                                                                                                  >  2:235952/1‑235 (MQ=255)
                                                                                                                                                                                                      aTCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGgtagta                                                                                                                                  <  1:235952/235‑1 (MQ=255)
                                                                                                                                                                                                          cTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACCCGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCGGGAAAGATTCATGggcagtaatcca                                                                         >  2:339073/1‑281 (MQ=255)
                                                                                                                                                                                                          cTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCAcc                                                                        >  2:411294/1‑289 (MQ=255)
                                                                                                                                                                                                                   ctGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGgtagt                                                                                                                                   >  1:980334/1‑221 (MQ=255)
                                                                                                                                                                                                                    tGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGCTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCacg                                                              >  1:1741695/1‑287 (MQ=255)
                                                                                                                                                                                                                     gCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCacga                                                             <  1:1436827/289‑4 (MQ=255)
                                                                                                                                                                                                                     gCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCacg                                                              >  1:1028891/1‑286 (MQ=255)
                                                                                                                                                                                                                       cGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCacgaca                                                           <  1:411294/289‑6 (MQ=255)
                                                                                                                                                                                                                       cGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCacgaca                                                           <  1:715440/289‑6 (MQ=255)
                                                                                                                                                                                                                       cGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGAAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCGGGAAAGATTCATTGTGAGGCATCACCGGACCCCacgaca                                                           <  1:1736139/289‑6 (MQ=255)
                                                                                                                                                                                                                            tCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGc                                                      <  2:707057/289‑1 (MQ=255)
                                                                                                                                                                                                                                ctccaaggcgccGGTTTTTGTTTGTTTATTCTAGGGCATAATAAGCGGTAACCATCGGACATAACAAAACCGATACTGCCCGGAGAAACAATCAGGTCCGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGa                                                  <  2:1384984/278‑1 (MQ=255)
                                                                                                                                                                                                                                    aaaGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTg                                              <  1:118330/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ttgttgATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTGGGTGATCAGGGTTTCg                              <  1:1001689/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     ttgttgATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTGGGTGATCAGGGTTTCg                              <  1:510460/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     ttgttgATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTGGGTGATCAGGGTTTCg                              <  1:627/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      tgttgATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTGGGTGATCAGGGTTTCGat                            <  2:760221/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       gttgATTCTCGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTgg                                                                                   >  2:161883/1‑233 (MQ=255)
                                                                                                                                                                                                                                                               tcGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTaa                                                                                                                                 <  1:684641/179‑1 (MQ=255)
                                                                                                                                                                                                                                                               tcGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTGGGTGATCAGGGTTTCg                              <  2:1551740/278‑1 (MQ=255)
                                                                                                                                                                                                                                                               ccGTGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTACCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCCAAGCTCGGGGTACGAACACGGGTGCGGTACCTAAAGATCATGCCGACGCTGGCCAGTTAGTAACTGTAGATCCCTTAGGTCGTCCCACTCATCTGGAAAGAATCATTGGCAGGCATCACGGGACCAAACGACCCTTGCAGGCAGCGGGTGATAAGGGTCTCggacggatggag                   >  2:1037026/2‑278 (MQ=255)
                                                                                                                                                                                                                                                                  tGCATAATTAGCGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAg                                                                                                                                        <  2:275570/169‑1 (MQ=255)
                                                                                                                                                                                                                                                                             cGGTCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTGGGTGATCAGGGTTTCGATATGTTGCAGCGTGCGCTCTTTcg     >  2:1251315/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                tCCACATCTGACATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCACGACACTTGCAGGAAGTGGGTGATCAGGGTTTCGat                            <  1:1041137/263‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
ACATGGCGACCAACCGGCTGGCGGAAGATCTGACTGTAGAACGTTGCCACACCTTCGACGTCGCTTGCCGGAATACCCAGCACATCGGCGATCGCGTGGATCGCACCATCCGGCACCCAGCCACGCTGCTTCTGAACGATTTTCAGCGCTTCAATGGACGCCGCACGCGGGTCTTCGTAGTGGTGCATCTCGTGCTCGATCGCTTCACGCTCTGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGTTGATTCTCGTGCATAATTAGCGGTCCACATCACTCATAACAAAATCGATACTGCCCAGATAAACAATCAGGTCAGACACCAGGCTGCCGCGGATCGCCGCCGGAATTTGCTGCAAATGCGCAAAGCTCGGGGTACGAACACGGGTGCGGTAACTCATGGTGCTGCCGTCGCTGGTCAGGTAGTAACTGTTGATCCCTTTGGTCGCCTCAATCATCTGGAAAGATTCATTGGCAGGCATCACCGGACCCCAGCTCACTTGCAGGAAGTGGGTGATCAGGGTTTCGATATGTTGCAGCGTGCGCTCTTTCGGCG  >  CP042583/1973078‑1973638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A