| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 704,348 | Δ1 bp | 100% | intergenic (+170/‑14) | EO946_RS03650 → / → EO946_RS03655 | CamS family sex pheromone protein/phosphotransferase enzyme family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 704,348 | 0 | A | . | 99.5% | 994.7 / ‑2.3 | 200 | intergenic (+170/‑14) | EO946_RS03650/EO946_RS03655 | CamS family sex pheromone protein/phosphotransferase enzyme family protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base . (74/125); total (75/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 233 total aligned reads displayed.
GCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAGAAAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGAAT > NZ_CP034943/704209‑704485 | gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaaga < 2:2625840/140‑1 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaaga < 2:1116559/140‑1 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaaga > 1:578775/1‑140 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaaga > 1:4367556/1‑140 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaaga > 2:4601219/1‑140 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaaga > 2:4650788/1‑140 (MQ=255) cacaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaa < 1:106294/140‑1 (MQ=255) cacaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaa < 1:567538/140‑1 (MQ=255) cacaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaa < 1:4133050/140‑1 (MQ=255) cacaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaa < 1:2787333/140‑1 (MQ=255) cacaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaa < 1:1771288/140‑1 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:4404281/140‑2 (MQ=255) gggTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAg > 2:774798/1‑140 (MQ=255) tttttATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGa < 2:4367556/140‑1 (MQ=255) tttttATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGa < 1:1616305/140‑1 (MQ=255) ttttATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGAc < 2:10432/140‑1 (MQ=255) tGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 2:3989712/125‑2 (MQ=255) tGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag > 1:2770704/1‑124 (MQ=255) tGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag > 1:3989712/1‑124 (MQ=255) tGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCa > 1:1872076/1‑140 (MQ=255) gTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCAt > 2:2450452/1‑140 (MQ=255) gTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCAt > 2:1917544/1‑140 (MQ=255) gTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCAt > 2:3544582/1‑140 (MQ=255) gTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAACAGCAAAG‑AAGGGAGTTAGACGTGCAt > 2:197230/1‑140 (MQ=255) ggAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGCACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCaaaa > 1:4899562/1‑140 (MQ=255) ggAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACatat > 2:3085833/1‑140 (MQ=255) tATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCATTATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGAt < 1:4268364/140‑1 (MQ=255) tGCTTCTGCCGAGACACAAATCAGGGCGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGtt < 1:314532/140‑1 (MQ=255) tCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTgg > 1:2464380/1‑140 (MQ=255) tCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTgg > 1:2951401/1‑140 (MQ=255) tCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTgg > 1:3911243/1‑140 (MQ=255) tGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCa > 2:4590980/1‑140 (MQ=255) acacAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTg < 1:2678847/140‑1 (MQ=255) acacAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAAGAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTg < 2:215345/140‑1 (MQ=255) acaATTCAGGGTGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGAAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 2:619173/140‑1 (MQ=255) acaAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 1:3693735/140‑1 (MQ=255) acaAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 1:2056457/140‑1 (MQ=255) acaAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 1:1370168/140‑1 (MQ=255) acaAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 1:3085833/140‑1 (MQ=255) acaAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAAGAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 1:2239651/140‑1 (MQ=255) aaTCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGAAGTGAATAAATAAATCAAAAACATATTTCATGAAGATCAGGTTTTGTCAGAGGCTGCGATg > 2:2676829/1‑140 (MQ=255) cAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGaaa < 1:4499224/140‑1 (MQ=255) cAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGaaa < 1:2972458/140‑1 (MQ=255) gAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGt > 1:111550/1‑140 (MQ=255) ggTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGttt > 2:531191/1‑140 (MQ=255) ggTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGttt < 2:633425/140‑1 (MQ=255) ttGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATACCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCaaa < 1:1589787/140‑1 (MQ=255) aTGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAg > 2:3617351/1‑140 (MQ=255) aTGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAg > 2:1747316/1‑140 (MQ=255) aTGCTGGAACGCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑ACGGGAGTTAGACGTGCATAACGAAATCAAAAACATAGTTCATGACGAGCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAg > 2:1223443/1‑140 (MQ=255) cTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCa > 2:3370834/1‑140 (MQ=255) cTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCa > 1:1684074/1‑140 (MQ=255) gtgtGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGttt > 2:2273412/1‑140 (MQ=255) gtgtGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGttt > 2:4913660/1‑140 (MQ=255) tgtgAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAACACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGtttt < 2:4405374/140‑1 (MQ=255) tgtgAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGtttt > 2:1525208/1‑140 (MQ=255) gtgAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTc > 1:3623729/1‑140 (MQ=255) aCAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTg < 1:3211434/140‑1 (MQ=255) aCAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTg < 1:2368513/140‑1 (MQ=255) aatcaatATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGAt < 2:225566/140‑1 (MQ=255) aatcaatATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGATTTGCCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGAt > 2:3903861/1‑140 (MQ=255) atatCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGa < 2:313314/140‑1 (MQ=255) atatCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGa < 2:2794127/140‑1 (MQ=255) tatCAAATCAATATCAAAG‑TAGTGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGATTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 1:4713112/140‑1 (MQ=255) tatCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 2:3310618/140‑1 (MQ=255) tatCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 1:1993042/140‑1 (MQ=255) tatCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 2:4859839/140‑1 (MQ=255) tatCAAATCAATACCAAAG‑AAGGGAGTTAGACGTGAATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 2:1198063/140‑1 (MQ=255) tcaaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTTGCTGATGCGGaaaa < 2:4112796/140‑1 (MQ=255) tcaaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaaaa < 1:1525208/140‑1 (MQ=255) tcaaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaaaa < 1:1884256/140‑1 (MQ=255) tcaaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaaaa < 1:4639065/140‑1 (MQ=255) acaaatcacTAGCACAG‑AAGGGAGTTAGCCGTGCATAAAGAAATCAAAAACAGATTGCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaaaa < 2:1699145/139‑1 (MQ=255) caaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCTTTTTCTGGCTGATGCGGAAAAc > 2:1922189/1‑140 (MQ=255) aaatcaaTAGCACAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATATCATCAATATCAGGTTTTGGCAGAGGCTGAGATGAAATAAGTTTTATCAAACAGCCAGGTGCGTTTTCTGGCTGATGAGGTAAACt > 2:1637635/1‑140 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAACAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 2:2851675/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGATGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt > 2:1811207/1‑140 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAGATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 2:1873362/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 2:2030982/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 2:475428/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 2:4255212/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 2:3866994/140‑1 (MQ=255) aaataaatAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTTGCTGATGCGGAAAACt < 1:3411405/140‑1 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt > 1:1205437/1‑140 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt < 2:1005914/140‑1 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt > 1:610032/1‑140 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt < 2:760117/140‑1 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt > 1:197618/1‑140 (MQ=255) aaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGta < 1:4601219/140‑1 (MQ=255) aTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGtat > 2:4433464/1‑140 (MQ=255) aTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGtat > 1:1561078/1‑140 (MQ=255) aGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGACAACTATGTatat > 2:2364239/1‑140 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATGATGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 2:881417/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCTGAAAACTATGTATATGa < 1:1020857/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 1:329153/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 2:3440461/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 2:1512211/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 1:3981732/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 1:863100/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAAAATATTTCATGAAGATCAGGTTTTGGGAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 2:4088351/140‑1 (MQ=255) | GCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAGAAAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGAAT > NZ_CP034943/704209‑704485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |