Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,974,174 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,974,1740GC99.0% 700.6 / NA 298intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base C (130/165);  total (130/168)
Fisher's exact test for biased strand distribution p-value = 2.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,974,1750CG99.3% 699.6 / NA 298intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (130/166);  total (130/168)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,974,1760TA99.7% 695.0 / NA 298intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (130/167);  minor base G (0/1);  total (130/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

Only 100 of 298 total aligned reads displayed.

CTTTCGCGCCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTGC‑TGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCAAAACGAT  >  CP042583/1973894‑1974449
                                                                                                                                                                                                                                                                                        ||||                                                                                                                                                                                                                                                                                 
ctTTCGCGCCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGAtata                                                                                                                                                                                                                                                                             <  1:1886953/289‑1 (MQ=255)
ctTTCGCGCCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGAtata                                                                                                                                                                                                                                                                             >  1:935832/1‑289 (MQ=255)
   tCGCGCCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATAcag                                                                                                                                                                                                                                                                          <  1:644387/289‑1 (MQ=255)
   tCGCCCCATGGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGAAGCGCGGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCAATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATAcag                                                                                                                                                                                                                                                                          <  2:339845/289‑1 (MQ=255)
        ccATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGt                                                                                                                                                                                                                                                                     <  2:1316483/289‑1 (MQ=255)
                   aaCGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATCAAGGTCG‑AGATATACAGCAGGTGACTGTTGAt                                                                                                                                                                                                                                                           >  1:1871547/1‑288 (MQ=255)
                     cGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTTGCGTCATTGCGCCGACGGCCCGAATAAAGGTCG‑AGATATACACCAGGTGAccggttagccg                                                                                                                                                                                                                                                        >  2:2713123/1‑279 (MQ=255)
                       cccTGGGAACGACCTTTCAGAATGGTGTGTGGCAGCGCCGCGTTCTCGTAAGACGCCAGACGTTGCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGa                                                                                                                                                                                                                                                      <  2:1561225/289‑1 (MQ=255)
                            ggAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAAAACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGAGATACAGCAGGTGAATTTTGATGCGGAAcgcg                                                                                                                                                                                                                                                 >  2:1962252/1‑286 (MQ=255)
                                  aCCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGGCATTGCGCCGCCGTCCTGAATAAAGGTCG‑AGATATACAGCAGGGGACTGTTGAGTCGGacacggtcgaag                                                                                                                                                                                                                                           >  2:763046/1‑278 (MQ=255)
                                           aaTGGTGTTTGGCGGGGCCCCTCTCCCGTAAGACGCCGGACGTGTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATaa                                                                                                                                                                                                                                    <  2:2382234/287‑1 (MQ=255)
                                                tgtTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGga                                                                                                                                                                                                                                            >  1:1782856/1‑274 (MQ=255)
                                                 gtTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAAt                                                                                                                                                                                                                             <  1:518043/288‑1 (MQ=255)
                                                  ttttGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGt                                                                                                                                                                                                                                                               >  2:920875/1‑253 (MQ=255)
                                                          cgccgcTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATg                                                                                                                                                                                                                                                          <  1:1178108/250‑1 (MQ=255)
                                                            ccgcTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAAcgcg                                                                                                                                                                                                                 <  1:556381/289‑1 (MQ=255)
                                                               cTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGTCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGTGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGAt                                                                                                                                                                                                               >  1:2151091/1‑288 (MQ=255)
                                                                  tctcGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCgg                                                                                                                                                                                                           <  1:2173096/289‑1 (MQ=255)
                                                                  tctcGTAAGACGCCAGACGGTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGACAATACGGAACCACGCCGGGTGCAGACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGGCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCgg                                                                                                                                                                                                           <  2:2355593/289‑1 (MQ=255)
                                                                            cGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACa                                                                                                                                                                                                                                                   >  2:1163236/1‑239 (MQ=255)
                                                                                  aCGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGt                                                                                                                                                                                                                                                               >  2:1997458/1‑221 (MQ=255)
                                                                                  aCGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGt                                                                                                                                                                                                                                                               <  1:1997458/221‑1 (MQ=255)
                                                                                                  tCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGcc                                                                                                                                                                            >  2:950756/1‑288 (MQ=255)
                                                                                                          cTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTaa                                                                                                                                                                   <  2:552583/289‑1 (MQ=255)
                                                                                                            cACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGAtata                                                                                                                                                                                                                                                                             >  2:1080643/1‑181 (MQ=255)
                                                                                                               gcagctGGCGGGCCCAGCCGGGCGGCAGGGCCGGCGCTACGCCACCGATACGGCACCCCGCCGGGTTCATACGGGTACCAGTGATTTCTTCCACCAGATCTTAAATGTTCTTACGATCGGTAAAGGCGGAGAGCACTGGCGGCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACCGCAGGTGACTGTTGATGCGGAACAGTTCGGAGCGCATAGCGCGAATGACGTTAACACGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCAt                                                                                                                                                              <  2:181132/289‑1 (MQ=255)
                                                                                                               gcagcaGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCAt                                                                                                                                                              <  1:2255616/289‑1 (MQ=255)
                                                                                                                  gcagGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGga                                                                                                                                                                                                                                            >  1:1907371/1‑208 (MQ=255)
                                                                                                                  gcagGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGga                                                                                                                                                                                                                                            <  2:1907371/208‑1 (MQ=255)
                                                                                                                   cagGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCg                                                                                                                                                          >  2:495324/1‑289 (MQ=255)
                                                                                                                           cccAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCa                                                                                                                                                  >  2:2253348/1‑289 (MQ=255)
                                                                                                                           cccAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCa                                                                                                                                                  <  1:2582381/289‑1 (MQ=255)
                                                                                                                                ccGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAgccg                                                                                                                                              >  1:1594126/1‑288 (MQ=255)
                                                                                                                                   cgcgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATaa                                                                                                                                                                                                                                    >  1:1194123/1‑199 (MQ=255)
                                                                                                                                   cgcgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGc                                                                                                                                                   >  2:56887/1‑280 (MQ=255)
                                                                                                                                   cgcgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGc                                                                                                                                                   <  1:56887/280‑1 (MQ=255)
                                                                                                                                     cgGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAgg                                                                                                                                        >  1:1060815/1‑289 (MQ=255)
                                                                                                                                             tgggcgcGAAGCCGCCAAAACGGAACCACGCCGGTTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGAt                                                                                                                                <  2:301831/286‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGTTCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  1:1438449/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            <  1:2646696/288‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            <  1:1505296/288‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  1:1094900/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  2:408507/289‑1 (MQ=255)
                                                                                                                                                  gcTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  1:43326/289‑1 (MQ=255)
                                                                                                                                                  acgaCGCCGTCAATCAGTAACCACGCCGGAGGGATCAGGAAACCAGGTATTGCTGCCACCAGATCGGAAATATGTTGGCGATCGGTAAAGGCGAAGAAGACTGGCGTGTTTGCGCCGACGTCCCGAATAAGTGTCG‑GTATAGACTGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGGGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  2:1121516/286‑1 (MQ=255)
                                                                                                                                                    tACGCCGCAAATACGGAACCACTCCGGGTGCATACGGAAACCAGTGATTGCGTCAACCAGATCGAAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  2:1096646/287‑1 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTc                                                                                                                          >  2:252916/1‑286 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGt                                                                                                                       <  1:2235544/289‑1 (MQ=255)
                                                                                                                                                      cgccgcCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGt                                                                                                                       >  2:2439806/1‑289 (MQ=255)
                                                                                                                                                         cgccAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGCGGTATTCGATACGGTCAggaa                                                                                                                     >  2:798974/1‑285 (MQ=255)
                                                                                                                                                         cgccAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGtata                                                                                                                    <  1:18492/289‑1 (MQ=255)
                                                                                                                                                           ccAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACg                                                                                                                  >  1:1215799/1‑289 (MQ=255)
                                                                                                                                                                    aacaccGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCGGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         <  2:1861182/284‑1 (MQ=255)
                                                                                                                                                                    aaCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATGGTAAATTTTCTGACGATCGGTAAAGGGGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCAGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         <  2:1221279/289‑1 (MQ=255)
                                                                                                                                                                    aaCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAg                                                                                                          <  1:1540330/288‑1 (MQ=255)
                                                                                                                                                                    aaCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAg                                                                                                          <  1:2716914/288‑1 (MQ=255)
                                                                                                                                                                    aaCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAg                                                                                                          <  2:1203788/288‑1 (MQ=255)
                                                                                                                                                                     aCCGCGCCGGGTGCATACGGAACCCAGGGATTGCTTCAACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         <  1:2097142/288‑1 (MQ=255)
                                                                                                                                                                     aCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCCCGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCTGTGTACGGAATGTa                                                                                                           >  1:917647/1‑286 (MQ=255)
                                                                                                                                                                     aCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         <  1:1160480/288‑1 (MQ=255)
                                                                                                                                                                     aCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         <  2:2265224/288‑1 (MQ=255)
                                                                                                                                                                     aCCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         <  1:798974/288‑1 (MQ=255)
                                                                                                                                                                         cGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCAt                                                                                                                                                              >  2:2511414/1‑231 (MQ=255)
                                                                                                                                                                         cGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            >  2:1516890/1‑265 (MQ=255)
                                                                                                                                                                         cGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            >  1:2186516/1‑265 (MQ=255)
                                                                                                                                                                         cGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  2:1584922/266‑1 (MQ=255)
                                                                                                                                                                         cGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           >  1:1668589/1‑266 (MQ=255)
                                                                                                                                                                         cGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGAACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCtgtg                                                                                                     >  1:2616375/1‑288 (MQ=255)
                                                                                                                                                                              ggTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATAc                                                                                                                              <  1:2357006/258‑1 (MQ=255)
                                                                                                                                                                                    tACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTa                                                                                                                                                                    >  2:46811/1‑214 (MQ=255)
                                                                                                                                                                                    tACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTa                                                                                                                                                                    <  1:46811/214‑1 (MQ=255)
                                                                                                                                                                                      cagAAACCAGTGATTGCTGCCACCAGATCGTAAATTTTATGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGtt                                                                                       <  2:2573497/287‑1 (MQ=255)
                                                                                                                                                                                        gAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGAACGGTTATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCAGTTCGTTAACGCAGCCGCCGCGGTATTCGATACGGGCCGTATACGGAATGTAGCTGTGCCGTGAATGGCTTTc                                                                                      >  2:378061/1‑288 (MQ=255)
                                                                                                                                                                                          aaCCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            >  2:1185356/1‑248 (MQ=255)
                                                                                                                                                                                             cAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCAt                                                                                <  1:763046/289‑1 (MQ=255)
                                                                                                                                                                                             cAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCAAAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCAt                                                                                <  1:197218/289‑1 (MQ=255)
                                                                                                                                                                                             cAGGGATTGCTTCAACCAGATCTTAAATTTTCTGACGATCGGAAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCAt                                                                                <  2:1746304/289‑1 (MQ=255)
                                                                                                                                                                                                tGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            <  1:365593/242‑1 (MQ=255)
                                                                                                                                                                                                       ttCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATaa                                                                                                                                                                                                                                    <  1:2475459/131‑1 (MQ=255)
                                                                                                                                                                                                         ccaccaGATCGTAAATTTTCTGACGATCGTTAAAGGCGAAGAACACTGGCGTCATTGCTCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGGTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGcac                                                                     >  1:984444/1‑288 (MQ=255)
                                                                                                                                                                                                                aTCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            <  2:1017334/226‑1 (MQ=255)
                                                                                                                                                                                                                aTCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACgg                                                                                                                            >  1:1017334/1‑226 (MQ=255)
                                                                                                                                                                                                                aTCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGt                                                                                                                           <  2:1403253/227‑1 (MQ=255)
                                                                                                                                                                                                                aTCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGAGCCGGCACGGTGATCCCGGCCATTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCCGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCCCCACggtgg                                                             >  1:1386869/1‑289 (MQ=255)
                                                                                                                                                                                                                  cGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGtata                                                                                                                    >  2:901256/1‑232 (MQ=255)
                                                                                                                                                                                                                  cGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGtata                                                                                                                    <  1:901256/232‑1 (MQ=255)
                                                                                                                                                                                                                               aCGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATg                                                 >  2:1895084/1‑286 (MQ=255)
                                                                                                                                                                                                                                         aaGGCACAGAGCCCTGGCGTCATTGCGCCGACGTACGGGATAAA‑GTGCGAGATATACAGCAGGTGTCTGTTGATGCGGAACAGTTCGGGGGGCATAACGCGAAGGACGTTACCGCGATCCGGGACGGTGATCCCGGCCAGGTTCTATACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGt                                    <  2:2064525/289‑1 (MQ=255)
                                                                                                                                                                                                                                              gaagaaCACGGGAGGCATTGCGCCGACTGCCTGAATACAGATGG‑AGATATACGGAAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAGCGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAAAGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGAc                                <  2:2607406/288‑1 (MQ=255)
                                                                                                                                                                                                                                               aagaaCACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTc                                                                                                                          >  2:1278739/1‑197 (MQ=255)
                                                                                                                                                                                                                                               aagaaCACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTc                                                                                                                          <  1:1278739/197‑1 (MQ=255)
                                                                                                                                                                                                                                               aagaaCACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         >  1:156357/1‑214 (MQ=255)
                                                                                                                                                                                                                                               aagaaCACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTTGTGGTCACCGATGTCTGGTACGGAGTCGACaa                              >  2:1426837/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  aaCACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGcacca                                                                   <  1:2599598/249‑1 (MQ=255)
                                                                                                                                                                                                                                                     acTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGc                                                                                                         >  2:2165764/1‑208 (MQ=255)
                                                                                                                                                                                                                                                      cTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCGACCGCCAGCACGTAAGGCATTTCGTTAACGGGGCCGACGAGTCAGTCGATACGGTCAGTATACGGAATGTAGCTGTGACATGTCTTGTGTTCCCCCACTTTCTCCTCTCCCCGGTTGTGGTCACAGGTGCCTGGTCCGCGGTCGACAATCTCtt                        >  2:169034/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               ttGCGCCGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTaa                                                       <  1:302199/248‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCaa        <  1:252325/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cGACGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCaa        >  1:706965/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       aCGTCCTGAATAAAGGTCG‑AGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCaaac      >  1:2314177/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        ||||                                                                                                                                                                                                                                                                                 
CTTTCGCGCCATAGGCGGCAACGCCCTGGGAACGACCTTTCAGAATGGTGTTTTGCAGCGCCGCTTTCTCGTAAGACGCCAGACGTTTCGGCATCCAGTCGAGGAACTCACGCAGCAGGCGATCCCAGCCGCGCGGCAGGTCGTGCGCTACGCCGCCAATACGGAACCACGCCGGGTGCATACGGAAACCAGTGATTGCTTCCACCAGATCGTAAATTTTCTGACGATCGGTAAAGGCGAAGAACACTGGCGTCATTGCGCCGACGTCCTGAATAAAGGTGC‑TGATATACAGCAGGTGACTGTTGATGCGGAACAGTTCGGAGAGCATAACGCGAATGACGTTAACGCGATCCGGCACGGTGATCCCGGCCAGTTTCTCTACCGCCAGCACGTAAGGCATTTCGTTAACGCAGCCGCCGAGGTATTCGATACGGTCAGTATACGGAATGTAGCTGTGCCAGGACTGGCGTTCGCCCATTTTCTCCGCACCACGGTGGTGGTAACCGATGTCTGGTACGCAGTCGACAATCTCTTCGCCATCGAGTTGCAAAACGAT  >  CP042583/1973894‑1974449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A