Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F534 I1 R1
|
1235 |
230.2 |
7611948 |
95.1% |
7238962 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP009273 |
1,858,693 |
T→A |
L196Q (CTG→CAG) |
yeaD → |
D‑hexose‑6‑phosphate epimerase‑like protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 1,858,693 | 0 | T | A | 100.0%
| 656.9
/ NA
| 195 | L196Q (CTG→CAG) | yeaD | D‑hexose‑6‑phosphate epimerase‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (108/87); total (108/87) |
Only 100 of 195 total aligned reads displayed.
AAATCGATCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACTGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGG > CP009273/1858549‑1858839
|
aaaTCGATCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGTATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCg > 2:3194499/1‑150 (MQ=255)
aaaTCGATCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCg < 2:3656373/150‑1 (MQ=255)
tCGATCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATg < 2:1549883/150‑1 (MQ=255)
aTCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTa < 2:2145465/150‑1 (MQ=255)
cTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTAtt > 1:3495732/1‑150 (MQ=255)
aTCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGAc < 1:2683326/150‑1 (MQ=255)
aTCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGAc > 2:270215/1‑150 (MQ=255)
tCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGAGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGAcc < 1:1110236/150‑1 (MQ=255)
cacaTGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCt < 2:1969176/150‑1 (MQ=255)
acaTGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTACCGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCtt < 2:3445128/150‑1 (MQ=255)
acaTGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCtt < 2:3261413/150‑1 (MQ=255)
caTGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTc < 2:1577487/150‑1 (MQ=255)
ggCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAATATGTACAGACCGATGGTATTCAGACCTTCCCt > 2:3467968/1‑150 (MQ=255)
ggCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCt > 1:646252/1‑150 (MQ=255)
ggCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCt < 2:2780140/150‑1 (MQ=255)
ggCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCt < 2:3450674/150‑1 (MQ=255)
cGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGa > 2:1786072/1‑150 (MQ=255)
gAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGAc > 2:3201384/1‑150 (MQ=255)
gAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGAc > 2:1302842/1‑150 (MQ=255)
aaTTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGAcc < 1:3668829/150‑1 (MQ=255)
aTTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCg > 1:213281/1‑150 (MQ=255)
aTTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCg < 1:1282396/150‑1 (MQ=255)
aTTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCg > 1:3204950/1‑150 (MQ=255)
gAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTAcc < 2:2244749/150‑1 (MQ=255)
aaaCCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCg > 1:3081549/1‑150 (MQ=255)
aaCCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGa < 1:3051492/150‑1 (MQ=255)
accaccTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGAt > 2:820656/1‑150 (MQ=255)
ccaccTCTGCCCTGCATACCTACTTTTACGTGGGTGATATCGCTTAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATc < 1:3654907/150‑1 (MQ=255)
ccaccTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATc < 1:2464515/150‑1 (MQ=255)
caccTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATTACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATcg > 1:1010223/1‑150 (MQ=255)
caccTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATcg > 1:2911523/1‑150 (MQ=255)
accTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATcgc > 1:1990213/1‑150 (MQ=255)
accTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATcgc > 1:2402281/1‑150 (MQ=255)
accTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATcgc > 1:1117717/1‑150 (MQ=255)
ctctGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCgt > 1:2185168/1‑150 (MQ=255)
tGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTa > 2:1890123/1‑150 (MQ=255)
gCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTAt < 2:2855455/150‑1 (MQ=255)
cccTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATc > 2:1994890/1‑150 (MQ=255)
ccTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCt > 2:972806/1‑150 (MQ=255)
cTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTg < 2:773306/150‑1 (MQ=255)
cATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAAt > 2:2255738/1‑150 (MQ=255)
cATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAAt > 2:950827/1‑150 (MQ=255)
aTACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATc > 1:1807897/1‑150 (MQ=255)
tACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATcc < 2:1535472/150‑1 (MQ=255)
tACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATcc > 2:340334/1‑150 (MQ=255)
aCCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCca > 2:3320370/1‑150 (MQ=255)
cTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCcaca < 1:1290930/150‑1 (MQ=255)
cTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCcaca < 2:646252/150‑1 (MQ=255)
tAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTg < 2:448659/150‑1 (MQ=255)
gTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGc < 1:1582278/150‑1 (MQ=255)
tGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCg < 2:1495808/150‑1 (MQ=255)
gggTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGt > 2:123511/1‑150 (MQ=255)
gggTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATAGCAGCGt > 2:2143132/1‑150 (MQ=255)
tGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGAt < 1:477184/150‑1 (MQ=255)
tGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGAt < 2:2194304/150‑1 (MQ=255)
gATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGAtt < 1:44972/150‑1 (MQ=255)
atatCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTa > 2:561664/1‑150 (MQ=255)
atCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGGAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAat > 1:2334768/1‑150 (MQ=255)
atCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAat > 1:429332/1‑150 (MQ=255)
atCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAat < 1:1906536/150‑1 (MQ=255)
cGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAatga > 2:231720/1‑150 (MQ=255)
cTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAatgatg < 2:354327/150‑1 (MQ=255)
cTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAatgatg > 1:2060036/1‑150 (MQ=255)
aaGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGaa > 1:2720086/1‑150 (MQ=255)
aGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAg > 2:1070071/1‑150 (MQ=255)
aGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTg > 2:3560808/1‑150 (MQ=255)
gCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGa < 1:2053456/150‑1 (MQ=255)
gCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGa < 1:2092554/150‑1 (MQ=255)
cGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGaa < 2:728642/150‑1 (MQ=255)
cGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGaa < 2:2684533/150‑1 (MQ=255)
tCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATc < 2:521762/150‑1 (MQ=255)
tCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATc < 2:3750364/150‑1 (MQ=255)
aGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGt > 1:3738166/1‑150 (MQ=255)
tgggcGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCg > 2:2437135/1‑150 (MQ=255)
tgggcGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCg > 1:2317594/1‑150 (MQ=255)
ggcGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGcc > 2:396552/1‑150 (MQ=255)
gcGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCg < 2:1724773/150‑1 (MQ=255)
cGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCTTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGt < 1:746567/150‑1 (MQ=255)
gATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTa > 1:3354862/1‑150 (MQ=255)
tCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAgg > 2:931598/1‑150 (MQ=255)
gCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGcc > 1:3536503/1‑150 (MQ=255)
tCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGccacc > 1:3651338/1‑150 (MQ=255)
tCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGccacc > 1:3260214/1‑150 (MQ=255)
cATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCAACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGccacca > 2:1855012/1‑150 (MQ=255)
tAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGcatca < 1:360583/150‑1 (MQ=255)
aaaGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGcatcat > 1:1667090/1‑150 (MQ=255)
aaGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCatcatc > 1:3304037/1‑150 (MQ=255)
aGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCt < 2:1141705/150‑1 (MQ=255)
gTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTg < 2:2468093/150‑1 (MQ=255)
aaTGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAAc < 2:743353/150‑1 (MQ=255)
gACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGtt > 1:1449136/1‑150 (MQ=255)
aCGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTg < 2:84876/150‑1 (MQ=255)
cgAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCg < 2:2610829/150‑1 (MQ=255)
cgAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCg < 2:2532110/150‑1 (MQ=255)
aaagaaaATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGc > 1:2469491/1‑150 (MQ=255)
aagaaaATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCt < 2:2185168/150‑1 (MQ=255)
gaaaATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTgg > 2:1606317/1‑150 (MQ=255)
gaaaATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTgg > 1:929708/1‑150 (MQ=255)
gaaaATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTgg > 1:2074356/1‑150 (MQ=255)
tACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCgg > 1:2760647/1‑150 (MQ=255)
|
AAATCGATCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACTGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGG > CP009273/1858549‑1858839
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACTGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGAC > CP009273/1858557‑1858842
|
CTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATT > SRR19973061.3504664/1‑150 (MQ=60)
TGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCA > SRR19973061.30863/1‑150 (MQ=60)
ATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGAC < SRR19973061.2690232/150‑1 (MQ=60)
TCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGAGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACC < SRR19973061.1113079/150‑1 (MQ=60)
GGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCT > SRR19973061.647909/1‑150 (MQ=60)
AATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACC < SRR19973061.3678210/150‑1 (MQ=60)
ATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCG > SRR19973061.3213185/1‑150 (MQ=60)
ATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCG < SRR19973061.1285566/150‑1 (MQ=60)
ATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCG > SRR19973061.213913/1‑150 (MQ=60)
ATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCG > SRR19973061.2128020/1‑150 (MQ=60)
TGAAACCACCTCTGCCCTTCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTTGGCGATCGCTTCAGTGATAAAGTTAATGACGAGAAAGAAAATGTACAGACCGATGGTATACAGACCTTCCCTGACCGTAC < SRR19973061.3360105/150‑1 (MQ=60)
AAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCG > SRR19973061.3089495/1‑150 (MQ=60)
AACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGA < SRR19973061.3059376/150‑1 (MQ=60)
CCACCTCTGCCCTGCATACCTACTTTTACGTGGGTGATATCGCTTAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATC < SRR19973061.3664247/150‑1 (MQ=60)
CCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATC < SRR19973061.2470790/150‑1 (MQ=60)
CACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATTACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGAACGTACCGATCG > SRR19973061.1012800/1‑150 (MQ=60)
CACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCG > SRR19973061.2918995/1‑150 (MQ=60)
ACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGC > SRR19973061.2408413/1‑150 (MQ=60)
ACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGC > SRR19973061.1120575/1‑150 (MQ=60)
ACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGC > SRR19973061.1995197/1‑150 (MQ=60)
ACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGC > SRR19973061.3092449/1‑150 (MQ=60)
CCTCTGCCCTGCATACCTACTTTAACGTGGGTGATTTCGCTATGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCTTTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGACCGCG < SRR19973061.1345243/150‑1 (MQ=60)
CCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCG < SRR19973061.1758801/150‑1 (MQ=60)
CTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGT > SRR19973061.2190691/1‑150 (MQ=60)
CTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGT > SRR19973061.2190665/1‑150 (MQ=60)
GCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTAT > SRR19973061.112090/1‑150 (MQ=60)
GCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTAT > SRR19973061.1646627/1‑150 (MQ=60)
GCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAA > SRR19973061.568112/1‑150 (MQ=60)
ATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATC > SRR19973061.1812412/1‑150 (MQ=60)
ACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCA > SRR19973061.3675932/1‑150 (MQ=60)
CTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACA < SRR19973061.3055179/150‑1 (MQ=60)
CTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACA < SRR19973061.1294131/150‑1 (MQ=60)
TACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAA > SRR19973061.85173/1‑150 (MQ=60)
TTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATT > SRR19973061.2001533/1‑150 (MQ=60)
TTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACAGTACCGATCGCGTGTATCTGAATCCACAAGATT > SRR19973061.2351423/1‑150 (MQ=60)
CGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAG < SRR19973061.2455042/150‑1 (MQ=60)
GTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGC < SRR19973061.3741374/150‑1 (MQ=60)
GTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGC < SRR19973061.1478095/150‑1 (MQ=60)
GTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGC < SRR19973061.1586207/150‑1 (MQ=60)
GGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTG > SRR19973061.2324940/1‑150 (MQ=60)
GGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTG > SRR19973061.1251197/1‑150 (MQ=60)
TGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGAT < SRR19973061.478468/150‑1 (MQ=60)
GATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATT < SRR19973061.45143/150‑1 (MQ=60)
ATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGGAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAAT > SRR19973061.2340696/1‑150 (MQ=60)
ATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAAT > SRR19973061.430499/1‑150 (MQ=60)
ATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAAT < SRR19973061.1911257/150‑1 (MQ=60)
TCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATG > SRR19973061.3527778/1‑150 (MQ=60)
CGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGA > SRR19973061.3398425/1‑150 (MQ=60)
CTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATG > SRR19973061.2065222/1‑150 (MQ=60)
CTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATG > SRR19973061.2065171/1‑150 (MQ=60)
AAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAA > SRR19973061.2727087/1‑150 (MQ=60)
GCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGA < SRR19973061.3562387/150‑1 (MQ=60)
GCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGA < SRR19973061.2097813/150‑1 (MQ=60)
GCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGA < SRR19973061.2097798/150‑1 (MQ=60)
GCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGA < SRR19973061.2058622/150‑1 (MQ=60)
TGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAA > SRR19973061.2146589/1‑150 (MQ=60)
GTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAAT > SRR19973061.738887/1‑150 (MQ=60)
AGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGT > SRR19973061.3747732/1‑150 (MQ=60)
AGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGT > SRR19973061.3262746/1‑150 (MQ=60)
GGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTA < SRR19973061.2793487/150‑1 (MQ=60)
TGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCG > SRR19973061.2323477/1‑150 (MQ=60)
CGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCTTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGT < SRR19973061.748527/150‑1 (MQ=60)
GATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCATACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTA > SRR19973061.1287190/1‑150 (MQ=60)
GATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTA > SRR19973061.3363490/1‑150 (MQ=60)
GATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTA < SRR19973061.3638626/150‑1 (MQ=60)
GCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCC > SRR19973061.3545561/1‑150 (MQ=60)
TCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACC > SRR19973061.3268616/1‑150 (MQ=60)
TCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACC > SRR19973061.3268609/1‑150 (MQ=60)
TCATTGATAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACC > SRR19973061.3660668/1‑150 (MQ=60)
TCATTGATAAAGAGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTCTCTGAATCCACAAGATTGCAGCGTGATTCATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACC > SRR19973061.3660669/1‑150 (MQ=60)
TAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCA < SRR19973061.361563/150‑1 (MQ=60)
TAAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCGTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCA < SRR19973061.270956/150‑1 (MQ=60)
AAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCAT > SRR19973061.434851/1‑150 (MQ=60)
AAAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCAT > SRR19973061.1671273/1‑150 (MQ=60)
AAGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATC > SRR19973061.3312552/1‑150 (MQ=60)
AGTGAATGACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCT < SRR19973061.2073825/150‑1 (MQ=60)
GACGCGAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTT > SRR19973061.1452793/1‑150 (MQ=60)
GAAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGG > SRR19973061.3771641/1‑150 (MQ=60)
AAAGAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGC > SRR19973061.2475779/1‑150 (MQ=60)
GAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGG > SRR19973061.932080/1‑150 (MQ=60)
GAAAATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGG > SRR19973061.2079562/1‑150 (MQ=60)
AATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAAC > SRR19973061.2534535/1‑150 (MQ=60)
AATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAAC > SRR19973061.1836375/1‑150 (MQ=60)
ATGTACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACC < SRR19973061.1962345/150‑1 (MQ=60)
TACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGG > SRR19973061.2767755/1‑150 (MQ=60)
TACAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGG > SRR19973061.2767680/1‑150 (MQ=60)
CAGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGA > SRR19973061.735006/1‑150 (MQ=60)
AGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGAC < SRR19973061.2154328/150‑1 (MQ=60)
AGACCCATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGAC > SRR19973061.410882/1‑150 (MQ=60)
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CTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACTGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGAC > CP009273/1858557‑1858842
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |