| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 755,531 | A→C | 11.6% | Q22H (CAA→CAC) | EO946_RS03880 → | rhamnogalacturonan acetylesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 755,531 | 0 | A | C | 11.6% | 600.0 / 9.6 | 268 | Q22H (CAA→CAC) | EO946_RS03880 | rhamnogalacturonan acetylesterase |
| Reads supporting (aligned to +/- strand): ref base A (162/56); new base C (4/42); total (167/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.26e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 268 total aligned reads displayed.
ACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTG > NZ_CP034943/755393‑755661 | tcttgTTTTTTCTAGGGAAGAGCTGTCCATTATTTATGCCATATGAAACGAA‑AAAAACGAGGTGTAATTAGAAATGGCAAATAACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAg < 2:2611286/136‑1 (MQ=255)aCCTGTTTTTTCAAGTTAAGTGCTGTCTATGATTGTTGCCATATGAAACTAA‑AAAAACGAGGTGGAATGAGAATTGGCAAATCACATTTTTCTTGCTGTCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAg < 2:1849276/140‑1 (MQ=255) ttttttCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAgggggg > 1:201107/1‑140 (MQ=255) ttttCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAACTGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACTTATTGAGACAGCACAAATCAAGGGGGGTg > 1:3768988/1‑140 (MQ=255) catgtgtagagCTGTCAATGATTGTTTAAATATTAAACTAA‑AAAAACGAGGGTGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTTTGGAGACAGCACAAATCAAGGGGGGTggggg < 2:3717485/133‑1 (MQ=255) ttacATGATTGATGACATATTAAACGAA‑AAAAACGAGGGGGAATGATAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCt < 2:8660/137‑1 (MQ=255) gTCCATGATTGATGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCCAATCACATTTATCTTGCTGGCGATTCAACTGTTCAACCGTCTGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCt < 2:1360930/140‑1 (MQ=255) tCCATGATTGATGCCATATGAAACGAA‑AAAAACGTGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:209535/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:3227909/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGAGTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:4545682/1‑140 (MQ=255) tCCATGATTGATCCCAGATGAAACGAA‑TAAATCGAGGGGGAATGAGAAATGGCAACTCACAGTGATCTTGCTGGCGATTCAACTGTTCAAACCTATGGAGACAGCACACATCAAGGGGGGGGTGGGCAGTGTCTCGGCTc > 2:2174231/1‑140 (MQ=255) ttatttatGCAATATTAAACGAA‑AAAAACGAGGGTGAATGAGAAATCTCAAATAACATTTATCTTGCTGGCGATTCAACAGTTCAAACGTATGGAGACAGCACAAATCACGGGGGGTGGGCGCAGTTTCTCGGCTCGCAt < 2:606281/138‑1 (MQ=255) ctattgatGCCATATGAACCGAC‑AAAAACGAGGGGGATTGAGAAATTGCTCATCACATTTTTCTTGCTGGCGATTAAACTGTTCAAACGTCTGGAGAGAGCACACATCAAGGGGGGTGGGGGCAGTGTCTCGGCTCGCAt < 2:4631346/138‑1 (MQ=255) gattgatGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCAta > 1:1760330/1‑139 (MQ=255) gattgatGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:2434029/1‑140 (MQ=255) gattgatGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:3722040/1‑140 (MQ=255) ttattccATATTAAACGAA‑AAAAACGCTGTGGAATGAGAATTGGAAAATCAGATTTATCTTGATGGCGATTCAAGTCTTCAAACGTATTGAGACTGCACAACTCAAGGGGGGTCGGGGCAGTTTCTCGGCTCGCATCTGc < 2:3150176/135‑1 (MQ=255) ttattcaatatGAAACGAA‑AAAAAAGATTGTGAATGAGAAATGGCAAATCAGATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc < 2:2534268/133‑1 (MQ=255) ttatGCCTTATGAAACGAC‑AAAAACGATGGGGAATGATAAATTTCACATCACTTTTATCTTTCTGGCGATTCAACTGTTCAAACCTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc < 2:4535603/138‑1 (MQ=255) ttatGACATATGAAACGAA‑AAAAACGAGGTGGAATTAGAAATGGCAAATCACATTTTTCTTGCTGGCGATTCCACTGTTCAAACGTAGGGAGACAGCACCACTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc < 2:1763232/138‑1 (MQ=255) tgatgaCATATTAAACGAA‑AACACCGTGGGTTAATGAGAACTGCCAAATCACATTTATCGTGCTGGCGATTCAACTGTTCAAACGTAGGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc < 2:3513984/140‑1 (MQ=255) attccttatTAAACTAA‑AAAAAAGAGTGGTAATGACAAATGGCAAATCACATTTTTCTTGCTGGCTATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg < 2:3574313/134‑1 (MQ=255) atGCCATATGAAACGAACAAAAACGATGGGGACTGAGAAATGGCAAATCACAGTTATCTTGCTGGCGAATCAACTGTTCAAACGTATTGAGACAGAACAAATCAAGGGGGGTGGGGGCAGGTTCTCGGGTCGCAGCTGcc > 1:3619356/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGCGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:3671000/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGTGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACTTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4753899/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCACACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCCGTTTCTCGGCTCGCATCTGCCg > 1:4095283/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCCGTTTCTCGGCTCGCATCTGCCg > 2:3987463/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:1017304/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:693299/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:906575/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1379920/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2907430/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2947204/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:322443/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1812986/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATCGAGACAGCACAAATCAAGGGGGGTGGGGGCCGTTTCTCGGCTCGCATCTGCCg > 2:193053/1‑140 (MQ=255) atGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGGTCAAACGTATGGAGACAGCACAAATCATGGGGGGTGGGTGCAGTTTCTCGGCTCGCATCTGCCg > 2:2312949/1‑140 (MQ=255) gacATATTAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGTATATTCAACTGTTCAAACTTATGGATACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:1337238/138‑1 (MQ=255) gCCATATGAAACGAA‑AAAAACGCTGGGTAATGAGAACTGGCAAATCACCTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:1303237/140‑1 (MQ=255) gCCATATGAAACGAA‑AAAAACGAGGGGGAATGACAAATGGCAACTCACATTTATCTTGCTGGCGATACAACGGTTCAACCGTATGCAGACAGCACAAATCAAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 1:1258110/140‑1 (MQ=255) cacATATTAAACGAA‑AAAAAATACGGGTAATCATAAATGTCAAATCACATTTATCTTGCTGGCTATGCACCTGTTCAAACTTATGGATACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:2637511/138‑1 (MQ=255) cATATTAAACGAA‑AAAAACGATGGTTAATGAGAAATGTCAAATCACATTTTTCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGc < 2:3777434/140‑1 (MQ=255) cATATGAAACGAA‑AAACACGAGGGGGAATGAGAAAGTGCAAATCACTTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATTGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGc < 2:800385/140‑1 (MQ=255) tatGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCGCGGCTCGCATCTGCCGGAGCat > 1:3032450/1‑140 (MQ=255) atGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCata > 2:1756041/1‑140 (MQ=255) acaCGCA‑AAAAACGAGGGGGAATGAGAAATCGCAAATCACATTTATCTTGCTGGCGATACAACTGTTCAACCGTCTGGAGACAGCACAAATCACGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:4069959/138‑1 (MQ=255) aaaaGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACACATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:3086277/140‑1 (MQ=255) aaaCTAA‑ATATATGAGGGGGTATTAGAAATGGCAAATCAGTTTTTTCTTGCTGGCGATTAATCTGTTCAAACGGATTGAGACAGCACAAATCATGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:1660922/140‑1 (MQ=255) aaaCGAA‑AAAAACGAGGGGGAAGGAGAACTGGCAAATCACATTTATCTGGCTGGCGATTCAACTGGTCAACCGTATGGAGACAGCACAAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:3505784/140‑1 (MQ=255) aaCGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCa > 2:3813107/1‑140 (MQ=255) actaa‑aaaaaCGAGTGGGAATTATAAATGTCAAATCAAATTTTTCTTGTTTGAGATTCAACTGTTCAAACGAATGGATACAGCACAAATCACGGCGCGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 2:1055061/137‑1 (MQ=255) accaa‑aaaaaCGAGGGGGAATGACCAATGCCAAATCACATTTATCTTGCGGCCGATACAACTGACCAAACCTAGGGACACAGCACAAACCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 1:2176327/137‑1 (MQ=255) aCGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 2:4949436/140‑1 (MQ=255) aa‑aaaaaaGAGGGGGAATGAGATATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTg < 2:1285002/140‑1 (MQ=255) aa‑aaaaaCTAGGGGGAATTAGAAATGGCATATCTAATTTATCTTGCTGGCGATTCAACTGTTCAACCTTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTg < 2:4288800/140‑1 (MQ=255) a‑aaaaaCGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGa > 1:2484079/1‑140 (MQ=255) aaCGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTaa < 2:449350/140‑1 (MQ=255) tGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaaga > 1:4912111/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGAAATCGGGGgaataa > 2:4359319/1‑140 (MQ=255) cAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGc > 2:4614236/1‑140 (MQ=255) aaTCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTc > 2:3371624/1‑140 (MQ=255) cacaTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGaa > 2:2787061/1‑140 (MQ=255) cTGTCGATTCAACTTTTCACACGTATGGAGACAGCTCAAATCAAGGGGTGTGGGGGCAGTTTCTCGGCTCGCATATGCCTGATCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa < 2:3010790/140‑1 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGTGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 2:2777953/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 1:976734/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 2:4086947/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAA‑GGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGTCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAag > 1:3239770/1‑140 (MQ=255) gATTCAACTGTTCACACGGCTGGAGACAGCACACATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAggg < 1:445299/140‑1 (MQ=255) ttCAAATGTTCAAACGTATCGCGCCACCACAACTCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCa < 2:4023594/140‑1 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCTGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:2668739/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:1907997/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:507982/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGACTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGTGAAGAAGCTCGAAATCATTTGTGGAAGAGGGCAGGCTTCAg > 2:2337921/1‑140 (MQ=255) cccaCGTCTGGCGACCCCACAAATCCCGCGCGCTGGCGGCCGTGTCTCGGATCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc < 1:763909/137‑1 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGACGAGGGCAGGCTTCAGGc > 1:2061448/1‑140 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc > 1:3009463/1‑140 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc > 1:606902/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:4315024/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:1075162/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:4165193/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCACTCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:4295543/1‑140 (MQ=255) aggAGACAGCACAAATCAACGGGGCTCGGGGCAGTTTCACGGCTCACATCTGCCGGAGCATATTCAAGTGATTAACAGATCAATCGGGCGAAGAAGCACCAAAACAGTTGTGGAAGAGCGCAGGCATCAGGCGATTCtat > 2:2681695/2‑138 (MQ=255) gagaCAGCACAAATCATGGCGGGTGGGGGCAGTTTCTCGGCTCGCATGTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGAt < 2:404738/140‑1 (MQ=255) aCAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGAtgtg > 2:4679353/1‑140 (MQ=255) accacacaTCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCTTCTGCCGGAGCTTATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt < 2:2294337/138‑1 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGACGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:3487195/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:2310261/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:1444088/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:1468793/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:738600/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:557618/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTGTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGACAACCTTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:2560257/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGATCATATTCAAGTCATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTTATTg > 2:518078/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 1:1307675/58‑1 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAtgg > 2:4539247/1‑138 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:1513034/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:482752/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:4743278/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:3353030/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTAGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:4359816/1‑140 (MQ=255) | ACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAA‑AAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTG > NZ_CP034943/755393‑755661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |