| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 CDS (putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase) ← / ← PP_3395 CDS (Transcriptional regulator_ LysR family) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 3,845,703 | 1 | . | G | 96.2% | 1536.9 / 45.6 | 398 | intergenic (‑70/+28) | PP_3394 CDS (putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase)/PP_3395 CDS (Transcriptional regulator_ LysR family) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (0/15); new base G (283/98); total (285/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.35e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 433 total aligned reads displayed.
GCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGC‑GGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAT > AE015451_phaM1/3845567‑3845833 | gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcgc < 2:5492690/137‑1 (MQ=255) cATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcgc‑g < 1:15871660/137‑1 (MQ=255) cATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcgc‑g < 1:15187954/137‑1 (MQ=255) cACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGC‑gggctga > 2:10612854/1‑132 (MQ=255) tGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGTGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCa < 1:1216596/137‑1 (MQ=255) tGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTAGTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCa < 1:5092581/137‑1 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCAt < 1:11835849/137‑1 (MQ=255) cAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATc > 2:3899293/1‑137 (MQ=255) aGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCg < 2:7441360/137‑1 (MQ=255) ggCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGt < 2:2586286/137‑1 (MQ=255) ggCTCTGCAAGCCACCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGt < 2:6499479/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 1:16392213/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 2:2860544/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 2:18015629/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 2:17505684/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 2:8831541/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 1:15344443/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 2:5025529/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 1:7474353/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTc < 2:15040168/137‑1 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAg < 1:441745/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGcc < 1:15689665/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGcc < 2:14371963/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGcc < 1:10768478/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGcc < 2:10656405/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGcc < 1:17810333/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCAGCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGcc < 2:11873415/137‑1 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCa < 1:10052645/137‑1 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCa > 2:6581759/1‑137 (MQ=255) caGCCATCGCGCAGGCCAACTTCATCGATTGTTCTTATTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTATTTCGCAGGCTG‑ATCCCTCTTCAGCCACg > 1:2311705/2‑137 (MQ=255) aaGCCATCGCGCAGGCCGACTTCGTTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGATTAAGAGCTGGATGCCGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACg > 2:9247388/1‑137 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACg > 2:12191443/1‑137 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACg > 2:5733228/1‑137 (MQ=255) aGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGa > 2:13782584/1‑137 (MQ=255) ccATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATg < 1:2913312/137‑1 (MQ=255) gcgcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCa > 2:4225363/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGc > 1:18757875/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGc > 1:11520342/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGc > 1:8217160/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGc > 2:18496254/1‑137 (MQ=255) cATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCAAGATGGA‑TCAGCCCGCGCCCTGcc > 1:12351118/1‑137 (MQ=255) attgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGcc > 2:10099476/1‑107 (MQ=255) ttattgttGTCATCGCGGTCTCTCTGTCTGCAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCAAGATGGA‑TCAGCCCGCGTCCTGCAAGGCCGGTg > 2:12728667/1‑137 (MQ=255) ttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCAATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTg < 2:18087971/137‑1 (MQ=255) tattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGc > 2:4554023/1‑137 (MQ=255) tattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGc > 2:3616985/1‑137 (MQ=255) attgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCa > 1:1818425/1‑137 (MQ=255) gttgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACgc > 1:10247870/1‑137 (MQ=255) tcccccgcgTTCTCTCTGCCGAAAGTGTGATGCCAGACAAAGAGTGGGGGGAAGGGAAGAAAGGATGTTTTTAGG‑GGGTGAACCCATCTTCGGCAAC‑AGGGAGTCACCCCGCGCCCTGCCAGGCCGGTGCACgcagc < 2:6100988/132‑1 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAGGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGTCACGATGGA‑TCAGCCCGCGCCCTTCCAGGCCGGTGCACGCAGCAAc > 1:16942725/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 1:9251556/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 1:4656498/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:16720324/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:15633519/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:12522232/1‑137 (MQ=255) cgcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAg > 1:13697767/1‑137 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTTCACGCAGCAACAgg > 2:6993012/1‑137 (MQ=255) ggTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtg > 1:14735412/1‑137 (MQ=255) ggTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtg > 1:2524597/1‑137 (MQ=255) ggTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCAGTGCACGCAGCAACAggtg > 2:7636309/1‑137 (MQ=255) ggTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACAATGGA‑TCAGCCCGCGCCCTGCCAGGCCAGTGCACGCAGCAACAggtg > 1:9597569/1‑137 (MQ=255) aGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTT‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccg > 1:18537702/1‑137 (MQ=255) aGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccg > 1:5771529/1‑137 (MQ=255) aGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccg > 2:6323152/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAACAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:1611168/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCCGCCACGATGGA‑TCAGCCCACGCCCTGCCAGGCCGGTGCACACAGAAACAGGTGGTCAAGCAGGCgccgag > 1:12840381/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCCGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:7062426/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:3708968/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:13526322/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCAAGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:14095807/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:3711511/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:17529548/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:6220492/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:14669829/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:13338092/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:7641761/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAAAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:6492264/1‑137 (MQ=255) cAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGTAGCAACAGGTGGTCAAGCAGGCGCCGAGCCAACAga > 2:13053721/1‑136 (MQ=255) cAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGc > 1:8650439/1‑137 (MQ=255) cAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAACCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGc > 1:16816116/1‑137 (MQ=255) gACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCga > 1:17360657/1‑137 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCgtgt > 2:16984607/1‑137 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCAAGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCgtgt > 2:17712527/1‑137 (MQ=255) aTGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCgg > 2:9816161/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACCGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 2:12420321/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 1:10532151/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:2721352/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:1939624/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:7206587/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 1:8508970/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:8136307/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAACAGGCGCCGAGCCGACAGCGAGAGCGCGTGCCGGTc > 2:15381538/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCGCGGGCCG‑ACCCATCGTCCGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGAGCCGAGCCGACAGCGAGGGCGTGTGCCGGTc > 1:12449819/1‑137 (MQ=255) gCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa > 2:15230145/1‑137 (MQ=255) gCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa > 2:9648597/1‑137 (MQ=255) gCAGAAAAGACGTGTTTCGCGGGCTG‑ATCCACCGTCAGCCACGATGGA‑TCCGCCCACGCCCTGCCAGGCCGGTGCACGCAACAACAGATGGTCAAGCAGGCGCCGAGCCGACAACGAGAGCGTGTGCCGGTCGCGCa > 1:351323/1‑137 (MQ=255) aaaGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TTAGCCCGAGCCCTGCCAGGCCAGTGCACACAGCAACAGGTGGTCAAGCAGGCGCCGAGTCGACAACGAGAACGCTTGCCGGTCGCGCATGccg > 1:1131030/1‑135 (MQ=255) aaaGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCCCGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAACGAGAGCGTGTTCCGGTCGCGCATGCAg > 1:7805826/1‑137 (MQ=255) aaaGACGTGTTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGAGAGAGCGTGTGCCGGTCGCGCATGCAg > 1:13386741/1‑137 (MQ=255) tgtTTCGCGGGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGa > 2:11467447/1‑137 (MQ=255) | GCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCGC‑GGCTG‑ATCCATCGTCAGCCACGATGGA‑TCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAT > AE015451_phaM1/3845567‑3845833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |