Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM11,210,8490AC29.3% 1148.2 / 89.9 585*540G (TGA→GGA) PP_1060 CDS (putative Glutamate synthase_ large subunit)
Reads supporting (aligned to +/- strand):  ref base A (95/317);  new base C (171/0);  total (267/318)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 607 total aligned reads displayed.

ACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTG  >  AE015451_phaM1/1210713‑1210985
                                                                                                                                        |                                                                                                                                        
  aTCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAgg                                                                                                                                        <  1:7092328/137‑1 (MQ=255)
       cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGTCTTGCGGCCCCAGCGTTTTCTCAGgccgcc                                                                                                                                   >  1:11907194/1‑137 (MQ=255)
       cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGCTTTTTGGCCCCAACGTTCTCTCCGgccgcc                                                                                                                                   >  2:16905641/1‑137 (MQ=255)
       cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGgccgcc                                                                                                                                   <  1:14353539/137‑1 (MQ=255)
       cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGATTTGCGGCCCCAGCGTTCTCTCAGgccgcc                                                                                                                                   >  2:16136096/1‑137 (MQ=255)
       cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGAAGATTTGTGGGCCCAACATTCTCTCCGgccacc                                                                                                                                   >  1:10063836/1‑137 (MQ=255)
        ccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTGTGGCCCCCGCGTTTTCTCCGgccaaca                                                                                                                                  >  2:10048178/1‑133 (MQ=255)
         cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGACTTTCGGCCCCCACATTCTCTCCGGCCGCCAc                                                                                                                                 >  2:11319142/1‑137 (MQ=255)
         cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGACCCAGCGCTCTCTCAAgccgcccc                                                                                                                                 >  2:13613179/1‑135 (MQ=255)
         cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCACTTTTCTGGCCCCGCGTTTTCTCCGGCCCCCAc                                                                                                                                 >  2:12140636/1‑137 (MQ=255)
         cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCACTTTTCGGCCCCAACGTTCTCTCAAGCCGCCAc                                                                                                                                 >  2:3165045/1‑137 (MQ=255)
         cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCCTTTTTGCCCCCACTTTCTCTCAGGCCCCCAc                                                                                                                                 >  1:18283685/1‑137 (MQ=255)
          ggCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTGTGGTCCCAACGTTCTCTCAGGCCGacacc                                                                                                                                >  2:14396810/1‑136 (MQ=255)
          ggCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTTCGGCCCCCACACTCTCTCCAGCcaccacc                                                                                                                                >  2:6312118/1‑136 (MQ=255)
          ggCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGAAGCTTTTTGGCCCCAACGTTCTCTCCGGCcaccacc                                                                                                                                >  1:13236430/1‑136 (MQ=255)
            cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGTTTTTTTGCCCCCACGTTCTCTCCGgccaccccctt                                                                                                                              >  1:12280491/1‑132 (MQ=255)
            cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTGGTCCCAGCGTTTTCTCCGGCCGCCACCTc                                                                                                                              >  1:17063761/1‑137 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGTTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGTCGCTTTGCGGCCCCAGCGGTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  1:15301739/137‑1 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  2:1395506/137‑1 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  2:17522477/137‑1 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  2:1936159/137‑1 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  2:26074/137‑1 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  2:12257939/137‑1 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  2:5170985/137‑1 (MQ=255)
               tCCTGGTGTTGCTGACAGTGCTGTAGGACACGTTCCGCCTGGCGACGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTTACCTCACTTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTcacg                                                                                                                           <  2:2952433/137‑4 (MQ=255)
               tCCTGGTGTTGCTAACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                                           <  2:7626442/137‑1 (MQ=255)
                   ggTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGc                                                                                                                       <  1:9024374/137‑1 (MQ=255)
                       ttGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCt                                                                                                                   <  2:14970963/137‑1 (MQ=255)
                            gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGCGTACAGCCTCCTGACCTGACGTGGGGCCACTTTGCGGCCCCAGCGTTCTCTCAAGCCGCCAATTTGCTGTGTGGTTTGaaa                                                                                                              >  2:4191749/1‑137 (MQ=255)
                             aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAAc                                                                                                             <  2:14166151/137‑1 (MQ=255)
                                       aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAACTTTTCGGCCCCAACGTTCTCCCCGGCCACCCCCTCGCTGTGTGGCTCGAAACTGTCCGccca                                                                                                   >  2:7508418/1‑136 (MQ=255)
                                       aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCNCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                                   <  1:17997856/137‑1 (MQ=255)
                                       aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                                   <  1:9475812/137‑1 (MQ=255)
                                       aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                                   <  2:14575145/137‑1 (MQ=255)
                                       aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                                   <  1:7519550/137‑1 (MQ=255)
                                          acacGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTTCGGCCCCCACGTTCTCTCCGGCCGCCACTTCGCTGTGTGGCTCGAAACTATCCGCCCGGGc                                                                                                >  1:17306370/1‑137 (MQ=255)
                                              gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCACTTTTCGGCCCCCACGTTCTCTCCCGCCGCCACCTCTCTTTTTGGTTCTAAACTTTCCTCCCCGGCCaat                                                                                            >  2:7120888/1‑135 (MQ=255)
                                              gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACACTTTTCTGCCCCAACGTTCTCTCCGGCCGCCACCTCCCTTTTTTGCTCTAAACTTTCCTCCCCGGCCAGt                                                                                            >  2:9298768/1‑137 (MQ=255)
                                                tCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTGTGGACCCAACGTTCTCTCCGGCCACCCCCTCTTTTTGTGGTTCGAAAATGTTCTCCCGGGCCCGTTg                                                                                          >  2:15442002/1‑137 (MQ=255)
                                                tCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTg                                                                                          <  2:10906300/137‑1 (MQ=255)
                                                  cGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCAGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGcc                                                                                        <  2:5700148/137‑1 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTTGCCCCCGCGTTTTCTCCGGCCGCCCCCTCTCTTTGTGGCTCCCAAACGTCCCCCCCGGTCAATTGccc                                                                                       >  2:8131142/1‑136 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTCGGTCCCCACATTCTCTCCAGCCGCCCCCTCTCTTTGTGGCTCGCAAACATCCGCCCGGGACAATTGCca                                                                                       >  2:18445197/1‑137 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAACTTTTTGGCCCCAACATTCTCCCCAGCCACCACCTCGCTGTGCGGCTCGAAAACGTCCGACCAGGACCGGTGCca                                                                                       >  1:10464446/1‑137 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCCCTTTTTTGCCCCAACGTTCTCTCATGCCACCACCTCCCTCTTTGGCTCCAAACCTTCCCCCCCGGCCAGTTgtcc                                                                                       >  2:5915201/1‑134 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCACTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCca                                                                                       >  1:13585597/1‑137 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACTCTTTTTGGTCCCCACGTTCTCTCCAGCCCCCCCCTCTCTTTTCGGCTCCAAACCTTCCTCCCCCGCCCGTCGccc                                                                                       >  1:15029541/1‑136 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTTTGGTCCCAGTGTTTTCTTCGGCCTTCCCTTCTTTGTGTTGTTTTAAATTGTTTGTCCGGGCCAGTTgtcc                                                                                       >  2:18885841/1‑134 (MQ=255)
                                                   gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGAAGCTTTTTTGTCCCCACATTCTCCCCCGCCCCCCCCTCCCTGTGCTGTTCGAAACCTTCCTCCCAGGCCAGTTGccc                                                                                       >  1:6453685/1‑136 (MQ=255)
                                                     cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTNTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                                     <  1:18799107/137‑1 (MQ=255)
                                                     cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                                     <  1:2377011/137‑1 (MQ=255)
                                                     cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                                     <  2:15895849/137‑1 (MQ=255)
                                                     cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCACTTTTTGGGCCCCACATTCCCTCCAGCCGACACCTCGCTGTTTGGCTCGAAACTGTCCGCACGGGCCAATTGCcaca                                                                                     >  2:5508248/1‑137 (MQ=255)
                                                     cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTTCGGACCCCACTCTCTCTCCGGCCCCCCCCTCCCTGTGCGGATCGAAACCGTCCCCCCCGGCCCGTTTCcaca                                                                                     >  2:2222499/1‑137 (MQ=255)
                                                         cgcCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCACTTTGCGGCCCCCACATTCTCTCCGGCCACCCCCTCGCTTTGCGGATCAAAAACGTCCGCCCGGGCCAATTGCCACAcccc                                                                                 >  2:12594965/1‑136 (MQ=255)
                                                         cgcCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCcg                                                                                 <  2:16366528/137‑1 (MQ=255)
                                                                aGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCNGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAg                                                                          <  1:15766146/137‑1 (MQ=255)
                                                                        aaGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGcc                                                                  <  1:12652494/137‑1 (MQ=255)
                                                                        aaGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGcc                                                                  <  2:18215928/137‑1 (MQ=255)
                                                                             gtgACGAGTACAGCCTCCTGACCTGACGTGGGGGCACCTTTTGGCCCCCACGTTCTCCCCAGCCACCCCCTCCCCTTGCAGCTCCAAACCGTCCGCCCCGGCCAATTGCCCCACCCACAAACAAAACCGGCCGTTcc                                                             >  2:3905500/1‑136 (MQ=255)
                                                                             gtgACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTTTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCa                                                             <  1:4089390/137‑1 (MQ=255)
                                                                             gtgACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCa                                                             <  1:10726457/137‑1 (MQ=255)
                                                                             gtgACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCa                                                             <  1:2548093/137‑1 (MQ=255)
                                                                               gACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCAcc                                                           <  2:8784783/137‑1 (MQ=255)
                                                                               gACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCAcc                                                           <  1:5623846/137‑1 (MQ=255)
                                                                                 cGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTCTGTCCCAACGTTTTCTTCGGGCCCCACCCCCCTTTTCTGCTTTCAAATGTTCGCCCCGGCCAATTTCCACACCCTCGAACAGAACTCGTCGTTTAcccc                                                         >  2:8295262/1‑135 (MQ=255)
                                                                                    gTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCgtc                                                      <  2:3555288/137‑3 (MQ=255)
                                                                                       cAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGt                                                   <  2:11471077/137‑1 (MQ=255)
                                                                                       cAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGt                                                   <  1:3234737/137‑1 (MQ=255)
                                                                                        aGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGTCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGGTCGAAACTGTACGCCCGGGCCAGGTGCCACATCCGCGAATAGAACTGGCCGTTCACCCCGCCgggc                                                  >  2:4823895/1‑135 (MQ=255)
                                                                                          cctcctGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTcag                                                <  1:14843699/137‑1 (MQ=255)
                                                                                               tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCTCCCCTTCTCTTTGCTGCTCGAACCTCTCCTCCTTTGCTGGTGGTTACATCCTCGAAGAGGACCTCCTTTGCACCTCGCCGGTCAGCAGCt                                           <  2:12972602/137‑1 (MQ=255)
                                                                                               tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCt                                           <  1:3712082/137‑1 (MQ=255)
                                                                                               tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCt                                           <  2:7961/137‑1 (MQ=255)
                                                                                                gacctgacGTGGGGACGCTTTGCTGCCCCAACGTTCTCTCCCGCCGCCACCTCGCTGTGCGGCTCTAAACTGTCCGCCCGGGCCCGTTGCCCCATCCACGAACAGAACTGGCCGTTCCCCCCGCCGGTCAGCAGTTc                                          >  2:13275875/1‑137 (MQ=255)
                                                                                                    tgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTTGCCGTTCACCTCGCCGGTCAGCAGCTCACCt                                      <  2:10305181/137‑1 (MQ=255)
                                                                                                     gacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTg                                     <  2:18692099/137‑1 (MQ=255)
                                                                                                       cGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGc                                   <  1:8381456/137‑1 (MQ=255)
                                                                                                       cGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGc                                   <  2:3324063/137‑1 (MQ=255)
                                                                                                         tGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCtt                                 <  2:17855419/137‑1 (MQ=255)
                                                                                                           gggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCa                               <  1:16158477/137‑1 (MQ=255)
                                                                                                            ggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa                              <  2:10731709/137‑1 (MQ=255)
                                                                                                              ccGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGa                            <  2:4650999/137‑1 (MQ=255)
                                                                                                              ccGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGa                            >  2:8531430/1‑137 (MQ=255)
                                                                                                                    tGCGGTCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt                      <  1:4802826/137‑1 (MQ=255)
                                                                                                                    tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt                      <  1:19174580/137‑1 (MQ=255)
                                                                                                                    tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt                      <  1:624016/137‑1 (MQ=255)
                                                                                                                    tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt                      <  2:15759188/137‑1 (MQ=255)
                                                                                                                    tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt                      <  2:166453/137‑1 (MQ=255)
                                                                                                                    tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt                      <  1:3030798/137‑1 (MQ=255)
                                                                                                                    tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAACAGCTCACCTGGCTTCAAGAACACAt                      <  2:19046467/137‑1 (MQ=255)
                                                                                                                      cGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGc                    <  2:17336741/137‑1 (MQ=255)
                                                                                                                            cAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGc              <  2:17753668/137‑1 (MQ=255)
                                                                                                                              gCGTTCTCTCATGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCga            <  2:9697756/137‑1 (MQ=255)
                                                                                                                              gCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCga            <  2:6596912/137‑1 (MQ=255)
                                                                                                                                 ttCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGaa         <  2:2404773/137‑1 (MQ=255)
                                                                                                                                      tcAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCt    >  1:4441593/1‑137 (MQ=255)
                                                                                                                                      tcAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCt    >  1:11633181/1‑137 (MQ=255)
                                                                                                                                      tcAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCt    >  2:15184157/1‑137 (MQ=255)
                                                                                                                                      tcAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCt    >  1:1940932/1‑137 (MQ=255)
                                                                                                                                        |                                                                                                                                        
ACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTG  >  AE015451_phaM1/1210713‑1210985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑