Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,391,348 |
A→G |
A573A (GCT→GCC) |
nuoL ← |
NADH dehydrogenase I chain L |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,391,348 | 0 | A | G | 99.5%
| 698.1
/ ‑4.9
| 218 | A573A (GCT→GCC) | nuoL | NADH dehydrogenase I chain L |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (107/109); total (108/110) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.41e-01 |
Only 100 of 229 total aligned reads displayed.
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > NC_000913/2391258‑2391437
|
gACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGc < 1:4573694/93‑1 (MQ=255)
cGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCgg > 2:6132141/1‑93 (MQ=255)
cGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCgg < 1:1439947/93‑1 (MQ=255)
gCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCggg < 1:2373481/93‑1 (MQ=255)
cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa < 1:6078243/93‑1 (MQ=255)
cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa > 1:3636440/1‑93 (MQ=255)
cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa < 1:5480263/93‑1 (MQ=255)
cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa < 1:491447/93‑1 (MQ=255)
ccGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATg > 2:3036951/1‑93 (MQ=255)
cGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGt < 2:1587975/93‑1 (MQ=255)
aTGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtc < 2:6665219/93‑1 (MQ=255)
gCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcat > 2:2739948/1‑93 (MQ=255)
gCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcat > 1:743213/1‑93 (MQ=255)
tCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcatca > 1:5014699/1‑93 (MQ=255)
tCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcatca < 2:5905396/93‑1 (MQ=255)
cATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTcatcat > 2:5952796/1‑93 (MQ=255)
aTGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGAGATGTTCATCAtt < 1:6729707/93‑1 (MQ=255)
tGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGCCGGCCGAGATGTTCATCATTg > 1:1814309/1‑93 (MQ=255)
tGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTg < 1:6342006/93‑1 (MQ=255)
ggATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGa > 2:416168/1‑93 (MQ=255)
tGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGtt < 2:1027692/93‑1 (MQ=255)
ccACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa < 1:5331225/93‑1 (MQ=255)
acaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGc < 2:4439633/93‑1 (MQ=255)
aCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt < 2:5038613/93‑1 (MQ=255)
aCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt > 1:17017/1‑93 (MQ=255)
aGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcgc < 2:3603783/93‑1 (MQ=255)
gcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGtt < 1:2783757/93‑1 (MQ=255)
gcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGtt > 2:6365448/1‑93 (MQ=255)
gcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGtt > 2:1738523/1‑93 (MQ=255)
cAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGttt > 2:5508842/1‑93 (MQ=255)
aGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGATCATCATTGAGTTCAGCGGATCGCGTTTc > 1:5839963/1‑93 (MQ=255)
gATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCa > 1:4662917/1‑93 (MQ=255)
aTAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAg > 2:632642/1‑93 (MQ=255)
tAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGc > 2:6705725/1‑93 (MQ=255)
aGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCa > 1:3757229/1‑93 (MQ=255)
aGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCa < 1:3485693/93‑1 (MQ=255)
gCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCaa > 1:2290626/1‑93 (MQ=255)
ccGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAc < 1:551631/93‑1 (MQ=255)
cGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAcc > 1:2240305/1‑93 (MQ=255)
ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg > 1:4328234/1‑93 (MQ=255)
tctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAACAgg > 2:4940011/1‑93 (MQ=255)
ctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGc < 1:5154582/93‑1 (MQ=255)
tcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCa > 2:5414338/1‑93 (MQ=255)
tcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCa > 2:4806287/1‑93 (MQ=255)
cACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCaa > 2:4053860/1‑93 (MQ=255)
cACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCaa > 2:1182126/1‑93 (MQ=255)
cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa > 2:2358848/1‑93 (MQ=255)
cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa < 1:3005443/93‑1 (MQ=255)
cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa > 1:4404189/1‑93 (MQ=255)
ttAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAc > 2:519897/1‑93 (MQ=255)
ttAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAc < 2:4290314/93‑1 (MQ=255)
tAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAcc > 2:3892548/1‑93 (MQ=255)
aaCAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAccc < 2:4222047/93‑1 (MQ=255)
aCAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCa < 1:2918321/93‑1 (MQ=255)
agcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAgg > 2:2887407/1‑93 (MQ=255)
gcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGa > 1:1093206/1‑93 (MQ=255)
gcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGa > 1:1923549/1‑93 (MQ=255)
cagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGaa < 2:1309513/93‑1 (MQ=255)
agACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAc < 2:294155/93‑1 (MQ=255)
agACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAc < 2:4095319/93‑1 (MQ=255)
gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg > 2:5773864/1‑93 (MQ=255)
gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg > 1:3228968/1‑93 (MQ=255)
ccTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGc < 1:2065852/93‑1 (MQ=255)
ccTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGc < 1:4446269/93‑1 (MQ=255)
ccTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGc < 1:4155855/93‑1 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt < 1:5688628/93‑1 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt > 1:6420254/1‑93 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt < 1:3548314/93‑1 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt < 1:4120423/93‑1 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt > 1:482348/1‑93 (MQ=255)
aCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGAc < 1:4896185/93‑1 (MQ=255)
ccTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACg > 1:2668885/1‑93 (MQ=255)
cTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGa < 1:2107479/93‑1 (MQ=255)
tGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGaa < 2:787202/93‑1 (MQ=255)
tGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGaa > 1:1371635/1‑93 (MQ=255)
aaaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGCACGGCTTGACGacaca > 1:416124/1‑89 (MQ=255)
aaaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAacac > 1:3597446/1‑93 (MQ=255)
aaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACt < 1:5971905/93‑1 (MQ=255)
aGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGACCACtt > 2:2806861/1‑93 (MQ=255)
gCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACttt < 1:1015796/93‑1 (MQ=255)
cGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTg < 2:2135935/93‑1 (MQ=255)
gggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGt < 2:4553580/93‑1 (MQ=255)
gggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGt > 2:2465688/1‑93 (MQ=255)
ggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTc < 2:64922/93‑1 (MQ=255)
gAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCa > 1:692957/1‑93 (MQ=255)
gAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCa > 1:5939505/1‑93 (MQ=255)
aaaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCAt < 1:2156172/93‑1 (MQ=255)
aaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATa > 2:4524909/1‑93 (MQ=255)
aaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATa > 1:5379854/1‑93 (MQ=255)
aGGACGGCTGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc > 1:5073781/1‑93 (MQ=255)
aGGACGGCCGGTATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc < 2:3443988/93‑1 (MQ=255)
aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTTAAGAACACTTTGTCATaa > 2:1442477/1‑92 (MQ=255)
aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc < 1:4688431/93‑1 (MQ=255)
aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc > 2:5317795/1‑93 (MQ=255)
aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc > 1:6245680/1‑93 (MQ=255)
aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc > 2:1908422/1‑93 (MQ=255)
gACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACaa > 1:2823690/1‑92 (MQ=255)
gACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAg < 1:4378385/93‑1 (MQ=255)
gACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAg < 2:3741033/93‑1 (MQ=255)
gACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGAAACGGCTTGACCGACACTTTGTCATACAg > 1:3582462/1‑93 (MQ=255)
|
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > NC_000913/2391258‑2391437
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATACAGC > NC_000913/2391255‑2391438
|
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACG > SRR4302536.944132/1‑94 (MQ=60)
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACG > SRR4302536.4879292/1‑94 (MQ=60)
ACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGGGGGAAAGGACGG < SRR4302536.1801811/94‑1 (MQ=60)
CGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGC < SRR4302536.4879610/94‑1 (MQ=60)
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCC < SRR4302536.4710965/94‑1 (MQ=60)
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCC > SRR4302536.5315842/1‑94 (MQ=60)
ACGGCACCGATGCTCACGGATGCCACATACCAGCGCATATAGCCGTTCTCACTGACCAGCAGACCTTTTCCTGCAAAGCGGGAAAGGGCGGCCG < SRR4302536.6623905/94‑1 (MQ=60)
CGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGG < SRR4302536.4760211/94‑1 (MQ=60)
CGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGG < SRR4302536.1482651/94‑1 (MQ=60)
GCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGA < SRR4302536.2445385/94‑1 (MQ=60)
GCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGA > SRR4302536.3745188/1‑94 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302536.5643908/94‑1 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302536.6259549/94‑1 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302536.504170/94‑1 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302536.1848273/94‑1 (MQ=60)
CCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGT < SRR4302536.3468451/94‑1 (MQ=60)
TGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCAT > SRR4302536.765028/1‑94 (MQ=60)
GCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATC < SRR4302536.6569321/94‑1 (MQ=60)
GCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATC > SRR4302536.2580752/1‑94 (MQ=60)
CTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCA > SRR4302536.5165080/1‑94 (MQ=60)
TCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAT < SRR4302536.5546839/94‑1 (MQ=60)
ATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGCCGGCCGAGATGTTCATCATTG > SRR4302536.1869045/1‑94 (MQ=60)
ATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGAGATGTTCATCATTG < SRR4302536.6929723/94‑1 (MQ=60)
TGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGA < SRR4302536.6530944/94‑1 (MQ=60)
TGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGA < SRR4302536.2335480/94‑1 (MQ=60)
TGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGA > SRR4302536.6452184/1‑94 (MQ=60)
GATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGAAAGGCCGGGATGTTCATCATTGAGT > SRR4302536.5492813/1‑94 (MQ=60)
ATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTT < SRR4302536.1905519/94‑1 (MQ=60)
GCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCA < SRR4302536.3117036/94‑1 (MQ=60)
CCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAG < SRR4302536.5490501/94‑1 (MQ=60)
CACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGC > SRR4302536.4807980/1‑94 (MQ=60)
ATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGA < SRR4302536.727849/94‑1 (MQ=60)
ATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGA < SRR4302536.3738234/94‑1 (MQ=60)
ATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGA > SRR4302536.5291840/1‑94 (MQ=60)
TACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAT > SRR4302536.17488/1‑94 (MQ=60)
TCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAATTACGGCCGGGATGTTCATCATTGAGTGCAGCGGATC < SRR4302536.5075375/94‑1 (MQ=60)
ACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGGAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATC > SRR4302536.5052084/1‑94 (MQ=60)
CCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGATGGCCGGGATGTTCATCATTGAGTTCAGCGGATCG < SRR4302536.1118144/94‑1 (MQ=60)
GCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGT < SRR4302536.3672600/94‑1 (MQ=60)
GCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTT < SRR4302536.2866439/94‑1 (MQ=60)
CAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTC > SRR4302536.4036149/1‑94 (MQ=60)
CAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGATCATCATTGAGTTCAGCGGATCGCGTTTC > SRR4302536.6013958/1‑94 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA < SRR4302536.5717696/94‑1 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA > SRR4302536.4803120/1‑94 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA > SRR4302536.6141092/1‑94 (MQ=60)
GATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAG < SRR4302536.2054253/94‑1 (MQ=60)
GATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAG < SRR4302536.2370598/94‑1 (MQ=60)
GATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAG < SRR4302536.3684899/94‑1 (MQ=60)
ATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGC < SRR4302536.4292849/94‑1 (MQ=60)
TAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCA > SRR4302536.3869472/1‑94 (MQ=60)
TAGCCGGTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGGA > SRR4302536.4000915/1‑94 (MQ=60)
AGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAA < SRR4302536.3589648/94‑1 (MQ=60)
AGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAA > SRR4302536.2360114/1‑94 (MQ=60)
GCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAC > SRR4302536.1438066/1‑94 (MQ=60)
CCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACC > SRR4302536.2308094/1‑94 (MQ=60)
CCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACC < SRR4302536.565694/94‑1 (MQ=60)
CGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCCGCAACCA > SRR4302536.1346999/1‑94 (MQ=60)
GTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAG > SRR4302536.4457852/1‑94 (MQ=60)
TCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGC < SRR4302536.4253501/94‑1 (MQ=60)
CTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCA > SRR4302536.1005808/1‑94 (MQ=60)
CTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCA < SRR4302536.5308367/94‑1 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT > SRR4302536.4959750/1‑94 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT > SRR4302536.5538022/1‑94 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT < SRR4302536.2821140/94‑1 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT < SRR4302536.4563463/94‑1 (MQ=60)
TCTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA > SRR4302536.3698950/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA > SRR4302536.4602833/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA > SRR4302536.4535875/1‑94 (MQ=60)
CTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAC < SRR4302536.5200859/94‑1 (MQ=60)
CTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAC < SRR4302536.3093810/94‑1 (MQ=60)
TTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACC > SRR4302536.2098851/1‑94 (MQ=60)
TTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAACAGGCAATACC > SRR4302536.4699516/1‑94 (MQ=60)
TAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCC < SRR4302536.3598787/94‑1 (MQ=60)
TAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCC > SRR4302536.3073937/1‑94 (MQ=60)
TAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCC > SRR4302536.6011281/1‑94 (MQ=60)
AACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCA > SRR4302536.5073973/1‑94 (MQ=60)
ACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAG < SRR4302536.3004458/94‑1 (MQ=60)
CAGCAGCCCTTTACGTGCAAAGCGGGAATGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGG < SRR4302536.6255253/94‑1 (MQ=60)
CAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGG < SRR4302536.217393/94‑1 (MQ=60)
AGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGA > SRR4302536.1981420/1‑94 (MQ=60)
AGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGA > SRR4302536.1126011/1‑94 (MQ=60)
GCAGACCTTTACCTGCAAAGCGGGAAAGGACTGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAA < SRR4302536.1599712/94‑1 (MQ=60)
GCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAA < SRR4302536.6774607/94‑1 (MQ=60)
CAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAC < SRR4302536.5024503/94‑1 (MQ=60)
CAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAC < SRR4302536.4283948/94‑1 (MQ=60)
AGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACG > SRR4302536.3827593/1‑94 (MQ=60)
AGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACG > SRR4302536.3323610/1‑94 (MQ=60)
AGACCTTTACCCGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACG < SRR4302536.6290282/94‑1 (MQ=60)
ACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGC > SRR4302536.2260057/1‑94 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT < SRR4302536.2128085/94‑1 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT < SRR4302536.4579781/94‑1 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT > SRR4302536.6612128/1‑94 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT < SRR4302536.4279211/94‑1 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT > SRR4302536.6612127/1‑94 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT > SRR4302536.4505976/1‑94 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT < SRR4302536.5857779/94‑1 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT > SRR4302536.494882/1‑94 (MQ=60)
TTTACCTGCAAAGCGGTAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG < SRR4302536.4533094/94‑1 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG < SRR4302536.3654404/94‑1 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG < SRR4302536.5646491/94‑1 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG < SRR4302536.4242587/94‑1 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG < SRR4302536.70580/94‑1 (MQ=60)
ACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACG > SRR4302536.2748693/1‑94 (MQ=60)
ACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACG < SRR4302536.5043435/94‑1 (MQ=60)
CTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑A > SRR4302536.1412508/1‑94 (MQ=60)
CTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑A < SRR4302536.2170806/94‑1 (MQ=60)
GCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACA < SRR4302536.434606/94‑1 (MQ=60)
CAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGCACGGCTTGACGACACA > SRR4302536.427097/1‑94 (MQ=60)
CAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACAC > SRR4302536.841883/1‑94 (MQ=60)
CAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACAC > SRR4302536.3705025/1‑94 (MQ=60)
CAAAGCGGGAAAGGACGGCCGGGATGGTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACTGCTTGAgccaaaa > SRR4302536.2430320/1‑87 (MQ=60)
AAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGGTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCACGAAGAGCTTGACGA‑ACACT > SRR4302536.215451/1‑94 (MQ=60)
AAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTT > SRR4302536.3254551/1‑94 (MQ=60)
AAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTT < SRR4302536.6149908/94‑1 (MQ=60)
AAGCGGGAAAGGACGGCCGGGATGGTCATCATTGAGTTCAGGGGATCGGGCTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑AGACTT > SRR4302536.834803/1‑94 (MQ=60)
AGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTACAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTT < SRR4302536.2826479/94‑1 (MQ=60)
GCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGC‑ACACTTTG > SRR4302536.2906289/1‑94 (MQ=60)
GCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTG < SRR4302536.1045829/94‑1 (MQ=60)
CGGGAAAGGACGGCCGGAATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGT < SRR4302536.15074/94‑1 (MQ=60)
GGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTC > SRR4302536.4949869/1‑94 (MQ=60)
GGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCA < SRR4302536.5840947/94‑1 (MQ=60)
GGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCA > SRR4302536.713200/1‑94 (MQ=60)
GGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCA > SRR4302536.6116452/1‑94 (MQ=60)
AAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATA < SRR4302536.2220995/94‑1 (MQ=60)
AAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATA > SRR4302536.6215513/1‑94 (MQ=60)
AAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATA > SRR4302536.5540388/1‑94 (MQ=60)
AAGGACGGCTGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATAC > SRR4302536.5225669/1‑94 (MQ=60)
AAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATAC > SRR4302536.6431735/1‑94 (MQ=60)
AAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATAC > SRR4302536.6109656/1‑94 (MQ=60)
AAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATAC < SRR4302536.2357381/94‑1 (MQ=60)
AGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATACA > SRR4302536.2945103/1‑94 (MQ=60)
AGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATACA < SRR4302536.4829421/94‑1 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATACAA > SRR4302536.2907305/1‑94 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGAAACGGCTTGACCG‑ACACTTTGTCATACAG > SRR4302536.3689580/1‑94 (MQ=60)
GACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATACAGC < SRR4302536.4509120/94‑1 (MQ=60)
|
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA‑ACACTTTGTCATACAGC > NC_000913/2391255‑2391438
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
