| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 CDS (Monooxygenase_ DszC family) ← / ← sctC CDS (sulfur compound ABC transporter ‑ ATP‑binding subunit) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 278,742 | 1 | . | A | 94.8% | 2281.1 / 113.5 | 710 | intergenic (‑237/+77) | PP_0224 CDS (Monooxygenase_ DszC family)/sctC CDS (sulfur compound ABC transporter ‑ ATP‑binding subunit) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (3/33); new base A (370/280); total (397/313) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.20e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 844 total aligned reads displayed.
GCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCT > AE015451_phaM1/278606‑278873 | tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGNGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aa < 1:17949604/137‑1 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aa < 2:15683639/137‑1 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aa < 1:6811184/137‑1 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aa < 2:337051/137‑1 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aa < 1:11896581/137‑1 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aa < 2:12617097/137‑1 (MQ=255) atctcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 1:16034407/133‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGTTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 1:16567129/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 2:4825306/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 2:4659834/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 1:7506976/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 2:13314923/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 1:8513921/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 2:11625153/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 1:1270599/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaac < 2:14060750/137‑3 (MQ=255) cgcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaaccc < 2:16033850/137‑5 (MQ=255) gcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaacccg < 1:9595267/137‑6 (MQ=255) gcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaacccg > 1:12201649/1‑132 (MQ=255) gcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aaaccca > 1:503676/1‑132 (MQ=255) gcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑AA‑acccg > 1:10774578/1‑135 (MQ=255) cgACAGCCGTGTGCTGGTCCGGTGGTCCAATATATATACCCTAATGATCTATAAAATTTTTATGAACTAACTTTTCGGAACATCTATAAAAGGGGGATTTGTTACAGAGGTGCAGGGCTCTTC‑GC‑GGGT‑aaaaccgc > 1:13139962/1‑131 (MQ=255) gACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCt < 2:1958172/137‑1 (MQ=255) aCAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTc < 2:10286066/137‑1 (MQ=255) gACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTCGGAATATTTATAGAAGGGGGATTTGTTACCGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTa > 2:6716206/1‑137 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTac < 2:6527635/137‑1 (MQ=255) cGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTaca < 1:15168204/137‑1 (MQ=255) gtgtGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTacac < 1:3294506/137‑1 (MQ=255) tggtccggtggtccggTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGc < 2:14153962/137‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCt < 2:6108554/137‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCt < 2:10650240/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCaa < 2:6385268/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCaa < 1:3682348/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCCCCACACATGCCTCaa > 1:17708681/1‑137 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATGTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTTaa < 2:3470487/137‑1 (MQ=255) cggtggtccggtAGATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGGATATTTATAGAATGGGGATTTGTTACAGATGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCaa < 1:6610501/137‑1 (MQ=39) tggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGAt < 1:228172/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTGTAAAATTCTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGATGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:16873497/137‑1 (MQ=39) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:5486564/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:7082271/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:4000387/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:15385873/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:371978/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:6912031/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:14204773/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:8476748/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:13497830/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:9834576/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt > 1:11174047/1‑137 (MQ=255) tccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCtg < 2:11911442/137‑1 (MQ=255) ccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAATTTTTGGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCtgt < 2:5476957/137‑1 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑ACCGCTCCTAAACACATGTCTCAAGATTTGTGTACTGTAGGAg > 1:9973030/1‑137 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCg < 2:15353701/137‑1 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTacac > 1:17022656/1‑103 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTCCACACATGCCTCAAGATTTGTGTCCTGTAGGAGCggg > 1:2581186/1‑137 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCaa < 1:8252967/114‑1 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGGTCTGTGCACTGTAGGAGCggg > 2:12381418/1‑137 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCggg > 2:17997520/1‑137 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑aa > 2:4096512/1‑89 (MQ=255) aTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTCAA‑CCCACTCCCCCACACACGCCTCAAAACTTTTGCACTGTAGGAGCGGGt > 1:17588687/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGACTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGttt > 2:7909138/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTGAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGgtt > 1:10020201/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTCCACACACTCCTCCAAATCTGTGCACTGTCGGAGAGGGttt > 1:15639466/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATTTGTGCACTGTAGGAGCGGGttt > 1:10423730/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:8828585/116‑1 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGttt > 1:4491430/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGttt > 1:2905582/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGttt > 2:2846215/1‑137 (MQ=255) tttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATTTGTGCACTGTAGGAGCGGGtttcc > 2:17715223/1‑135 (MQ=255) tttATAAAATTTTTATGAACTAACTTCTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTCAA‑CCCGCTCCTCCCCCCATGCCTCAAAATCTGTGCACTGTAGGAGCGGGtttgc > 1:7336731/1‑135 (MQ=255) aaaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCACGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 2:18292516/1‑137 (MQ=255) tttttGTGGACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTATAGAGGTGCTGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTGCACGTGTGCATCAGGATCTGTGCATTGTAGGAGTGGGTTTACCCGCGAAAg < 2:14531376/137‑1 (MQ=255) tATGAACTAACTTTTTGGAGTATTTATAGAAGGGGGATTTTTTACAGAGGTGCTGGGCCCTTT‑GT‑GGGTAAA‑CCCGCTCCTACACACATGCCCCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGcc < 2:11317598/137‑1 (MQ=255) tGAACTAACTTTTTGGAATATTTCTAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCAATGTAGGAGCGGGTTTACCCGCGAAAGGGCCgg > 2:9699419/1‑137 (MQ=255) taactTTTTGAAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGGG‑GGGA‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCATTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAg < 2:12906641/137‑1 (MQ=38) aaTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa > 2:2243622/1‑137 (MQ=255) atTTATAGAGGGGGAATTTGTTACAGCTTCGCCGGGCTCTTC‑GC‑GGGA‑AACCCCACTCCCAAACAAATACCCCAAGATCTGTGCACTGTAGGAGAGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGc < 1:1965930/137‑1 (MQ=25) tttATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGcc < 2:10883884/137‑1 (MQ=255) tttAGAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GCGGGGA‑AA‑CCCGCCCCTACACACATGCCTCAAGATCTGTGCATTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGcc < 1:13773512/137‑1 (MQ=38) ggATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTGGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAgg < 1:1591513/137‑1 (MQ=255) ggATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTAATCGGAGGCCGCAGTCCCAAgg > 2:17194576/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACCCACATGCCTCAAGATTTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGa > 1:18470677/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATTTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGa > 1:8842014/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTCCCCGCGAAAGGGCCGGAACAGGTTTCCTCGGAGGCCGCAGTCCCGAGGa > 2:8509344/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑ACCGCTCCTACCCACCTGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGGGGa > 2:1505815/1‑137 (MQ=38) tGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACtt > 2:13612021/1‑137 (MQ=255) gTTACAGGGGTGCTGGGCTTTTC‑GCGGGGA‑AA‑CCTGCTCCTACACACATGCCTCAAGATCTGTGCACTGGAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTg < 2:7308422/137‑1 (MQ=38) ctgggCTCTTT‑GT‑GGGTAAA‑CCCGCTCCTACACACGTGCCTCAAGCTTTTTGCATTGGGGGAGTGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGc < 1:6145089/135‑1 (MQ=255) ccGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGTCTCAAGATCTGTGCACTGTAGGAGCGGGTTTCCCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGc > 2:2470180/1‑137 (MQ=255) ccGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCCAGATTTGTGCACTGTAGGAGCGGGTTTCCCCGTGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAAATTGCGCAAGAACTGc > 2:9245860/1‑137 (MQ=255) ccGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGc > 2:5908748/1‑137 (MQ=255) ccGGGCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGc > 2:14700426/1‑137 (MQ=255) gggCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTCCACACATGCCTCAAGATCTGTGCACTGTAGGGGCGGGTTTCCCCGCGAAAGGGCCGGAACAAGTTTCCTCGGAGGCCGCAATCCCAAGGAACTTGTGCAAAAACTGcca > 1:9267885/1‑136 (MQ=255) ggCTTTTC‑GCGGGGA‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc < 1:14081225/137‑1 (MQ=39) ggCTCTTC‑GC‑GGGTCAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGGGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc > 2:1672316/1‑137 (MQ=255) ggCTCTTC‑GC‑GGGTCAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAACGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc > 1:11374473/1‑137 (MQ=255) ggCTCTTC‑GC‑GGGTAAA‑CCCGCTCCTACACACAGGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACTCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc < 1:14686282/137‑1 (MQ=255) ctTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTAc < 2:8244050/137‑1 (MQ=255) ctTC‑GC‑GGGTAAA‑CCCGCTCCTACACACATGCCTCAAGACCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAAAACTGCCGCGTAc < 2:8043411/137‑1 (MQ=255) ttC‑GC‑GGGTAAA‑CCCGCTCCTCCACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACg > 2:517538/1‑137 (MQ=255) | GCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTC‑GC‑GGGT‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCT > AE015451_phaM1/278606‑278873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |