Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM14,675,3600TG36.5% 221.2 / 57.5 206intergenic (+59/+45)PP_4137 CDS (putative Outer membrane siderophore receptor)/chrR CDS (Chromate reductase)–/–
Reads supporting (aligned to +/- strand):  ref base T (71/54);  new base G (1/71);  total (72/134)
Fisher's exact test for biased strand distribution p-value = 8.69e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 208 total aligned reads displayed.

CGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCG  >  AE015451_phaM1/4675226‑4675493
                                                                                                                                       |                                                                                                                                     
tggcagggACAGTGCCTTTTCGACATCGGGTGAGGGGTTTGGTGTGGATGCCGGGGTTTCCTACATCTTCCGCGGAAGGGGGGGCGG‑GGGTTTACCCGCGAATGCGTCATTAAGTTTGCCGACACATTCGGGGGGaa                                                                                                                                     <  2:11441925/131‑1 (MQ=255)
cagCCAGGACAATGCCCGTTCGAAACCGGGCGAGGGGTTTGGCGTGGATGCTGGGGTTTCCTACAGCTTCCTTTGACGGGTGGTCGT‑GGGTTGACCTGCGAATGTTTCGTGGAATTTGCCGACGCGTTCGCGGGGaa                                                                                                                                     <  2:4249818/135‑1 (MQ=255)
cGGCCAGGACAATTCCCGTTCGACACCGGGCGAAGGATGTGGCGTGTATGCTGGGGTTTCCTACAGCTTCCGCTGACGGGGGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTaa                                                                                                                                     <  2:7372059/137‑1 (MQ=255)
cGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGTGTGGGCGC‑GGGGTTGCCCACCAACGCATTATTTGACTTTCCGACACATTCGCGGGtga                                                                                                                                     >  2:9238683/1‑135 (MQ=255)
cGGCCAGGACAACGCCCGTTCAAAACCAGGCGAAGAACTTGGCGTGTATGCCGGGGTTTCCTAAAGCTTCCGCTGACGGGTGGGCGC‑GGGGTTCCCCGCAGATTAGACATTTAATTTGCCAAAGCATTCGAGGGtta                                                                                                                                     >  2:18696114/1‑135 (MQ=255)
  gCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTGTGCCGGGGTTTCCTACAGCTTCCGCTGATGGTTGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTTCCGACGCGTTCGCGGGGaacc                                                                                                                                   <  2:2712781/137‑3 (MQ=39)
   ccggaaCAATTCCCGTTCGACACCGGGCGAAGGATTTGGTGTGTATGCTGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGT‑GGGTTTACCCGCGAATGCGTCGTGGAGTTTTCCGACGCGTTCGTGGGGAAAcc                                                                                                                                  <  2:10263923/132‑1 (MQ=255)
   ccAGAAAAAGGCCCGTTCGACACCGGGAGAGGGGTTGGGAGGGCAGGCAGGGGTTTCCTACAGCTCCCGTTGACGGTGGGGCAC‑GGGTTTACCCACGAATGCGTCATTGAATTTCCCGACGCGTTCGCGGTCAAAcc                                                                                                                                  <  2:17846497/137‑1 (MQ=255)
     aGGACAATGCCTGTTCAACACCGGGCGAAGGGTTTGGTGTGTATACTGGGGTTTCCTACAGCTTCTGCGGATGGGGGGGCGT‑GGGTTGACCCACGAATGCGTCGTGGAATTTGCCGACGCATTCGCGGGGAAACCCg                                                                                                                                <  2:14321224/137‑1 (MQ=25)
          actGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACACCTTCCTCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCGTGGAGTTTGCCGACGCGTTCGCGGGGAAACCCGCTCCt                                                                                                                           <  2:6679056/135‑1 (MQ=38)
           gtGCCCGTTCGACACCGGGCGAAGGGTTTGGTGTGTATGCTGGGGTTTCCGACAGCTTCCGTTGATGGGTGGGTGC‑GGGTTGACCCGCGAGTGCGTCGTGGAATTTCCCGACGCATTCGCGGGGAAACCCGCTCCTa                                                                                                                          <  1:3206271/136‑1 (MQ=255)
                ttttCGACACCGGGCGAAGGGTTTGGTGTGTATGCTGGGGTTTCCTACAGCTTCCGCGGATGGGGGGGCGT‑GGTTTGACCTGCGAATGCGTCGTGGACTTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAg                                                                                                                     <  1:9642761/135‑1 (MQ=255)
                cGTTCAACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACACATTCGCGGGTAAACCCGCTCCTACACAg                                                                                                                     <  1:17839500/137‑1 (MQ=255)
                  ttagACACCGGGAGAAGGGTTTGGTGTGGATGCCGGGTTCTCCTACAGCTTCTGCTGGCGGGTGGGCGT‑GGGTTTCCCAGAGAATGCTCTGTGGAGTTTTCGGACGCATTCGCGGGGAAACCCGCTCCTACACAggg                                                                                                                   <  1:714/134‑1 (MQ=255)
                         ctgggCGAAGGATTTTTCGGGTATGCAGGGGTTTCCTACAGCTTCCGCTGACGGGGGGGCGC‑GGGTTTACCCTCGAATTCTTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGc                                                                                                            <  2:8339417/135‑1 (MQ=37)
                         ccGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCTC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGc                                                                                                            <  2:515259/137‑1 (MQ=255)
                          cGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACATCTTCCGCTGAAGGGTGGTCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGca                                                                                                           <  2:16371880/137‑1 (MQ=255)
                          cGGGCGAAGGATTGGGCGTGTGTGCCGGGTTTTCCTACAACTTCCTCGGACGGGTGGGCTC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGca                                                                                                           <  2:12004061/137‑1 (MQ=37)
                           gtgCGAAGGGTTTGTCGTTTATCCCGGGGTTTCCTATACCTTCCGCTGAAGGGTGGGCGC‑GGGTTTACCCGTGAATGTGTCATTGAATTTGCCGACGCATTCGTGGGTAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:11175393/135‑1 (MQ=25)
                           gtgCGAAGGGTTTGGCGTGTATGCCGGGGTTTCCTACACCTTCCGCTGATGGGGGGGCGC‑GGGTTTACCCGCGAATGCGTCAGGGAATTTGCCGACGCATTCGTGGGTAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:8744898/135‑1 (MQ=37)
                           gggCGAAGGGTTTGGCTTGTAGGCTGGGTTTTCCTACATCTTCCGCGGATGGGGGGGCGC‑GGGTTTACCCGCGAATGTGTCGTGGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:6047942/137‑1 (MQ=25)
                           gggCGAAGGGTTTGGCGTTTGTGCCGGGGTTGCTTATATCTTCTGTGGACGGGTGGGCGC‑GGGTTTACTCGTGAATGTGTCATGGAGTTTGCCAACCCATTTGTGGGTAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  1:14597785/137‑1 (MQ=255)
                           gggCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGT‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:16916129/137‑1 (MQ=255)
                           gggCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCGGATGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCGTTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:15323626/137‑1 (MQ=255)
                                  gggtttGGCTTGTAGGCCGGGGTTTCCTACATCTTCCGCTGACGGGTGGGCGC‑GGTTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  2:18382037/134‑1 (MQ=38)
                                  gggtttGGCGTGGATGCCGGGGTTTCCTACAGCTTCCGCTGATGGGTGGGCGT‑GGGTTTACCCGTGAATGTGTCATGGAATTTGCCGACGCGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  1:13349522/134‑1 (MQ=255)
                                  ggATTTGGCGTGTATTCTGGGGTTTCCTACATCTTCCGCTGATGGGTGGGCGC‑GGGTTTACCCGCGAGTGTTTCGTGGAGTTTGCCGAAGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  1:10645555/137‑1 (MQ=255)
                                  ggATTTGGCGTGTATGCTGGGGTTTCCTACAGCTTCCGTTGATGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  1:8799301/137‑1 (MQ=255)
                                  ggATTTGGCGGGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  2:13121972/137‑1 (MQ=255)
                                  ggATTTGGAGTGTATGCCGGGGCTTCCTACAGCTCCCGCTGATGGGGGGGCGC‑GGTTTTACCCGCGAGTGCGTCATTGACTTTTCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  1:11651688/137‑1 (MQ=37)
                                        ggCGTTGATGTCGGGGTTTCCCACATCTTCCGCTGACGGGTGGGCGC‑GTGTTTACCCGAGAATGCTTCATTGAGTTTGCTGACGCGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAggg                                                                                             <  2:15834568/137‑1 (MQ=255)
                                            tgtATGCCGGGGTTTCCTACATCTTCCGTTGACGGGTGGGCGC‑GGGTTGACCCGCGAATTTGTCGTTGAGTTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTc                                                                                         <  2:12469201/137‑1 (MQ=38)
                                             gtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACACATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTc                                                                                         <  1:3540113/137‑1 (MQ=255)
                                               aTGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCTTCATTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGa                                                                                      <  2:13148816/137‑1 (MQ=255)
                                                ttctggggTTTCCTACAGCTTCCGTGGATGGGTGGGTGC‑GGGTTGACCCGCGAGTGTGTTGTTGAGTTTGCCGACGCGTTCGGGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAc                                                                                     <  1:8681865/133‑1 (MQ=255)
                                                 tccGGGTTTTCCTACAGCTTCTCTGGGCGGGTGGGCGC‑GGGTTTACCTGCGAATGCTTCGTTAAGTTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTATGGGTTCAGAcc                                                                                    <  2:17090609/136‑1 (MQ=25)
                                                 tccGGGTTCTCCCACATCTCCCGCTGACGGGTGGACGT‑GGGTTTACCCGCGAATGTGTCATTGAGTTTGCCGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  2:6973376/136‑1 (MQ=255)
                                                 gctggggTTTCCTACATCTTCCGTGGATGGGGGGGTGT‑GGGTTTACCCGGGAGTGCGTAGTGGAATTTGCCGACGCGTTCGTGGGGAACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  1:9380774/134‑1 (MQ=255)
                                                 gctggggTTCCCTACATCTTCCGCTGATGGGTGGGCGT‑GGGTTTACCCGCGAGTTCGTCGTGGAGTTTGCCGACGCGTTTGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  1:3484808/134‑1 (MQ=255)
                                                 gCCGGGGTTTCCTACGGCTTCCGCTAACGGGTGGGCGC‑GGGTTTACCCACGAATTCGTCATTGAATTTGCCGACACATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  2:15816693/137‑1 (MQ=255)
                                                 gCCGGGGTTTCCTACATCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCACGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  2:7606530/137‑1 (MQ=255)
                                                 gCCGGGGTTTCCGACAACTTCCGCTGAAGGGTGGGCGC‑GGGTTTACCCGCGAGTGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  2:347036/137‑1 (MQ=255)
                                                     gggTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCATGGAATTTGCCGACACATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGccc                                                                                <  2:14769375/137‑1 (MQ=255)
                                                      ggTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTGACCCGCGAGTGCGTCATTGAATTTTCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCt                                                                               <  2:13075965/137‑1 (MQ=255)
                                                             tACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTTCCCCACGAACGCGTCATTTAATTTTCCTACGCACTCTCGGGTAAACCCACCCCCCCACAAGGGAGTTTGACAGCAGGAGTGGGGGTTTCGACCACCCCGTTCaaa                                                                        >  2:18104999/1‑136 (MQ=255)
                                                                  cTTCCTTTGATGGGTGGGCGC‑GGGTTTACCCGAGAATGCTTCATGGAATTGGCCGACGCGTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                                                   <  1:2683468/137‑1 (MQ=255)
                                                                  cTTCCGTTGATGGGGGGGTGT‑GGGTTGACCTGCGAATTTTTCGTGGAATTTTCCGATGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                                                   <  1:18180613/137‑1 (MQ=255)
                                                                  cTTCCGTGGATGGGTGGGTGC‑GGGTTTACCCGCGAGTGTGTCGTGGAGTTTGCCGACGCGTTCGGGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                                                   <  1:1262827/137‑1 (MQ=255)
                                                                  cTTCCGCTGACGGGGGGGCGT‑GGGTTGACCCGCGAAGGCGTCGTGGAGTTTGCCAACGCGTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                                                   <  1:3622662/137‑1 (MQ=255)
                                                                            cGGGTGGGCGC‑GGGTTTACCCGCGAATGTGTCATGGAATTTGCAGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCa                                                         <  2:7908619/137‑1 (MQ=255)
                                                                              ggTGAGCCC‑GGGTCTACCCACAAATACGCCATTGAGTTTCCCGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCaaa                                                       <  2:18886305/137‑1 (MQ=255)
                                                                               gTGGGCGC‑GGGTTTACCCGCGAGTGCGTCGTTGAGTTTTCCGACGCGTTCGGGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAc                                                      <  1:16318449/137‑1 (MQ=255)
                                                                                tggttgc‑gGGTTCACCCGCGAAGTCTCCATTGAATTTGCCGACGCATTCGAGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAcc                                                     <  2:10934996/132‑1 (MQ=38)
                                                                                tGGGTGT‑GGGTTTACCCGCGAATGCGTCGTTGAGTTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAcc                                                     <  1:6093487/137‑1 (MQ=255)
                                                                                tGGGCGC‑GGGTTTACCCGGGACTGCGCCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGAGTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAcc                                                     <  1:12963308/137‑1 (MQ=255)
                                                                                   tcgc‑gGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGt                                                  >  1:649592/2‑137 (MQ=255)
                                                                                   tcgc‑gGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGt                                                  >  1:8351241/2‑137 (MQ=255)
                                                                                         ggTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACa                                             <  2:14665991/137‑1 (MQ=255)
                                                                                          gTTTACCCGCGAGTGCGTCGTTGAGTTTGCCGACGCATTCGCGGGCAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACaa                                            <  2:17245353/137‑1 (MQ=255)
                                                                                           tttACCCGCGAATGCTTCGTTGAATTTGCCGACGCATTTGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACaaa                                           <  2:2532641/137‑1 (MQ=39)
                                                                                            ttACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAAc                                          >  1:2715163/1‑137 (MQ=255)
                                                                                             tACCCGCGAGTGCGTCATGGAGTTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACg                                         <  1:1960939/137‑1 (MQ=255)
                                                                                             tACCCGCGAATGCGTCATTGAATTTGCTGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTTTCGACAAACg                                         <  2:2123155/137‑1 (MQ=255)
                                                                                             tACCCGCGAATGCGTCATGGAATTTGCCGACGCATTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACg                                         <  1:1960992/137‑1 (MQ=255)
                                                                                                 cgcgAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTg                                     >  1:5440039/1‑137 (MQ=255)
                                                                                                      aTGCGTCATTGAATTTGCCGACGCATTCGCGGGTAACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAACCCTGTCGACAAACGCCTGCAAGa                                >  1:9187787/1‑137 (MQ=255)
                                                                                                      aTGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTCGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGa                                >  1:18022509/1‑137 (MQ=255)
                                                                                                      aTGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGa                                >  1:11265525/1‑137 (MQ=255)
                                                                                                       tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  2:4762536/1‑137 (MQ=255)
                                                                                                       tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  2:16143207/1‑137 (MQ=255)
                                                                                                       tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  2:5014010/1‑137 (MQ=255)
                                                                                                       tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  2:6179073/1‑137 (MQ=255)
                                                                                                       tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCATGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  2:10878337/1‑137 (MQ=255)
                                                                                                        gCGTCGTTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                              <  2:5345061/137‑1 (MQ=255)
                                                                                                        gCGTCGTGGAGTTTGCCGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                              <  1:13554677/137‑1 (MQ=255)
                                                                                                        gCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                              <  1:812983/137‑1 (MQ=255)
                                                                                                           tCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGATTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGt                           >  2:14200692/1‑137 (MQ=255)
                                                                                                            cgtggAATTGGCCGACGAATTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc                          <  1:14802501/133‑1 (MQ=255)
                                                                                                            cATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTc                                                                                         >  1:7948063/1‑74 (MQ=255)
                                                                                                            cATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc                          >  1:985282/1‑137 (MQ=255)
                                                                                                              ttGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                        >  2:16765055/1‑137 (MQ=255)
                                                                                                              tggactttGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                        <  1:3372251/132‑1 (MQ=255)
                                                                                                               tGAATTTGCCGACGCGTTCGCGGGTAAACCCGCTCCTACACAGGGGCTTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg                       <  2:3930174/137‑1 (MQ=255)
                                                                                                                gAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGt                      >  1:3772072/1‑137 (MQ=255)
                                                                                                                gAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGt                      >  2:14039818/1‑137 (MQ=255)
                                                                                                                gAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGt                      <  1:18905843/137‑1 (MQ=255)
                                                                                                                 aaTTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTc                     >  2:9124711/1‑137 (MQ=255)
                                                                                                                    ttGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg                  <  2:9692148/137‑1 (MQ=255)
                                                                                                                      gCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTc                >  1:4929731/1‑137 (MQ=255)
                                                                                                                       ccGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCCTGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCa               >  1:10825733/1‑137 (MQ=255)
                                                                                                                         gccGCACTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCCGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  1:13783536/3‑137 (MQ=255)
                                                                                                                         gatgCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             <  2:2275797/134‑1 (MQ=255)
                                                                                                                         gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  1:14457022/1‑137 (MQ=255)
                                                                                                                         aaCGCATTCGAGGGCAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             <  1:7786604/136‑1 (MQ=255)
                                                                                                                          aCGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTg            <  2:10712356/137‑1 (MQ=255)
                                                                                                                              aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:9521433/1‑137 (MQ=255)
                                                                                                                              aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:17705537/1‑137 (MQ=255)
                                                                                                                              aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:17705501/1‑137 (MQ=255)
                                                                                                                                tCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTTTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTg      <  2:12865593/137‑1 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCg  >  1:18067045/1‑137 (MQ=255)
                                                                                                                                       |                                                                                                                                     
CGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCG  >  AE015451_phaM1/4675226‑4675493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑