| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 209,618 | A→C | A267A (GCA→GCC) | tilS → | tRNA lysidine(34) synthetase TilS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 209,618 | 0 | A | C | 100.0% | 64.5 / NA | 19 | A267A (GCA→GCC) | tilS | tRNA lysidine(34) synthetase TilS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (11/8); total (11/8) | |||||||||||
CTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGC > NZ_CP009273/209538‑209705 | cTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCtt > 2:744881/1‑91 (MQ=255) tgCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGAcgc > 2:726784/1‑91 (MQ=255) tgCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGAcgc > 2:256188/1‑91 (MQ=255) tgCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGAcg < 2:847707/90‑1 (MQ=255) tgCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGAcg > 1:847707/1‑90 (MQ=255) aaTGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTg > 2:402414/1‑91 (MQ=255) gATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATc < 2:776074/91‑1 (MQ=255) tGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTg > 1:632616/1‑91 (MQ=255) gCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGt < 2:1125534/70‑1 (MQ=255) gCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGt > 1:1125534/1‑70 (MQ=255) cgcgcgGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGtggcgc > 2:507823/1‑91 (MQ=255) gcgcgGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGtggcgct < 2:581935/91‑1 (MQ=255) tCCGCCGCTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGa < 1:726784/91‑1 (MQ=255) gccgcTGGCTGGCAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGc > 1:244208/1‑91 (MQ=255) ggctggcAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCAcc > 1:1102275/1‑91 (MQ=255) gctggcAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCAccc < 1:699550/91‑1 (MQ=255) gctggcAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCAccc < 2:790459/91‑1 (MQ=255) ctggcAGGGCAGAATGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCt > 1:346379/1‑91 (MQ=255) tGCCCCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGgc < 2:346379/91‑1 (MQ=255) | CTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGC > NZ_CP009273/209538‑209705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |