Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM11,210,8390GA27.3% 1078.5 / 61.1 502intergenic (+29/+8)ytnA CDS (Uncharacterized amino acid permease YtnA)/PP_1060 CDS (putative Glutamate synthase_ large subunit)–/–
Reads supporting (aligned to +/- strand):  ref base G (96/266);  new base A (136/0);  total (236/266)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 511 total aligned reads displayed.

GTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGA  >  AE015451_phaM1/1210703‑1210975
                                                                                                                                         |                                                                                                                                        
gtgGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAg                                                                                                                                          <  1:3134350/137‑1 (MQ=255)
    cccTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGtt                                                                                                                                      <  1:2620564/137‑1 (MQ=255)
     ccTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTtc                                                                                                                                     <  2:14107574/137‑1 (MQ=255)
        gTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTtctct                                                                                                                                  <  2:4710093/137‑1 (MQ=255)
          aCATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCa                                                                                                                                <  2:10243370/137‑1 (MQ=255)
            aTCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGACGCCTTTTGGACCAAACGTTCTCTCAgg                                                                                                                              >  2:18674355/1‑137 (MQ=255)
               ggCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGgccg                                                                                                                           <  2:6225627/137‑1 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTGTGGCCCCAGCGTTCTCTCCGgccgcc                                                                                                                         >  2:15779055/1‑137 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGATTTTTGGCCCCCAATTTCTCTCCGgccccc                                                                                                                         >  1:6039600/1‑137 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGAGATTTTCTGCCCCCACATTCTCTCCGgccccc                                                                                                                         >  1:14042190/1‑137 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTTCGGCCCCAACGTTCTCTCCCgccgcc                                                                                                                         >  2:10920152/1‑137 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGTGGCCCCGACGTTTTCTCCGgccgct                                                                                                                         >  2:5294530/1‑136 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTCTGCGGCCCCAGCGTTTTCTAAAgccaca                                                                                                                         >  2:9796083/1‑134 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGACGCTTTTCGGCCCCAACATTCTCTCCGgccgcc                                                                                                                         >  1:12298019/1‑137 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGAAGCTTTTTTGTCCCCACGTTCTCTCAGgtcgcc                                                                                                                         >  1:5428820/1‑137 (MQ=255)
                 cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAATACAGCCTCCTGAACTGACGT‑GGGGCCGCGTTGCGGACCCAAGGGTGTCTCAAaccgcc                                                                                                                         >  2:18770958/1‑137 (MQ=255)
                 cccGACGTTCCTGGTGTTGCTGCCCGTGCTGTCTTACACGTTCCGCCTGGCGCCGAACGACGCACCAGGTGTGACGAGTACAGCATCCTGACCTGACGT‑GGGGGCGCTTTTCCGCCCCAACGTTTTCTCCggactcc                                                                                                                         >  2:12376867/1‑132 (MQ=255)
                   cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGAGCTTTTTTGTCCCAACGTTTTCTCCAGCCGCCAc                                                                                                                       >  1:15791287/1‑137 (MQ=255)
                    ggCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGAAGCTTTGTGGACCCAGCATTCTCTCAAACCGCCaac                                                                                                                      >  2:13294011/1‑135 (MQ=255)
                      cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTGTTGCCCCAGCATTTTCCCAAGCCGCCACCTc                                                                                                                    >  1:3682381/1‑137 (MQ=255)
                      cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCACTTTTTGGCCCCAGCGTTCTCTCCGGCCGCCACCTc                                                                                                                    >  1:9093772/1‑137 (MQ=255)
                      cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCACTTTGCGGCCCCAACGTTCTCCCAAACcaccacccc                                                                                                                    >  1:17100197/1‑134 (MQ=255)
                         tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                 <  1:9523636/137‑1 (MQ=255)
                         tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                 <  1:9233105/137‑1 (MQ=255)
                         tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                 <  1:10340634/137‑1 (MQ=255)
                         tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                 <  2:15273744/137‑1 (MQ=255)
                         tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                 <  2:17432542/137‑1 (MQ=255)
                         tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                 <  1:1596095/137‑1 (MQ=255)
                         tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGGACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                 <  2:9379242/137‑1 (MQ=255)
                                 ttGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCt                                                                                                         <  1:7771196/137‑1 (MQ=255)
                                      gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACCAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTTTTGCCCCCGCGTTTTCTTCTGCCGCCCCTTCGCTGTGTGGCTCGaaa                                                                                                    >  2:6790161/1‑137 (MQ=255)
                                      gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGACGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCAACCTCGATGTGCGGCTCGcaa                                                                                                    >  2:4544019/1‑137 (MQ=255)
                                      gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGAAAACTTTCGGCCCCAACCTTCTCCCAGGCCACCACCTCGCCGTGCGGCCCGaaa                                                                                                    >  2:17696184/1‑137 (MQ=255)
                                       aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTTCGGTCCCCACGTTTTCTCCGGGCGCCACCTTGTCGTGTGGATCGaaaa                                                                                                   >  2:11361436/1‑136 (MQ=255)
                                       aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTGCGGCCCCCGCGTTCTCTCCGGTCGCCACTTCGCTGTGCAGCTCGaaga                                                                                                   >  2:16570821/1‑135 (MQ=255)
                                       aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAAc                                                                                                   <  1:4827254/137‑1 (MQ=255)
                                       aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAAc                                                                                                   <  2:1922721/137‑1 (MQ=255)
                                       aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAAc                                                                                                   <  2:329001/137‑1 (MQ=255)
                                          gTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGACACTTTGTGGTACCCACATTCTTTCCAGACACCCCTTCTCTGTTCGGTTCGAAAATGt                                                                                                >  1:11583167/1‑137 (MQ=255)
                                          gTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGACACCTTTCGGACCCCACATTTTCTCCAACCGCCACCTCCCTTTTCGGATCGaaaacgt                                                                                                >  1:7360115/1‑133 (MQ=255)
                                            gCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCCTTTTGGCCCCCACCTTCTCTCCAGCCGCCACCTCGCCTTTTGGCTCGAAACCGttc                                                                                              >  2:4323364/1‑135 (MQ=255)
                                            gCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGAAGGCTTTCGGCCCCCACGTTCTCCCCAACCCCCCCCCCCCTCTGCTGCTCGAAACCGTcc                                                                                              >  1:6927345/1‑137 (MQ=255)
                                                 aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                         <  1:16900807/137‑1 (MQ=255)
                                                    acacGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGc                                                                                      <  1:18011725/137‑1 (MQ=255)
                                                        gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGt                                                                                  <  1:13847137/137‑1 (MQ=255)
                                                        gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGACGCTTTGCGGCCCCAGCGTTTTCTCCAGCCGCCACTTTGCTGTGCGGTTCGAAAATGTCCGCCCggggacgt                                                                                  >  2:16732158/1‑132 (MQ=255)
                                                             gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCAGCTTTTGGCCCCCACCTTTC‑CCCAAGCCTCCCCCTCTCTTTTCTGCTCGAAACTGTCCTCCCGGGCCACTTgtcc                                                                             >  1:4032392/1‑134 (MQ=255)
                                                             gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGTCGCTTTGCGGCCCCCGCTTTCTCTCCGTCCCCCCCTTCGCTGTGTGGCTCTAAACTGTCCGCCCGGGGCAGTTGCca                                                                             >  2:14697903/1‑137 (MQ=255)
                                                             gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTTCGGCCCCAGCGTTCTCTCCAGCCTCCACTTCGCTGTTCGGGTCGAAAATGTCCACCCGGGGCAGGTGTca                                                                             >  2:14516064/1‑137 (MQ=255)
                                                             gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGTCCCCGCGTTTTCTCCGGCCGCCACTTTGCTGTGCGGCTCGAAACCGTTTACCCAGGGCAGTTGccc                                                                             >  2:15903341/1‑136 (MQ=255)
                                                             gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCACTTTTCGGCCCCAACATTCTCTCCAGCCGCCACCTCTCTGTTTGGATCAAAAATGTCCCCCCAGGCCAGTTGCca                                                                             >  2:18083876/1‑137 (MQ=255)
                                                             gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGACGCTTTGCGGGCCCCGCGTTTTCTCCGGCCTCCACCTTGCTGTGCGGTTCTAAACCGTCCTCCCGGGACAGGTGGca                                                                             >  2:10789641/1‑137 (MQ=255)
                                                               cTGGCGTCGAAAGACGCACAATGTGTGACGAGTACAGCCTCCTGACCTGACGT‑TGGGCCGCTTTGCAGCCCCAGCGTTCTCTCAGCCCGCCACTTCGCTGTTCGTCTCAAAACTGTCCGCCCGTTCCAGTTGCcaca                                                                           <  2:13830250/137‑1 (MQ=255)
                                                               cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                           <  1:14965286/137‑1 (MQ=255)
                                                               cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                           <  1:5778722/137‑1 (MQ=255)
                                                               cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                           <  1:844253/137‑1 (MQ=255)
                                                               cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                           <  1:2937848/137‑1 (MQ=255)
                                                               cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                           <  1:18496580/137‑1 (MQ=255)
                                                                tGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGGTTTTTTGTCCCCCCCTTCTCTCCGGCCACCCCCTCCCTTTTCTTCTCCCAACCGTCCACCCCGGCCAGTTGCcacac                                                                          >  1:1023771/1‑136 (MQ=255)
                                                                 ggCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGATTTTTGGTCCCCGCATTTCCTCCAGTCTCCACCTCGCTGTGTGGGTCTAAAACGTCCCTCCGGGCAAAGTGCcacagc                                                                         >  1:17639078/1‑135 (MQ=255)
                                                                    gcCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCcgc                                                                      <  1:12522218/137‑1 (MQ=255)
                                                                     ccGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTTCGGCCCCAACATTCTCCCCCGCCACCACCCCCCTCTTCGGCCCAAAACCGTCCGCCCAGGCCAATTGCCACCTcccca                                                                     >  1:11939649/1‑134 (MQ=255)
                                                                          aGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAg                                                                <  2:14906173/137‑1 (MQ=255)
                                                                          aGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAg                                                                <  2:8281866/137‑1 (MQ=255)
                                                                          aGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAg                                                                <  2:16901056/137‑1 (MQ=255)
                                                                           gACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCTGCCCCAGCGTTCTCTCATGCCGCCACTTCGCTGTGCGGCGCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGa                                                               <  2:118279/137‑1 (MQ=255)
                                                                           gACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGa                                                               <  2:3702291/137‑1 (MQ=255)
                                                                           gACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGa                                                               <  1:2301763/137‑1 (MQ=255)
                                                                                       gtgACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCa                                                   <  1:4408580/137‑1 (MQ=255)
                                                                                          aCGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCt                                                <  2:10560164/137‑1 (MQ=255)
                                                                                          aCGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCCTTGCGGACCCCACTTTCTCTCCGGCCATCACCTCTCTGTGTTGGTCGAAACTGTCCGTCCCGGCCAGTTGTCACATCTGCGAACGGGAATGGTCGTTTACCt                                                >  2:13003728/1‑137 (MQ=255)
                                                                                           cGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCTTTTTGGCTCCCGCGTTTTCTCCGGCCTCCACTTTGCTGTGCGGCTCGAAACTGTCCTCCCCGGTCCGTTTCCACCCCCGCGAATAGGACTGGTCGTTCCCCTc                                               >  2:17871950/1‑137 (MQ=255)
                                                                                            gAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCGCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCg                                              <  1:14478167/137‑1 (MQ=255)
                                                                                             aGTACAGCCTCCTGACCTGACGT‑GGGGGCGATTTTCTGCCCCCGCCTTCCCTCCCGGCACCCCTTCGCCTTGTGGTTTTACACCGTCTTCCCCGGTCAGGTGTCCCACCCGCGAATAGAACCGGCCCTTTCCCTCGc                                             >  2:1608034/1‑137 (MQ=255)
                                                                                               tACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCg                                           <  2:7539006/137‑1 (MQ=255)
                                                                                               tACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCg                                           <  2:2896429/137‑1 (MQ=255)
                                                                                                aCAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCgg                                          <  1:15485436/137‑1 (MQ=255)
                                                                                                 cAGCCTCCTGACCTGACGT‑GGGGTCACTTTGTGGCCCCCACGTTTTCTCCGGCCGCCACCTCGCTGTGCGGCTCGAAAATGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACCGGCCTTTCACCTCGCCGGt                                         >  2:18888462/1‑137 (MQ=255)
                                                                                                 cAGCCTCCTGACCTGACGT‑GGGGCCGCTTTTCGGCCCCAACGTTCTCTCAGGCCACCACCCCGCTTTGCGGCTCGAAACTGTCCGCCCGGGCCAATTTCCCCACCCACGAACAGAACCAGCCGTTCACCTCTCCAGt                                         >  2:12559282/1‑137 (MQ=255)
                                                                                                  aGCCTCCTGACCTGACGT‑GGGGGCGCTTTTTGGTCCCCACATTTTCTCAGGCCACCACTTCTTTGTTCTGCTCGAAAATGTCCACCCGGGCCAATTGCCAACCCCCCTAATAAAACTGGCCTTTCACCCCCCCAGTc                                        >  2:7940926/1‑137 (MQ=255)
                                                                                                  aGCCTCCTGACCTGACGT‑GGGGACGCTTTTTGGCCCCCGCGTTCTCTCAAGCCGCCACTTCTCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAACAGAACTGGCCGTTCACCTCGCCGGTc                                        >  2:13561724/1‑137 (MQ=255)
                                                                                                         tgacctgacGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCt                                 <  2:8802440/137‑1 (MQ=255)
                                                                                                         tgacctgacGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCt                                 <  2:5837293/137‑1 (MQ=255)
                                                                                                              tgacGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCt                            <  2:7362996/137‑1 (MQ=255)
                                                                                                                   t‑GGGGGCGCTTTTTGGCCCCAACGTTCTCTCCGGCCGCCCCCTCGCTGTGTGGCTCTAAACCGTCCGCCCGGGCCAGTTGCCCCATCCACGAATAGAACTGGCCGTTCCCCTCGCCAGTCCGCAGCTCACCCGGAtt                       >  2:12051421/1‑137 (MQ=255)
                                                                                                                   t‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCtt                       <  2:3520864/137‑1 (MQ=255)
                                                                                                                     ggggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTc                      <  2:6581565/137‑1 (MQ=255)
                                                                                                                     ggggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTc                      <  2:17160183/137‑1 (MQ=255)
                                                                                                                         ccGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACCTCGCTGTGCGGCTTGAAACTGTCCGCCCGGGCCAGTTTCCACATCCGCGAACAGAACTGGACGTTCCCCTCTCCGGTCAGCAGCTCACCCGGCTTCAAGa                  >  1:16803928/1‑137 (MQ=255)
                                                                                                                          cGCTTTTCTGCCCCCACGTTCTCTCCAACCACCACTTCGCTGTGCGGCTCGAAACCGTCCGCCCGGGCCAGTTGCCACACCCGCGAACAGAACGTGCCGTTTCCCTCGCCGGTCAACAGCCCACCCGGATTCAAGaa                 >  2:8112263/1‑137 (MQ=255)
                                                                                                                           gCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAac                <  2:18326624/137‑1 (MQ=255)
                                                                                                                             tttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAacac              <  2:5648424/137‑1 (MQ=255)
                                                                                                                             tttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAacac              <  2:8482512/137‑1 (MQ=255)
                                                                                                                               tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt            <  1:13564095/137‑1 (MQ=255)
                                                                                                                                gCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATg           <  1:13268629/137‑1 (MQ=255)
                                                                                                                                   gCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCAt        <  1:10806305/137‑1 (MQ=255)
                                                                                                                                       cAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGc    <  2:11648635/137‑1 (MQ=255)
                                                                                                                                       cAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGc    >  2:15446027/1‑137 (MQ=255)
                                                                                                                                       cAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGc    <  1:7587526/137‑1 (MQ=255)
                                                                                                                                         gCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCga  <  2:2636100/137‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
GTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGA  >  AE015451_phaM1/1210703‑1210975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑