| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,235,687 | A→T | 9.0% | intergenic (+30/+22) | fadR → / ← ycgB | fatty acid metabolism regulon transcriptional regulator/SpoVR family stationary phase protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,235,687 | 0 | A | T | 9.0% | 223.2 / 8.2 | 77 | intergenic (+30/+22) | fadR/ycgB | fatty acid metabolism regulon transcriptional regulator/SpoVR family stationary phase protein |
| Reads supporting (aligned to +/- strand): ref base A (40/30); new base T (3/4); total (43/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01 | |||||||||||
TGAAGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGACTTCTTTGCGCCCC > NC_000913/1235540‑1235835 | tGAAGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTAAGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCaaa > 8:179254/1‑149 (MQ=255) aaGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAAc > 3:231181/1‑148 (MQ=255) aGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGTTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGa < 2:183115/149‑1 (MQ=255) aGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCGCTTCCGTTTAAAGAGCAAACCCCTCAAAc > 1:179488/1‑147 (MQ=255) aGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCTAACCCCTCAAACGa < 8:116766/149‑1 (MQ=255) aGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGa < 2:172302/149‑1 (MQ=255) gcACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCGTTTGAGGGG‑tt < 3:191729/149‑1 (MQ=255) aCGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑tttt > 5:308386/1‑149 (MQ=255) cGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑ttttt < 7:138013/149‑1 (MQ=255) aTCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCGTTTGAGGGG‑tttgctc < 3:368773/149‑5 (MQ=255) tCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTttgt > 5:89358/1‑149 (MQ=255) aagAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTa > 2:9618/3‑149 (MQ=255) cGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTa > 5:149381/1‑148 (MQ=255) cGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTa < 7:183490/148‑1 (MQ=255) gAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTa > 6:27120/1‑147 (MQ=255) aaCAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑tttt > 2:4572/1‑133 (MQ=255) aaCAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑tttt < 1:4572/133‑1 (MQ=255) tGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTcc > 8:274761/1‑149 (MQ=255) cGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTc > 5:290382/1‑149 (MQ=255) cTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCtt > 4:333253/1‑149 (MQ=255) tGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCtt > 5:266536/1‑146 (MQ=255) tGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCtt < 6:266536/146‑1 (MQ=255) tGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGc > 3:188229/1‑149 (MQ=255) ggCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCgg < 7:274761/149‑1 (MQ=255) gCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGc < 6:399332/146‑1 (MQ=255) gCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGc > 5:399332/1‑146 (MQ=255) gCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCggg < 1:9618/149‑1 (MQ=255) gCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCggg > 2:352868/1‑149 (MQ=255) tGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTcc < 6:308386/149‑1 (MQ=255) gCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGGGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAg < 2:24327/149‑1 (MQ=255) cGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAg > 7:356730/1‑148 (MQ=255) aTTTGGCAGCGGATGCAGAAATATCTGCCGGTTGATTTAGCGATTCAGGGGCGATAATCCCTTCAGTTTAAAGAGCTAACCCCTCAAACGAGTGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAAc < 8:92913/148‑1 (MQ=255) tttGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTc > 1:301046/1‑149 (MQ=255) ggCACCGTATGCAGAAAAATCTGCCGGGTTATTTAGCCATTCAGGGGCTATAATCCCTTCCGTTTAAACCGCAAACCCCACAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGa < 2:179488/148‑1 (MQ=255) gCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGAt < 7:179254/148‑1 (MQ=255) aCCGGATGCAGAAAAAACAGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TGTTTTGTTGATTATACAGCGTTCCCATTCTTGGCGGGCAACGTTCCAGCACCTCGAtgcg > 6:304061/1‑148 (MQ=255) aGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTTCCGTCTTc > 7:83410/1‑149 (MQ=255) aGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTc < 5:210338/149‑1 (MQ=255) aGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTc > 7:238055/1‑149 (MQ=255) gAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCg > 2:19473/1‑149 (MQ=255) aaaaTCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGtt < 6:149381/149‑1 (MQ=255) tCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGc > 3:330892/1‑149 (MQ=255) tGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTg > 3:255306/1‑149 (MQ=255) ccGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTc < 5:63018/114‑1 (MQ=255) ccGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTc > 6:63018/1‑114 (MQ=255) ggTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGa < 4:255306/149‑1 (MQ=255) aTTTAGCCATTCAGGGGCGATAATCACTTCCGTTTAAAGAGCAAACCCCTCAAACGAGCGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGcat > 6:375496/1‑149 (MQ=255) ttAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTg > 5:46550/1‑135 (MQ=255) ttAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTg < 6:46550/135‑1 (MQ=255) aTTCATGGTCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGcc < 8:294301/117‑1 (MQ=255) aTTCAGGGGCGATAATCCCTTCCGTTTAAAGATCAAACCCCTCAAACGATGGG‑TTTTTTGGTGTTTTTACAGATTTCCCAGTCTTGGCGGGCAACGTTCCAGCAACTAGATGCTGcc > 7:294301/1‑117 (MQ=255) cAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATc > 6:1246/1‑149 (MQ=255) aGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTAACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATcc > 6:300891/1‑149 (MQ=255) ggggCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATccc < 8:356730/149‑1 (MQ=255) gCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCcac < 4:231181/149‑1 (MQ=255) aTAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAgg > 6:380282/1‑149 (MQ=255) tCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGcatcacat < 8:65541/131‑1 (MQ=255) tCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGcatcacat > 7:65541/1‑131 (MQ=255) cccTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGa > 1:205757/1‑147 (MQ=255) cccTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGa < 2:205757/147‑1 (MQ=255) ccTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATg < 5:380282/148‑1 (MQ=255) ccGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGcac < 4:188229/147‑1 (MQ=255) aaGAGCAATCCCCTCAAACGAGGGG‑TTTTTTGTTGTTGTTACAGAATTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATACCCACAGGCGATGCACATGCTTCAg < 6:290382/149‑1 (MQ=255) gagCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCACCTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGa > 5:151656/1‑149 (MQ=255) gagCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGa > 5:157687/1‑149 (MQ=255) gagCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTATTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGa > 7:182489/1‑149 (MQ=255) aaaaaaCCCCTCGTTTGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGcatcacatc < 6:128837/113‑1 (MQ=255) aaaaaaCCCCTCGTTTGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGcatcacatc > 5:128837/4‑116 (MQ=255) aaaaCCCCTCGTTTGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGc > 6:399745/2‑97 (MQ=255) aaaaCCCCTCGTTTGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGc < 5:399745/96‑1 (MQ=255) aaaaCCCCTCGTTTGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGAct > 2:42975/2‑148 (MQ=255) aaaCCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCACCTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGActtc < 1:83666/149‑1 (MQ=255) aaCCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGActtct > 8:227048/1‑149 (MQ=255) aCCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGActtctt > 3:108443/1‑149 (MQ=255) ccccTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGACTTCttt < 8:377397/149‑1 (MQ=255) cccTCAAACGAGGGGTTTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGACTTCttt > 4:383601/1‑149 (MQ=255) tCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGACTTCTTTgcgc > 6:156186/1‑149 (MQ=255) cAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGACTTCTTTGCGcc > 5:389178/1‑149 (MQ=255) aaCGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGACTTCTTTGCGcccc < 4:330892/149‑1 (MQ=255) | TGAAGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAATCCCTTCCGTTTAAAGAGCAAACCCCTCAAACGAGGGG‑TTTTTTGTTGTTTTTACAGATTTCCCATTCTTGGCGGGCAACGTTCCAGCAACTCGATGCTGCCGTCTTCGTTTTGCTGTTCGAGCATCACATCAAATCCCCACAGGCGATGCACATGCTTCAGGACTTCTTTGCGCCCC > NC_000913/1235540‑1235835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |