Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,406,831 |
A→G |
intergenic (+33/‑51) |
b2290 → / → b2291 |
putative aminotransferase/putative alpha helix protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,406,831 | 0 | A | G | 95.6%
| 331.5
/ 3.9
| 114 | intergenic (+33/‑51) | b2290/b2291 | putative aminotransferase/putative alpha helix protein |
| Reads supporting (aligned to +/- strand): ref base A (5/0); new base G (63/46); total (68/46) |
| Fisher's exact test for biased strand distribution p-value = 8.03e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.26e-01 |
Only 100 of 155 total aligned reads displayed.
TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTG > NC_000913/2406741‑2406920
|
tatCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCggcggc < 1:4083300/93‑1 (MQ=255)
tatCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCggcggc > 1:1037811/1‑93 (MQ=255)
tatCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCggcggc > 1:1578368/1‑93 (MQ=255)
tatCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCggcggc > 2:4190456/1‑93 (MQ=255)
tatCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCggcggc > 2:2508170/1‑93 (MQ=255)
atCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGgcggcg < 2:4631929/93‑1 (MQ=255)
tCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGt > 2:179863/1‑93 (MQ=255)
cGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGtt < 2:2277351/93‑1 (MQ=255)
gCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGTTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATc < 2:1429751/93‑1 (MQ=255)
gCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATc > 1:796652/1‑93 (MQ=255)
gCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATc > 1:796653/1‑93 (MQ=255)
cTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATcc > 1:1878482/1‑93 (MQ=255)
tGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATccc < 2:946323/93‑1 (MQ=255)
tGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATccc < 1:70353/93‑1 (MQ=255)
tGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATccc < 2:69329/93‑1 (MQ=255)
gTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGGAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATcccc > 2:3861847/1‑92 (MQ=255)
tCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGc > 1:283467/1‑93 (MQ=255)
tttGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCca > 1:2446303/1‑93 (MQ=255)
tttGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCca > 2:4681200/1‑93 (MQ=255)
gCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCCCTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATg < 2:3219172/93‑1 (MQ=255)
gCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATg > 1:4745560/1‑93 (MQ=255)
gCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATg > 1:3522765/1‑93 (MQ=255)
gCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATg < 1:1653731/93‑1 (MQ=255)
gCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATg > 1:4301958/1‑93 (MQ=255)
aaGTGCGCCCGTTTCCTCTCTGGTTATCATCAGCTGTAATCTTAATTCCACTGCCGGAGATTGCATCCGGGGGCGTTATCCCGCCACAATGAc < 2:1143917/93‑1 (MQ=255)
aGTTCGCGCTTTTCCTTTTTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAcc < 1:3932243/93‑1 (MQ=255)
aGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAcc < 1:293231/93‑1 (MQ=255)
gTTCGCGCGTTTCCTTTCTGGTTATCATCAGGTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCt < 1:1194306/93‑1 (MQ=255)
gTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCt < 1:2018777/93‑1 (MQ=255)
gTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCt > 2:481766/1‑93 (MQ=255)
tCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCtga < 1:2364025/93‑1 (MQ=255)
cgcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCtgatga > 2:156435/1‑93 (MQ=255)
gcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTgatgat > 1:3859803/1‑93 (MQ=255)
gcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTgatgat > 2:1020906/1‑93 (MQ=255)
gcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTgatgat > 2:2375518/1‑93 (MQ=255)
gcgTTTCCTTTCTGGTTATCATCAGCTGAAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTgatgat < 1:4543851/93‑1 (MQ=255)
cgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGatgatg < 2:625274/93‑1 (MQ=255)
cgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCACGCCACAATGACCTGatgatg < 2:158020/93‑1 (MQ=255)
gTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGt > 1:903732/1‑93 (MQ=255)
ccTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtcatc < 2:1087220/93‑1 (MQ=255)
ccTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtcatc < 1:1747664/93‑1 (MQ=255)
cTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtcatca < 1:4364577/93‑1 (MQ=255)
tttCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTcatcat > 2:1454947/1‑93 (MQ=255)
tttCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTcatcat > 1:1585408/1‑93 (MQ=255)
tttCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTcatcat > 1:1067047/1‑93 (MQ=255)
ttCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATa > 2:3877421/1‑93 (MQ=255)
ttGGTTATCATCAGCTGTATTCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACg < 2:3328024/92‑1 (MQ=255)
tgtttATAATCAGCTGTAATCTTAATTTCACTGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGt < 1:2712597/90‑1 (MQ=255)
tgTTATCATCAGCTTTAATCTCAATTTCACTGCCGGAGATTGCACCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTa < 1:3389675/92‑1 (MQ=255)
ggTTATCATCAGCTGTAATCTTAATTTCTCTGCGGGAGATTGCATCCGGCGCCGTTCTCCCGCCACAATGACCTGATGATGTCATCATACGTa < 1:3389676/93‑1 (MQ=255)
gTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTaa < 1:224191/93‑1 (MQ=255)
ttATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAg > 2:1814124/1‑93 (MQ=255)
ttATCATCAGCTGTAACCTTAATTACCCTGCCGGAGATTGCACCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAg < 1:1167922/93‑1 (MQ=255)
tcataaGCTGTACTCTTAATTTCACTGCCGGAAATTGCATCCGGCGCCCTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTc < 1:2467298/93‑1 (MQ=255)
atcaGCTGTAATCTTAATTTCACGGCCGGAGATTGCATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCAc < 2:110079/93‑1 (MQ=255)
tcaGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACt > 2:3577646/1‑93 (MQ=255)
caGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTa < 1:3554124/93‑1 (MQ=255)
cTGTAATTTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGa < 1:4457298/93‑1 (MQ=255)
tGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa > 2:4466419/1‑93 (MQ=255)
tGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa > 1:3819495/1‑93 (MQ=255)
gTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaaa > 2:1386606/1‑93 (MQ=255)
gTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaaa > 2:329426/1‑93 (MQ=255)
gTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaaa > 1:2431035/1‑93 (MQ=255)
aaTCTTAATTTCACTGCGGGAGATTGCATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACa < 2:2119459/93‑1 (MQ=255)
aaTCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACa < 2:3311885/93‑1 (MQ=255)
aaTCTTAATTTACAGGCGGGAGTGTGCAGCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAGCa < 1:2800395/93‑1 (MQ=255)
tCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACaga > 2:3586235/1‑93 (MQ=255)
tCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACaga > 1:4030726/1‑93 (MQ=255)
tCTTAATTTCACTGCCGAAGATTGCACCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACaga < 2:2776898/93‑1 (MQ=255)
cTTAATTTCACTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACagag < 2:2843189/93‑1 (MQ=255)
aTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAt > 1:4197843/1‑93 (MQ=255)
tttCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtt > 2:2368377/1‑93 (MQ=255)
ttCCCTGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttt < 1:4490325/93‑1 (MQ=255)
ttCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttt > 2:4134865/1‑93 (MQ=255)
tcccTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttt < 2:4301115/90‑1 (MQ=255)
ccggCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt < 2:3705057/90‑1 (MQ=255)
aCTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt > 1:2201295/1‑93 (MQ=255)
aCTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt > 2:1186619/1‑93 (MQ=255)
aCTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt > 1:3212841/1‑93 (MQ=255)
cTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttttttt > 1:4213374/1‑93 (MQ=255)
cTGCCGGAGATTGCAGCGGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttttttt < 1:4650798/93‑1 (MQ=255)
tGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTg > 1:526559/1‑93 (MQ=255)
tGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTg > 1:3182928/1‑93 (MQ=255)
gCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGc > 2:3656228/1‑93 (MQ=255)
cGGAGATTGCACCCGGCGGCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGccc < 1:4339423/93‑1 (MQ=255)
cGGAGATTGCACCCGGCGGCGTTGCCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGccc < 1:1184242/93‑1 (MQ=255)
gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCac > 1:1263970/1‑92 (MQ=255)
gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAt > 1:2102551/1‑93 (MQ=255)
ggaTTGCATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtc < 1:95108/92‑1 (MQ=255)
agaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtc < 2:1327208/93‑1 (MQ=255)
gaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtct < 2:1256801/93‑1 (MQ=255)
aTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctc > 2:2055064/1‑93 (MQ=255)
aTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctc > 2:2726086/1‑93 (MQ=255)
aTTGCACCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctc < 2:2431837/93‑1 (MQ=255)
ttGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATTTCATCATACGTAATGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctct > 1:914148/1‑93 (MQ=255)
cctCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTccc < 1:679503/91‑1 (MQ=255)
cATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTccc > 2:4748363/1‑93 (MQ=255)
ccGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGcc < 1:2885494/93‑1 (MQ=255)
cggcggCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCt > 2:1398370/1‑93 (MQ=255)
ggcggcGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTg < 2:4127638/93‑1 (MQ=255)
|
TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTG > NC_000913/2406741‑2406920
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAAC > NC_000913/2406738‑2406924
|
TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCG < SRR4302544.1286132/94‑1 (MQ=60)
ATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGC > SRR4302544.1048125/1‑94 (MQ=60)
ATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGC > SRR4302544.1593969/1‑94 (MQ=60)
TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCG < SRR4302544.4123917/94‑1 (MQ=60)
ATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGT > SRR4302544.215698/1‑94 (MQ=60)
AGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATC > SRR4302544.2885292/1‑94 (MQ=60)
AGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATC > SRR4302544.804380/1‑94 (MQ=60)
AGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATC > SRR4302544.804379/1‑94 (MQ=60)
GCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCC > SRR4302544.1896644/1‑94 (MQ=60)
TGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCG < SRR4302544.71039/94‑1 (MQ=60)
TGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCG > SRR4302544.1942698/1‑94 (MQ=60)
GTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGC > SRR4302544.286424/1‑94 (MQ=60)
CTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCA > SRR4302544.2469627/1‑94 (MQ=60)
AGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATG > SRR4302544.4792319/1‑94 (MQ=60)
AGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATG > SRR4302544.3556418/1‑94 (MQ=60)
AGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATG > SRR4302544.4345844/1‑94 (MQ=60)
GCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGA < SRR4302544.1670041/94‑1 (MQ=60)
CAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAC > SRR4302544.3700376/1‑94 (MQ=60)
AGTTCGCGCTTTTCCTTTTTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCT < SRR4302544.3971298/94‑1 (MQ=60)
AGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCT > SRR4302544.1173764/1‑94 (MQ=60)
AGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCT < SRR4302544.296267/94‑1 (MQ=60)
GTTCGCGCGTTTCCTTTCTGGTTATCATCAGGTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTG < SRR4302544.1206153/94‑1 (MQ=60)
GTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTG < SRR4302544.994417/94‑1 (MQ=60)
GTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTG < SRR4302544.2038376/94‑1 (MQ=60)
TCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGAT < SRR4302544.2386405/94‑1 (MQ=60)
CGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGAT > SRR4302544.3898122/1‑94 (MQ=60)
CGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGAT < SRR4302544.4451028/94‑1 (MQ=60)
GCGTTTCCTTTCTGGTTATCATCAGCTGAAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATG < SRR4302544.4589248/94‑1 (MQ=60)
CGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGT > SRR4302544.912678/1‑94 (MQ=60)
TTTCCTTTCTTGTTTTCATCGGCTGTAATCTTAATTTCCTGGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCA < SRR4302544.592356/94‑1 (MQ=60)
CCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCA < SRR4302544.1764771/94‑1 (MQ=60)
CTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCAT < SRR4302544.4408853/94‑1 (MQ=60)
CTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCAT > SRR4302544.1077658/1‑94 (MQ=60)
CTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCAT > SRR4302544.1601061/1‑94 (MQ=60)
CTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGT > SRR4302544.1444366/1‑94 (MQ=60)
TGTTTATAATCAGCTGTAATCTTAATTTCACTGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTA < SRR4302544.2738692/94‑1 (MQ=60)
TGGTTATCATCAGCTGTACTCTTAATTCCACGCCCGGAGATGCCATCCGGCGGCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTA < SRR4302544.2738691/94‑1 (MQ=53)
TGTTATCATCAGCTTTAATCTCAATTTCACTGCCGGAGATTGCACCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAA < SRR4302544.3422069/94‑1 (MQ=60)
GGTTATCATCAGCTGTAATCTTAATTTCTCTGCGGGAGATTGCATCCGGCGCCGTTCTCCCGCCACAATGACCTGATGATGTCATCATACGTAA < SRR4302544.3422070/94‑1 (MQ=60)
GTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAG < SRR4302544.226513/94‑1 (MQ=60)
TTATCATCAGCTGTAACCTTAATTACCCTGCCGGAGATTGCACCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGG < SRR4302544.1179568/94‑1 (MQ=60)
TCATAAGCTGTACTCTTAATTTCACTGCCGGAAATTGCATCCGGCGCCCTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCA < SRR4302544.2490867/94‑1 (MQ=60)
ATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACT < SRR4302544.782524/94‑1 (MQ=60)
ATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACT < SRR4302544.4336630/94‑1 (MQ=60)
CAGCTGTAATCTTATTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT < SRR4302544.2297684/94‑1 (MQ=60)
CAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT < SRR4302544.3588174/94‑1 (MQ=60)
AGCTGTAATCTTAATTTCACTGCCGGCGATTACATCCGGCGGCGTTATCCCGCCAAAATGACCTGATGATGTCATCATACGTAAGGTCACTATG > SRR4302544.2512153/1‑94 (MQ=60)
CTGTAATTTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAA < SRR4302544.4502178/94‑1 (MQ=60)
CTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAA > SRR4302544.3857355/1‑94 (MQ=60)
TGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAA > SRR4302544.2454193/1‑94 (MQ=60)
aatcttaatttacaggcgggagtgtgcagCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAGCAG < SRR4302544.2827378/65‑1 (MQ=60)
AATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAG < SRR4302544.2827377/94‑1 (MQ=60)
ATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGA > SRR4302544.4070876/1‑94 (MQ=60)
TCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCAGACGTCAGGTCACTATGAAACAGAC > SRR4302544.4573562/1‑94 (MQ=60)
CTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGC > SRR4302544.406333/1‑94 (MQ=60)
TTAATTTCCCTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCC < SRR4302544.2455655/94‑1 (MQ=60)
TTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCTCAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCC < SRR4302544.4753051/94‑1 (MQ=60)
AATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAT > SRR4302544.4239632/1‑94 (MQ=60)
TTCCCTGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTT < SRR4302544.4535407/94‑1 (MQ=60)
CACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTT > SRR4302544.2222039/1‑94 (MQ=60)
CACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTT > SRR4302544.3243483/1‑94 (MQ=60)
ACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTT > SRR4302544.4255845/1‑94 (MQ=60)
CTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTG > SRR4302544.531771/1‑94 (MQ=60)
CTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTG > SRR4302544.3213219/1‑94 (MQ=60)
CTGCCGGAGATTGCAGCGGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTG < SRR4302544.4696831/94‑1 (MQ=60)
GCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCC > SRR4302544.3452397/1‑94 (MQ=60)
CGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCA < SRR4302544.1618502/94‑1 (MQ=60)
CGGAGATTGCATCCGGCGGCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCA < SRR4302544.1198999/94‑1 (MQ=60)
CGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGGCCA > SRR4302544.2696284/1‑94 (MQ=60)
CGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCA > SRR4302544.439669/1‑94 (MQ=60)
CGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCA > SRR4302544.3401234/1‑94 (MQ=60)
CGGAGATTGCACCCGGCGGCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCA < SRR4302544.4383578/94‑1 (MQ=60)
CGGAGATTGCACCCGGCGGCGTTGCCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCA < SRR4302544.1196019/94‑1 (MQ=60)
GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAT > SRR4302544.2122784/1‑94 (MQ=60)
GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAC > SRR4302544.1276405/1‑94 (MQ=60)
GGATTGCATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCT < SRR4302544.95983/94‑1 (MQ=60)
GATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTC > SRR4302544.3000521/1‑94 (MQ=60)
atgccagCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCT < SRR4302544.324626/87‑1 (MQ=60)
ATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATTTCATCATACGTAATGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCT > SRR4302544.923183/1‑94 (MQ=60)
ATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCT > SRR4302544.923182/1‑94 (MQ=60)
CCTCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCG < SRR4302544.686243/94‑1 (MQ=60)
CACCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCG < SRR4302544.906267/94‑1 (MQ=60)
ATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGC > SRR4302544.1783997/1‑94 (MQ=60)
CCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCT < SRR4302544.2913322/94‑1 (MQ=60)
CGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTG < SRR4302544.3858765/94‑1 (MQ=60)
CGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTG > SRR4302544.4209158/1‑94 (MQ=60)
GGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGA > SRR4302544.3493855/1‑94 (MQ=60)
GGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGA > SRR4302544.2253590/1‑94 (MQ=60)
CGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAA > SRR4302544.2882014/1‑94 (MQ=60)
GGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAAC > SRR4302544.1976249/1‑94 (MQ=60)
GGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAAC > SRR4302544.3510239/1‑94 (MQ=60)
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TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAAC > NC_000913/2406738‑2406924
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
