Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A24 F31 I3 R1
|
19 |
130.1 |
4745868 |
94.1% |
4465861 |
139.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913_3_pae_tpiA |
4,227,550 |
G→C |
intergenic (+123/‑97) |
metH → / → yjbB |
homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913_3_pae_tpiA | 4,227,550 | 0 | G | C | 89.0%
| 454.6
/ 41.5
| 146 | intergenic (+123/‑97) | metH/yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter |
| Reads supporting (aligned to +/- strand): ref base G (10/6); new base C (70/59); total (80/66) |
| Fisher's exact test for biased strand distribution p-value = 6.02e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 |
Only 100 of 146 total aligned reads displayed.
TCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTGGG > NC_000913_3_pae_tpiA/4227406‑4227695
|
tCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCaaa > 4:561356/1‑150 (MQ=255)
tATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGcaca > 3:257070/1‑150 (MQ=255)
aCGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTaa < 1:911105/150‑1 (MQ=255)
gcgGACTGATTCACAAATCCGTCACGATTCCTTACAACAAACAGGGCGCTCAATGTGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAAACTTAGCCGGAAAAACGCATCTCAAAAGGCACAGTAAAg > 2:1164003/1‑150 (MQ=255)
aCTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGc < 3:433043/150‑1 (MQ=255)
tCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAAAAATCTTACCCGGAAAAACGAACCTCAAAAGGCACAGTAAAGATGCCAGTCa > 1:1158282/1‑150 (MQ=255)
acaAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGc > 4:408526/1‑150 (MQ=255)
acaAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGc > 3:674284/1‑150 (MQ=255)
aaaTCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCgt < 1:1266076/150‑1 (MQ=255)
aaaTCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCgt > 1:1163905/1‑150 (MQ=255)
cTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAATGAATGTCAAAAGGAACAGTAAAGATGCCAGTCAGCGTGttt > 1:64507/1‑150 (MQ=255)
cTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGttt > 1:1016267/1‑150 (MQ=255)
aCTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGt > 1:569920/1‑150 (MQ=255)
ttccttccAACAAACAGGGGGCTAAATGAGTGTCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGATAGAAAAATATTAGAAAGAACAACGCATCCCAACTGGCTCAGCATAGATTTCAGTCAGCGTGTTTCCGGCCCtt < 2:1230803/150‑1 (MQ=255)
tccattACAACAAAAAGAGAGAACAATGAGTGACCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATCATATTAGCCGGAAAATCGAATCTCAACAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCtt < 2:1230750/146‑1 (MQ=255)
tCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCttt < 2:1016267/150‑1 (MQ=255)
ccTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTg > 4:796680/1‑150 (MQ=255)
acaacaAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCa > 2:765400/1‑150 (MQ=255)
acaacaAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTCGGTCa < 4:746162/150‑1 (MQ=255)
aacaaacaGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTGGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCAtt > 1:1429636/1‑150 (MQ=255)
aacaaacaGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCAtt < 1:1285312/150‑1 (MQ=255)
acaaacaGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTc > 2:112551/1‑150 (MQ=255)
caaacaGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCgt < 1:755443/127‑1 (MQ=255)
gacaGGGCACTCATTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAAt > 3:195504/2‑150 (MQ=255)
acaGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAAtt > 1:1209631/1‑150 (MQ=255)
acaGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAAt < 1:1277723/149‑1 (MQ=255)
aGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGTAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGc > 1:349870/1‑150 (MQ=255)
ggCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCtt > 1:942787/1‑150 (MQ=255)
ggCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCtt > 2:513681/1‑150 (MQ=255)
gcggggaaTGAGTGGCTGTTCTCTTTATTAGTATGAAACACTGATTTTGGAGACAGGCTGGAATAATCTTGGCCGGAAAAACGAGTCTCAAAGTGCACTGTTAGGAGGCCAGTCAGGGTTTTTCCGGTCCTTTTGTCATTCAATTGCTTc < 2:1450185/144‑1 (MQ=255)
gcgcTCAATGAGTGTCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTc < 1:161793/150‑1 (MQ=255)
cgcTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCa < 2:211243/150‑1 (MQ=255)
gcTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGAt < 1:594756/105‑1 (MQ=255)
cAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGaa < 2:1433870/150‑1 (MQ=255)
aaTGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAAc < 1:1310123/150‑1 (MQ=255)
tGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACat < 1:10359/150‑1 (MQ=255)
gcgTGCCATGTCTCTTTCTTAATATGAAACCATTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTAAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACcta < 2:721800/148‑1 (MQ=255)
gAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAATGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACata < 3:754916/150‑1 (MQ=255)
gtgtCCTGTCTCTTGATCAATATGAACCACTTCTCATGGACCTAGGCTGGAATCATCTTAGACGGAAAAAAGAATACCACCAAGCACAGTAAAAATGCCAGTCAGCGTGTTTTCGGTCCTGTGGTCATTCAATTGCTTCAGGAACAtata < 3:86599/150‑1 (MQ=255)
tGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATaa < 1:173316/150‑1 (MQ=255)
cccTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTaa < 2:1311609/89‑1 (MQ=255)
cccTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTaa > 1:1311609/1‑89 (MQ=255)
cccTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACg > 2:1172137/1‑150 (MQ=255)
ccTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGa < 2:151530/150‑1 (MQ=255)
ccTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGa > 4:153504/1‑150 (MQ=255)
tGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATa > 1:432298/1‑150 (MQ=255)
gTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATaa < 3:865794/150‑1 (MQ=255)
tctcTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAg > 1:422997/1‑150 (MQ=255)
ctctTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAgg < 3:153504/150‑1 (MQ=255)
tattaATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAAc < 4:674284/150‑1 (MQ=255)
tattaATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAAc > 1:1082978/1‑150 (MQ=255)
attaATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGc > 3:371149/1‑91 (MQ=255)
attaATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAAcc > 1:732971/1‑150 (MQ=255)
attaATATGAAACACTTATACTGGAAACAGGCTGGAATAAACTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAAcc > 2:725617/1‑150 (MQ=255)
attaAAATGAAACACTCATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGAGTTTCCGGTCCTTTGGTCATCCAATTGCTTCAGGAACATATAACGATAAGGAGAAcc > 2:1205962/1‑150 (MQ=255)
ttaATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACAtata > 1:1226761/1‑134 (MQ=255)
taATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTg < 3:509951/150‑1 (MQ=255)
atatGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGaa < 2:49355/150‑1 (MQ=255)
atatGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGaa < 2:182660/150‑1 (MQ=255)
tGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAg > 1:1431768/1‑119 (MQ=255)
tGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAg < 2:1431768/119‑1 (MQ=255)
tGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTc > 2:433005/1‑150 (MQ=255)
gAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCg > 4:414705/1‑150 (MQ=255)
aaaCACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCgt < 3:796680/150‑1 (MQ=255)
cTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTaa < 2:381948/150‑1 (MQ=255)
ttATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAGCATATAACGATAAGGAGAACCTGAACTCGTGTTAAc < 4:722361/150‑1 (MQ=255)
ttATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAAc < 2:1213397/150‑1 (MQ=255)
tataCTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACg < 1:112551/150‑1 (MQ=255)
ataCTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgc > 1:453963/1‑150 (MQ=255)
ataCTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgc < 2:872101/150‑1 (MQ=255)
taCTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgct > 1:903793/1‑150 (MQ=255)
aCTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgctg > 2:1329854/1‑150 (MQ=255)
cTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgctgc < 1:1025396/150‑1 (MQ=255)
tGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAg < 4:634946/105‑1 (MQ=255)
tGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgctgct > 4:871682/1‑150 (MQ=255)
tGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgctgct > 2:554538/1‑150 (MQ=255)
tGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgctgct > 2:248620/1‑150 (MQ=255)
gAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAAcc > 2:682350/1‑127 (MQ=255)
gAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAAcc < 1:682350/127‑1 (MQ=255)
aaCAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCAc < 4:584005/150‑1 (MQ=255)
aCAGGCTGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCAcc < 4:297292/150‑1 (MQ=255)
tGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCttt > 1:378488/1‑150 (MQ=255)
tGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCttt > 1:378548/1‑150 (MQ=255)
tGGAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCttt > 2:189128/1‑150 (MQ=255)
gAATAATCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCt > 3:614095/1‑150 (MQ=255)
aatCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgctgc > 2:713903/1‑132 (MQ=255)
aatCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACgctgc < 1:713903/132‑1 (MQ=255)
atCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGt > 2:168079/1‑150 (MQ=255)
atCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGt > 1:522471/1‑150 (MQ=255)
tCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCgt > 1:497163/1‑119 (MQ=255)
tCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCgt < 2:497534/119‑1 (MQ=255)
tCTTAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGTc > 3:68988/1‑150 (MQ=255)
ttAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCttt < 2:481641/65‑1 (MQ=255)
ttAGCCGGAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCttt > 1:481641/1‑65 (MQ=255)
gAAAAACGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGACCATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCctgctg > 1:35703/1‑150 (MQ=255)
aaaCGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTc > 4:244098/1‑105 (MQ=255)
aaaCGAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTc < 3:244098/105‑1 (MQ=255)
gAATGTCAAAAGGCGCAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAGGGAGATCGTGAACGCGTGTTAACGGTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTggg < 2:64507/150‑1 (MQ=255)
gAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGGACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTggg < 2:64564/150‑1 (MQ=255)
gAATCTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTggg < 3:620175/150‑1 (MQ=255)
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TCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGATGCCAGTCAGCGTGTTTCCGGTCCTTTGGTCATTCAATTGCTTCAGGAACATATAACGATAAGGAGAACCTGAACTCGTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTGGG > NC_000913_3_pae_tpiA/4227406‑4227695
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
