Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM14,675,3360TG29.9% 317.0 / 22.2 243intergenic (+35/+69)PP_4137 CDS (putative Outer membrane siderophore receptor)/chrR CDS (Chromate reductase)–/–
Reads supporting (aligned to +/- strand):  ref base T (49/120);  new base G (0/72);  total (51/192)
Fisher's exact test for biased strand distribution p-value = 3.19e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 258 total aligned reads displayed.

ACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCG  >  AE015451_phaM1/4675200‑4675472
                                                                                                                                        |                                                                                                                                        
 ccGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTCCCACGAACGTGTCAttt                                                                                                                                         >  1:14333809/1‑136 (MQ=255)
 ccGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTGCCCCCCAACGCGTCAttt                                                                                                                                         >  2:838850/1‑136 (MQ=255)
     gACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAAtt                                                                                                                                     <  2:17831203/137‑1 (MQ=255)
     gACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAAtt                                                                                                                                     <  2:6833932/137‑1 (MQ=255)
      aCGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGTGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAAttt                                                                                                                                    <  1:13001269/137‑1 (MQ=255)
      aCGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAAttt                                                                                                                                    <  2:12475132/137‑1 (MQ=255)
      aCGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAAttt                                                                                                                                    <  1:13001222/137‑1 (MQ=255)
        gCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGc                                                                                                                                  <  2:19041393/137‑1 (MQ=255)
         ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGcc                                                                                                                                 <  1:6191776/137‑1 (MQ=255)
               tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGTGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCa                                                                                                                           <  2:894314/137‑1 (MQ=255)
               tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCa                                                                                                                           <  2:10357184/137‑1 (MQ=255)
               tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCa                                                                                                                           <  1:18308860/137‑1 (MQ=255)
               tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCa                                                                                                                           <  1:7997055/137‑1 (MQ=255)
                aCAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCAt                                                                                                                          <  2:17238209/137‑1 (MQ=255)
                          cgaccAGGACAATGCCTGTTCAACACCGGGCGAAGGATTTGGTGTGTATGCCGGGTCTCCCTACAACTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTTCCGACGCATTCACGGGTaa                                                                                                                <  2:14854466/134‑1 (MQ=37)
                          cGGCCGGAACAATCCCTGTTCGACACCGGGCAAAGGATTGGGCGGGCATTCTGGGGTTTCCTACATCTTCCGCTGACGGGTGGTCGCGGGTTTACCCGCGAATCCTTCGTTGAATTTGCCGACGCATTCGCGGGCaa                                                                                                                <  2:3151216/137‑1 (MQ=25)
                          cGGCCAGGACAATGCCTGTTCGACACTGGGCGAAGGATTTGTCTTGTATGTCGGGTTTTCCTACGCCTTCCGTTGACGGGTGGGCGCGGGTTTCCCCGCGAGTGCGTCGTTGAGTTTGCCGACGCATTCGCGGGGaa                                                                                                                <  2:18103446/137‑1 (MQ=255)
                          cGGCCAGGACAATGCCCGTTCAACACCGGGCAAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTCCCCCAAACACGTCATTTACCTTGCCTACACACCCTCGGGTaa                                                                                                                >  2:18855358/1‑137 (MQ=255)
                          cGGCCAGGACAAGTCCCTTTCGACACCGGGCGAAGGGTTTGTCGTGTATCCTGGGGTTTCCTACAGCTTCCGCTGATGGGTGGGCGTGGGTTTACCCGCGAATGCGTCATTGAATTGACCGACGCGTTCGCGGGGaa                                                                                                                <  2:1666860/137‑1 (MQ=255)
                          cGGCCAGGAAAGTGCCCGTTCGACACCGGGCGAAGGATTTGGCGGGTATGCCGGGGTTTCTTACAGCTTCCTTTGACGGGTGGGCGCGGTTTTACCCGCGAATTCGTCGTGGAGTTTCCCGACGCATTCGTGGGTaa                                                                                                                <  2:1633548/137‑1 (MQ=255)
                           ggCCAGGACAATGCCCTTTCGACACCGGGCGAAGGGTTGGGCGTGTATGCTGGGGTTTCCGACATCTTCCGCTGATGGGTGGGCGCGGGTTTACCCGCGAGTGCGTCATTGAGTTTGCCGATGCATTCGCGGGGaaa                                                                                                               <  2:16972006/137‑1 (MQ=255)
                            accAGGCCAGTGCTCTTTCAACACCGGGCGAAGGATTTGGCGTGTATCCTGGGGTTTCCCACAGCTCCCACTGACGGTTGGGCGCGGTTTTACCCGCGAATGCGTCGTTGAGTTTCCCGAAACGTTCGCGGGGAAAc                                                                                                              <  2:2416601/136‑1 (MQ=255)
                               agaaCAATGCCCGTTCGACCCCGTGATAAGGATTTGGCGTGGAGTCTGGGGTTTCCTACGGCTTCCGTTGACGGTTGGGCGTGGGTTTACCCACGAAGGCGTCATGGAATTTGCCGACGCATTCGCGGGTAAACCCg                                                                                                           <  2:12990453/134‑1 (MQ=25)
                               aGGACAATTCCTGTTCGACACCGGGAGAAGGATTTGGCGTGGAGGCGGGGGTTTCCTACATCTTCCGTGGATGGGGGGGCGGGGGTTTACCCGCGAATGCGTCGTGGAGTTTGCCGACACGTTCGCGGGGAAACCCg                                                                                                           <  2:8261362/137‑1 (MQ=255)
                                    aaTACCCGCTCAACACCGGGCAAAGGATTTGGCGTGTATGCCGGGTTTTCCTACATCTTCCGCTGACGGGTGGGCGGGGGTTTACCCGCGAATGCGTCATTGAATTTTCCGACGCATTCGCGGGGAAACCCGCTCCt                                                                                                      <  2:228114/137‑1 (MQ=37)
                                       tcccGTTCGACACTGGGCGAAGGATTTGGCGTTTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACACATTCGCGGGTAAACCCGCTCCTaca                                                                                                   <  2:13745544/136‑1 (MQ=255)
                                       gCCTGTTCGACACCGGGCGAGGGGTTTGGTGTGTATGCGGGGGTTTCCTACAGCTTCCGCGGACGGGGGGGCGCGGGTTTACCCGCGAATTCTTCGTTGAGTTTTCCGACGCATTCGCGGGGAAACCCGCTCCTaca                                                                                                   <  2:6050592/137‑1 (MQ=255)
                                       ccccGTCCGACACCGGTCGAAGGGTTTGTCTTGTATGCCGGGGTTTCTTACATCTTCCGCGGATGTGTGTGCGCGGGTTTACCCGCAAATGCGTCATGGAATTTGCCGACGCATTCGTGGGTAAACCCGCTCCTaca                                                                                                   <  2:9462169/136‑1 (MQ=25)
                                         ccGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTCCCGCGAACGCGTCCCTTCACTTGCCGACACCCTCTCGAGTAAAACCCCCCCtcccca                                                                                                 >  2:3460571/1‑132 (MQ=255)
                                         ccGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTCCCCGCGAACGCGTCATTGAAGTTGCCGACGAATTCGCGGGTAAACCCACTCCTCcaca                                                                                                 >  2:2929003/1‑137 (MQ=255)
                                         ccGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGGTCCCCGCAAACACGGCACTGAACTTTCCGAAGCACTCACAGGGAAAACCACCCCCacacc                                                                                                 >  2:5859564/1‑136 (MQ=255)
                                          cGTTCGACACTGGGCAAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAg                                                                                                <  2:11511323/137‑1 (MQ=255)
                                            ttCGACACCGGGAGAAGGATTGGGCGTGTATACCGGGGTTTCCTACAGTTTCCGTTGAGGGGGGGGCGTGGGTTTACCCGCGAGTGCGTCGTTGAGTTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAggg                                                                                              <  1:13178606/137‑1 (MQ=25)
                                              cGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGCCGGGTGGGCGCGGGTTTCCCCCCTAACGCGTCCCTGAAGTTGTCGAACCAATCTCGGGTAAACACACTCCTccaccgagga                                                                                            >  2:13317780/1‑131 (MQ=255)
                                               gACACCGGGAGAAGGATTTGGAGTGTGTGCCGGGGTTTCTTACAGCTTCCGTGGATGGGTGGGCGCGGGTTTACCCGCGAATTTGTCATTGAGTTTTCCGACGCGTTCGCGGGGAACCCCGCTCCTACACAGGGGCg                                                                                           <  2:526613/137‑1 (MQ=255)
                                                 cacCGGGCGAAGGATTTGGCGTGTGTGCCGGGGTTTCCTACATCTTCCGCTGACGGGTGGGCGTGGGTTTACCCGCGAATGCGTCGTTGAGTTTGCCGACACATTCGTGGGTAAACCCGCTCCTACACAGGGGCGtt                                                                                         <  2:1750017/137‑1 (MQ=38)
                                                 cacCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCGGACGGGTGGGCGCGGGTCTACCCGTGAATGCGTCATTGAGTTTGCCGACGCATTTGCGGGTAAACCCGCTCCTACACAGGGGCGtt                                                                                         <  2:18247979/137‑1 (MQ=255)
                                                   ccGGGAGAAGGATTTGTCGTGGGGGCCGGGGTTTCCGACAGCTTCCGCTGACGGGTGGGCACGGGTTTACCCGCAAATGCTTCATGGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGc                                                                                       <  2:8602332/137‑1 (MQ=37)
                                                    tgggCGAAGGGTTTGGCGTGTATGCCGGGGTTTCCGACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATGGAATTGGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGca                                                                                      <  1:19052368/136‑1 (MQ=38)
                                                    cGGGCGCAGGATTTGGCGTTTATTCTTGTTTTTCCTCCGTCTTCCGCGGATGGTTGGGCGCGGGTTTCCCCGTGAAGGCGTCGTGGACTTTTCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCCTTGca                                                                                      <  2:6941936/137‑1 (MQ=255)
                                                     gggCGAGGGATTTGGCGTGTATCCCGGGGTTCCCTACATCTTCCTCTGACGGGTGGGCGTGGGTTTACCCGCGAGTGCGTCGTGGAGTTTGCCGATGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                     <  2:5947070/137‑1 (MQ=255)
                                                     gggCGAAGGGTTTGGCGTGGATGCTGGGGTTTCCTACATCTTCCTCGGAAGGGTGGGCGTGGTTTGACCCGCGAATGCGTCATGGACTTTGCCGACACATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                     <  1:8243961/137‑1 (MQ=255)
                                                     gggCGAAGGATTGGGAGTGTATGCCGGGGTTTCCTACAGCTTCTGCGGACGGGTGGGGGTGGGTGTACCCGCGAGTGCTTCATGGAGTTTGCCGACGCATTCGTGGGTAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                     <  1:15490695/137‑1 (MQ=255)
                                                     gggAGAAGGGTTTGGCGGGTATGCCGGGGTTCCCTACAGCTTCCGCGGACGGGTGGGAGGGGGTTGACCCGAGAAGGCGTAAGGGAATTTGCCGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                     <  1:12386936/137‑1 (MQ=255)
                                                     gggAGAAGGATTTGTCGTGTGGTACGGGGTTTCCGCCATCTTCCGCTGATGGTTGGGCGAGGTTTGACCCAAAAATGCGTCATGGACTTTGCCAACCCGTTCGAGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                     <  1:8775088/137‑1 (MQ=255)
                                                     ggacGAAGGGTTTGCCGTGTATGCTGGGTTTTCCTACATCTCCCTCTGATGGGTGGGCGCGGTTTCACCCGCGAAGGCGTAGTGGAATTTTCCGACAAGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                     <  1:5172438/134‑1 (MQ=255)
                                                            gggtttGGCGTGTGTGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATACGTCATTGAATTTGCCGACGCGTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                              <  2:3391519/134‑1 (MQ=255)
                                                            gggtttGGCGTGTATGCCGGGGTTTCCTACATTTTCCGTGGAGGGGGGGGCGCGGGTTGACCAGAGAGGGCGTAGTGGAGTTTGCCGAAGCATTAGTGGGAAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                              <  1:16098545/134‑1 (MQ=255)
                                                            ggATTTGGCGTGTATGCTGGGGTTTCCTACAGCTTCCGCGGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                              <  2:17636073/137‑1 (MQ=255)
                                                                  ggCGTGTGTGCCGGGGTTTCCTAAAGCTTCCGCGGCTGGGTGGGCACGGGTTTACCCGCGAGTGTGTCATGGAGTTTGCCGCCGTGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAggg                                                                        <  2:1512978/137‑1 (MQ=255)
                                                                    cGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTCCCCCCAAACGCTTCACCAAACTCTCCCACACACTCCCAAGTAAACCCACCCCCCCCCAAGGGAGTTGTACAACAGGAGTAggggg                                                                      >  2:1558764/1‑136 (MQ=255)
                                                                         aTGCCGGGTTTTCCTACAGCTTCCGCTGATGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAGTTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGa                                                                 <  2:11985019/137‑1 (MQ=255)
                                                                          tGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTCCCTCAAACGCGTCCCTTGATTTTCCCCCGCCCTCTCTGGTCAACCCCCTCCCCCCCAAGGGAGTTTTACAGTCGGATTCGGGGtttcaga                                                                >  2:18723695/1‑132 (MQ=255)
                                                                           gctggggTTTCTTACAGTTTCTGTGGATGGGGGGGCGGGGGTTTACCAGTGAGTGCGTCGTGGAGTTTGCCGANGCGTTCGCGGGGAACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                               <  1:17999321/134‑1 (MQ=255)
                                                                           gCCGGGGTTCCCTACACCTTCCATTGACGGGTGGGCGCGGGTTTACCCGCGAGTGCGTCATGGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                               <  2:7279949/137‑1 (MQ=38)
                                                                           cccGGGTTTCCCTATAGCTTCCGTTGACGTGTGGGCGTGGGTTTACTAGTGAATGCTTCATTGACTTTGCCGACGCATTCTCGGTTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                               <  2:11490445/136‑1 (MQ=255)
                                                                                ggTTTCCTAAGGTTTCTGTTGATGGGTGGGAGTGGGTTGACCAGCAAATTCTTAGTGGAGTTTTCCGACGCGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCt                                                          <  1:894514/137‑1 (MQ=255)
                                                                                      cTACAGCTTCCGCTGATGGGGGGGCGTGGGTTTACCCGCGAATGCGTCATGGAATTTTCCGACGCATTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCaa                                                    <  1:13741126/137‑1 (MQ=255)
                                                                                           gCTTCCGCTGATGGGTGGGCGCGGGTTTACCAGAGAGTGCGTCGTGGAGTTTGCCGACGCGTTTGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCa                                               <  1:746978/137‑1 (MQ=255)
                                                                                            tttCCGTTGATGGGTGGGCGGGGGTTTACCCGAGAGTGTTTCGTGGAGTTTGCCAACGCGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                              <  1:6844164/136‑1 (MQ=255)
                                                                                            cTTCTGCTGATGGGGGGGCGTGGGTTTACCCGCAAGTGCGTCATTGAATTTACCAACGCATTCACGGGCAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                              <  1:16867134/137‑1 (MQ=255)
                                                                                            cTTCCTCTGATGGGTTGGCGCGGGTTTACCCGCGGCTGCGTCGTTGGCTTTTCCGGCGCATTTGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                              <  2:14384569/137‑1 (MQ=37)
                                                                                            cTTCCTCTGATGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAATTGGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                              <  1:17286227/137‑1 (MQ=38)
                                                                                            cTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGTGTCGTGGAATTTGCCGACGCATTCGAGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                              <  1:16618199/137‑1 (MQ=38)
                                                                                            cTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAGTTTGCCAACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                              <  2:11054139/137‑1 (MQ=255)
                                                                                                   tGATGGGTGGGAGCGGGTTGACCCGAGAGTGTTTCATTGGATTTGCCGACGCATTCGCGGGCAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                       <  1:1777488/137‑1 (MQ=255)
                                                                                                   tGACGGGTGGGCGGGGGTTGACCGGTGAGTGCGTCGTTGAATTTGCTGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                       <  2:4922602/137‑1 (MQ=255)
                                                                                                   tGACGGGGGGGCGAGGGTTTACCTGCGAGTGCTTCGTTGAATTTGCCGACGTGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                       <  1:3733603/137‑1 (MQ=255)
                                                                                                      cGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCGTTCGCGGGTAAACCCGCTCCTACATAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCa                                    <  2:4534100/137‑1 (MQ=255)
                                                                                                      cGGGTGGGCGCGGGTTTACCCGAGAATGCTTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCa                                    <  1:6619024/137‑1 (MQ=255)
                                                                                                        cgcattcgcgGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAAGCaaa                                  >  2:7482395/7‑137 (MQ=255)
                                                                                                         gccttcgcgGGTTCACCCACGAATGCGTCATCGAACCCGCCGACGCATCCACGAGTACACCCGCTCCCACACCGGGGCGTTGCACAGCAAGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCAGGACGCaaaa                                 >  2:11673716/6‑136 (MQ=255)
                                                                                                            ggcacgGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCCCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCCGACCGCCCTGTTCACCTTCCCCCATGACGCAAACCTg                              >  1:13929709/5‑137 (MQ=38)
                                                                                                             tcgcgGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAAGAAAACCTGt                             >  2:14143788/2‑137 (MQ=255)
                                                                                                              cgcgGGTTTACCCGCGAATGCGTAATGGAGTTGGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                            <  2:17374717/137‑1 (MQ=39)
                                                                                                                  ggTTTACCAGCGGATGAGTAATGGAGTGGGCGGACGAAGTAGTGGGCAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGAGTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACa                        <  1:2406171/137‑1 (MQ=255)
                                                                                                                   ttttACCAGCGAGTGCGTCATGGAATTTGCCGACGCGTTCGTGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACaa                       <  1:12847815/136‑1 (MQ=255)
                                                                                                                          cgcgAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTg                >  1:1852180/1‑137 (MQ=255)
                                                                                                                          cgcgAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAAATTCACCCATGACGCAAACCTGTCGACAAACGCCTg                >  2:10047484/1‑137 (MQ=255)
                                                                                                                             gagttcgtcgtTGAGTTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCaa             <  1:11099776/132‑1 (MQ=255)
                                                                                                                               aTGCGTCATTTAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTCCACAGGGGCGTTGCACAGCAAGATTAGGGGTTCAGACCGCCCTGTTCACCTTCACCCATGACGCAAACCTGTCGACAACCGCCTGCAAGa           >  2:16431061/1‑137 (MQ=255)
                                                                                                                                tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa          >  1:10256439/1‑137 (MQ=255)
                                                                                                                                tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa          >  2:11141088/1‑137 (MQ=255)
                                                                                                                                tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa          >  1:3534147/1‑137 (MQ=255)
                                                                                                                                tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa          >  1:7739859/1‑137 (MQ=255)
                                                                                                                                tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa          >  1:14616502/1‑137 (MQ=255)
                                                                                                                                tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa          >  1:1920979/1‑137 (MQ=255)
                                                                                                                                 gcgcCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc         <  2:19372066/137‑1 (MQ=255)
                                                                                                                                 gCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc         <  1:15947799/137‑1 (MQ=255)
                                                                                                                                 gCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc         <  1:13778568/137‑1 (MQ=255)
                                                                                                                                 gCGTCATTGAATTTGCCAACGAATTCGCGGGTACACCCGCTCCTACACAGGGACGTTGCACCGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGAAAACCTATCGACAAACGCCTGCAAGAAc         >  2:2748957/1‑137 (MQ=255)
                                                                                                                                 gCGTCATGGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc         <  2:4401918/137‑1 (MQ=255)
                                                                                                                                     cATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc     >  1:2989991/1‑137 (MQ=255)
                                                                                                                                      aTTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg    >  1:17054312/1‑137 (MQ=255)
                                                                                                                                      aTTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg    >  1:3984098/1‑137 (MQ=255)
                                                                                                                                       ttGAGTTTGCCGACACGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc   <  1:4521920/137‑1 (MQ=255)
                                                                                                                                       ttGACTTTGCCGGCTCATTTGCGGGTAAACCCGCCCCTACACAGGGGCGTGGCACAGCAGGATTAGGGGTTCAGACCGCCCTATTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc   <  2:762762/137‑1 (MQ=255)
                                                                                                                                       ttGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc   <  2:1563720/137‑1 (MQ=255)
                                                                                                                                        tGAATTTTCCGACGCGTTCGTGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg  <  1:9675294/137‑1 (MQ=255)
                                                                                                                                        tGAATTTTCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg  <  1:4347840/137‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
ACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCG  >  AE015451_phaM1/4675200‑4675472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑