Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F54 I0 R1
|
640 |
319.5 |
10493376 |
95.3% |
10000187 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
1,649,456 |
C→T |
19.6% |
intergenic (‑58/+148) |
rspA ← / ← ynfA |
bifunctional D‑altronate/D‑mannonate dehydratase/UPF0060 family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 1,649,456 | 0 | C | T | 19.6%
| 635.7
/ 137.6
| 261 | intergenic (‑58/+148) | rspA/ynfA | bifunctional D‑altronate/D‑mannonate dehydratase/UPF0060 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (105/104); new base T (20/31); total (126/135) |
| Fisher's exact test for biased strand distribution p-value = 1.64e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 274 total aligned reads displayed.
GGCCCGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCT > CP009273/1649308‑1649605
|
ggCCCTTAATACCTTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAATACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCTTGAAATCTACGCAACTGAGCTACTAcc < 2:37064/150‑1 (MQ=255)
gCCCGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCa > 1:1911647/1‑150 (MQ=255)
cccGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCAt > 1:3285601/1‑150 (MQ=255)
ccGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGACATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCAGCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTCCTACCATa > 2:2288809/1‑150 (MQ=255)
cGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATAc < 1:3146321/150‑1 (MQ=255)
aTACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGt < 2:113090/150‑1 (MQ=255)
aTACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGt < 2:1804369/150‑1 (MQ=255)
aTACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGt < 2:2761818/150‑1 (MQ=255)
tACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGta > 2:2522124/1‑150 (MQ=255)
aCCGTCCTCAGTGGTGATTTTTAATGTGACGTAATTACGCCCCGGACAGGTAACAAAATCTTCAGCCTTTACGATCTTCTTGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGtat < 1:5206687/150‑1 (MQ=255)
cgaccTCAGTGGTCATTTTTAATGTGACGAAATAACGCCCCGGACAGGTAACAAAAACTTCAGCCTGTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATaa < 2:3091281/147‑1 (MQ=255)
cGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAACAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCATCTGAGCTACTACCATACAAGTATaa < 2:1691340/150‑1 (MQ=255)
tCCTCAGTGGTGTTTATTAATGTGACGAAATTACGACCCGGACATGTAAAATAAACTTCAGCCTTTACTATCTTTATGTTCGATTCCTTGCATCGCTTGTAGTGATGCATGATATCTACGCAACTGAGCTTCTACCATACTATTATTAAg < 2:4358885/150‑1 (MQ=255)
tCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAg < 1:745883/150‑1 (MQ=255)
cTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGAt < 1:859186/150‑1 (MQ=255)
aGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTAACATACAAGTATAAAGATCGa > 2:5194608/1‑150 (MQ=255)
gtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGaaaaa < 2:3685855/150‑1 (MQ=255)
gtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGaaaaa < 2:739384/150‑1 (MQ=255)
gtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGATTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGaaaaa < 1:904651/150‑1 (MQ=255)
gATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAg < 1:2061682/150‑1 (MQ=255)
tttttAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGcc > 1:2665272/1‑150 (MQ=255)
ttttAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCg < 1:3568573/150‑1 (MQ=255)
tttAATGTGACGAAATTACGCCCCGGAAAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCgg < 2:2859180/150‑1 (MQ=255)
aaTGTGACGAAATTACGCCACGGACAGTTAACAACTACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGt < 2:3173330/150‑1 (MQ=255)
cGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATcac‑a > 2:586145/1‑150 (MQ=255)
gAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑aa > 1:895391/1‑150 (MQ=255)
aaTTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATAAC‑aaaa > 1:609302/1‑150 (MQ=255)
aTTACGCCCAGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑aaaaa < 2:2200167/150‑1 (MQ=255)
cGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAgg > 2:91004/1‑150 (MQ=255)
ccccGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTTCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCg > 1:1951816/1‑150 (MQ=255)
ccccGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCg < 2:3006698/150‑1 (MQ=255)
ccGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGta < 1:1291199/150‑1 (MQ=255)
cGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATTAAATCTACGCAACTGATCTACTACCATACAAGTATTAAGATCGAAAAAAGCCGGTGTGATCAC‑AAAAAAAGGCGtat < 2:132397/150‑1 (MQ=255)
cGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtat < 1:1338570/150‑1 (MQ=255)
ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata > 1:4317337/1‑150 (MQ=255)
ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata < 1:2239667/150‑1 (MQ=255)
ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata < 1:2179928/150‑1 (MQ=255)
ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTACTTGCATCGCTTGTAGTGATTCATGAAATCTACGCAAATGAGCTAATACCATACAATTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata > 2:1941649/1‑150 (MQ=255)
gACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTatat < 2:4658880/150‑1 (MQ=255)
aCAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtagagt > 2:1122065/1‑146 (MQ=255)
aCAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATAtt < 1:2372854/150‑1 (MQ=255)
aCAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATAtt < 1:4399172/150‑1 (MQ=255)
cAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATAttt > 2:1181114/1‑150 (MQ=255)
gTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGGATATTTgcg > 2:2113349/1‑150 (MQ=255)
tAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTgcgc > 2:3856924/1‑150 (MQ=255)
aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCtgtg < 2:4170433/150‑1 (MQ=255)
aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAATATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAATGGCGTATATTTGCGCtgtg > 1:3094940/1‑150 (MQ=255)
aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTNGCANCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAATATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCtgtg > 1:1335760/1‑150 (MQ=255)
aaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGa > 1:3462582/1‑150 (MQ=255)
aaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGaa > 1:1024673/1‑150 (MQ=255)
aaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAAt < 1:2833528/150‑1 (MQ=255)
aaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAAt > 1:646993/1‑150 (MQ=255)
tCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGtt < 1:1702768/150‑1 (MQ=255)
cAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTg > 1:3742864/1‑150 (MQ=255)
aGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGa < 1:147382/150‑1 (MQ=255)
aGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGAGTATATTTGCGCTGTGAATGGTTGa > 2:3567145/1‑150 (MQ=255)
ccTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACa > 1:3995804/1‑150 (MQ=255)
cTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaa > 2:4429836/1‑150 (MQ=255)
cTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaa > 1:1634749/1‑150 (MQ=255)
cTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaa > 1:1634931/1‑150 (MQ=255)
tttACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaaa < 1:4001464/150‑1 (MQ=255)
tttACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaaa > 1:1917439/1‑150 (MQ=255)
gATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATg > 1:2885516/1‑150 (MQ=255)
ttCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAAt > 2:3757063/1‑150 (MQ=255)
tCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATa < 1:5149159/150‑1 (MQ=255)
tGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGaa < 2:4862472/150‑1 (MQ=255)
gTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAAt > 2:3997706/1‑150 (MQ=255)
tCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATAc < 1:501321/150‑1 (MQ=255)
tCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATAc < 1:5127992/150‑1 (MQ=255)
cGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATAcc > 2:5122413/1‑150 (MQ=255)
tGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCa > 1:4331059/1‑150 (MQ=255)
gCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTTTCAg > 2:2070515/1‑150 (MQ=255)
gCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTAAg > 2:1826158/1‑150 (MQ=255)
aTCGCTTGTCTTTATGCATGAAATCTACGCAACTGAGCTAATATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGAAAAAAGATGAAATAGAATACCTTTTGTCAGCt < 1:4095660/150‑1 (MQ=255)
tCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTg < 2:3878077/150‑1 (MQ=255)
gCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGac > 2:2665680/1‑150 (MQ=255)
tGTCGTGATGCATGAAATCTACGCAAATGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACt < 1:4071946/150‑1 (MQ=255)
tGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctc > 2:4345492/1‑150 (MQ=255)
gATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctct < 1:3190905/150‑1 (MQ=255)
gATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctct < 1:3854661/150‑1 (MQ=255)
gATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctct > 1:4891717/1‑150 (MQ=255)
cATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatc < 1:4692432/150‑1 (MQ=255)
tGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatctt < 1:684555/150‑1 (MQ=255)
aaaTCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTcttatcttat < 1:2484481/150‑1 (MQ=255)
aaaTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTcttatcttat > 1:3480311/1‑150 (MQ=255)
aaTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTAtt > 1:2135030/1‑150 (MQ=255)
aaTCCACGCAACTGAGCTACTACCATACAAGGATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTAtt > 1:1085065/1‑150 (MQ=255)
aTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTg < 2:1475500/150‑1 (MQ=255)
cTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGAt < 1:2933646/150‑1 (MQ=255)
aCGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATaa > 1:2392101/1‑150 (MQ=255)
cAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAAt > 1:1590055/1‑150 (MQ=255)
aaCTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATg > 2:769120/1‑150 (MQ=255)
aCTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATgg < 2:1029842/150‑1 (MQ=255)
tGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAt > 1:722391/1‑150 (MQ=255)
gAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCACAAAAAAAAGGCGAATATTTGCGCTGTGAATGGTTTAAAAAAGATTAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAt > 2:4373247/1‑150 (MQ=255)
aGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAttt < 2:617023/150‑1 (MQ=255)
gCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTa < 1:1721502/150‑1 (MQ=255)
ctactaCCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGatatat > 2:2554730/1‑150 (MQ=255)
tactatCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATCCCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATg < 2:27971/150‑1 (MQ=255)
actatCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATCCCTTATGTCAGCTGACACTTCATCGTATCTGATTGATTAGATGGATGTAGGt > 2:3243174/1‑150 (MQ=255)
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GGCCCGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCT > CP009273/1649308‑1649605
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
