| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,111,632 | T→G | 8.4% | L576R (CTT→CGT) | addB → | helicase‑exonuclease AddAB subunit AddB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,111,632 | 0 | T | G | 8.4% | 545.6 / 5.4 | 227 | L576R (CTT→CGT) | addB | helicase‑exonuclease AddAB subunit AddB |
| Reads supporting (aligned to +/- strand): ref base T (64/133); new base G (28/2); total (92/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.23e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
AATCATTGAAGCGCAGCAGCATCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGG > NZ_CP034943/1111495‑1111771 | aTTGAAGCGCAGCAGCATCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAtt < 2:2418715/140‑1 (MQ=255) ttGAAGCGCAGCAGCATCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCtttaaatt > 1:4661456/1‑134 (MQ=255) ttGAAGCGCAGCAGCATCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTCAttt > 1:835096/1‑140 (MQ=255) agcagcaTCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAAtt < 2:817716/140‑1 (MQ=255) agcagcaTCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGACGCGGAGTCGCTTACATTTTCTCTAAtt < 2:1297091/140‑1 (MQ=255) gcaTCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGc < 2:3800714/140‑1 (MQ=255) tCAGCAGGCGTGGGATGCAGTCATTCAGCTAGTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGccgg > 2:4576013/1‑138 (MQ=255) tCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTGTGTTGAAATGATGGGGGATGATGAGATTGCTCTTGAGTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTACCTTTTCTGTAATTCCCCCT‑g > 2:3833312/1‑140 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑gcgc < 2:215934/140‑1 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTCCTTTTGTGTAATTACGCCG‑gcgc > 1:1725259/1‑140 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTAATTTTGTGTAATTACGCCG‑gcgc > 2:1899044/1‑140 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAAGGATGGAAGCCGGCGCGGAGTCGCGTTAATGTTCTCTACTTACGccgtggg > 1:4899885/1‑135 (MQ=255) gcagGCATGGGATGCAGTCAGTCAGCTACTTGAGCAGTTTGTTGAAATGATGGGGGATGATGAGAGTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑gcgc < 1:4201650/140‑1 (MQ=255) cGTGGGATGCAGTGATTCAGCTACTTGAGGAGTTTGTGGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAc < 1:3271633/140‑1 (MQ=255) cGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTCTCTAATTACGCCG‑GCGCGTGAc > 2:117589/1‑140 (MQ=255) cGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAc < 1:2108143/140‑1 (MQ=255) cGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATCGAATTAAGCCG‑GCGCttttc > 1:2475053/1‑137 (MQ=255) cGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATATAATTCAGCCG‑GCGCTTTAc > 2:2696182/1‑140 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTAATTTTATATAAATACGCCT‑GCGCTTGaac > 2:1588116/1‑138 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAcc < 1:2286019/140‑1 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAcc < 1:4359987/140‑1 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAcc < 1:74319/140‑1 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTATGTAATTACGCAG‑GCGCGTGTcc > 2:2986503/1‑140 (MQ=255) ggATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAgg < 2:431652/140‑1 (MQ=255) gATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTGTCTAATTACGCCA‑GCGCTTTACCacgg > 2:1349435/1‑137 (MQ=255) cAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTTTGTAAATAACCCC‑GCGGGTGACCAGGTGttt > 1:1437823/1‑140 (MQ=255) cAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTGAACTTTTGTCTTATTACGCCTGGCGC‑TGGGCAGGTGttt > 1:2980329/1‑140 (MQ=255) cAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTAATTTTGTCGAATTAAGCCA‑GCGCGTGAACCGGTGttt > 1:2347294/1‑140 (MQ=255) gTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGt < 1:2826041/140‑1 (MQ=255) gTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGt < 2:3297354/140‑1 (MQ=255) gTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTCATTTTTTATAATTACGCCG‑GCGCTTGACCAGGTGttttt > 1:1310738/1‑138 (MQ=255) tCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTTTACAATTAAGCCT‑GCCCTTAGACAGgtgatatta > 2:4042209/1‑134 (MQ=255) ttCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTGATTTTCTGTAATTACGCCA‑GCGCGTGAACAGGTGtttttgggg > 1:1047494/1‑134 (MQ=255) ttCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTtct > 2:845367/1‑104 (MQ=255) ttCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTACGCCG‑GGGCTTGAGCAGGTGGTTGTCGGc > 2:1223788/1‑140 (MQ=255) ttCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTCTCTAAATACGCCG‑GCGCTTGACCAGGTGTTTGTAGGc > 2:2050958/1‑140 (MQ=255) gCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAata < 1:4893872/140‑1 (MQ=255) aCTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTTTATAATTACGCCT‑GGGCTTTTCCACGTGTTTTTGGGCAATATgg > 1:3589604/1‑140 (MQ=255) cTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATATAAATACGCCA‑TCGCGTTACCCCGTGTTTGTGGGCAataaaga > 2:263538/1‑136 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACCATTTATCATATTGCGCCG‑GGGCTTGACCATGTGTTTTTCGGCCatattggt > 2:2024312/1‑136 (MQ=255) ttGAGGAGTTTGTTGAAATGATCGGGGATGATGAGATTTCTCTTGATTTGTTTCATCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:4980373/140‑1 (MQ=255) gagTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATc < 1:2545045/140‑1 (MQ=255) gagTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATc < 1:3537580/140‑1 (MQ=255) gTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCa < 1:4388103/140‑1 (MQ=255) gTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCa < 2:3606347/140‑1 (MQ=255) tttGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTATATAAATACCCCG‑GCGCGTTACCCCGTGTGTGTCGGCAAAAATGATTTATGCAg > 2:1850624/1‑140 (MQ=255) ttgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTATAAATACGCCA‑GCGCTTTACCACGTGTTTTTCGGCAAAATTGATTTAtaccga > 2:3414371/1‑135 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTAATTTTTTCTAATTGCGCCT‑GCGCGTTTCCAGGTGGTTTTGGGGACTATTGATTTATTCaaaa > 1:4038608/1‑140 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTATGTAATTACGCCA‑GAGCTTTACCAGGTGTTTTTCGGCAAAATTTATTTATACaaaa > 2:2960941/1‑140 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATCTAATTCAGCCC‑GCCCGTTACCACGGGTTTGTGGGCAATATGTATTTATCCACaa > 2:4274450/1‑140 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAAATTTATAAAAATACCCCA‑GCCCTTGACAACGTGTTTTTCGGCAATATTGATTTaaacacaa > 2:3178096/1‑133 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTAAATTTGTCTAATTACGCCA‑GCGCGTGACCACGTGTTTTTGGGCAATATTGATTTATACACaa > 1:4873037/1‑140 (MQ=255) gttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAAt < 2:222694/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:858541/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 2:508391/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:1651419/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCG‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:385928/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAAGTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:641962/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAGTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 2:2901182/140‑1 (MQ=255) tgatgGGGGATGATGAGAGTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:2701764/140‑1 (MQ=255) gatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 1:534487/140‑1 (MQ=255) gatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 1:1899044/140‑1 (MQ=255) gatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 1:3627336/140‑1 (MQ=255) gggggATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAAATTTGTATAAATGCGCCT‑TCGCTTGAACAGGTGTTTGTGGGGAATATTGATTTATACAGAATGTACGGCAAct > 2:1816198/1‑140 (MQ=255) gatgatGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATCTGGATTTATCCAGAATGTACGGCACCTCTTg < 2:4123834/140‑1 (MQ=255) gatgatGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTg < 2:1626113/140‑1 (MQ=255) gatgatGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTg < 1:322496/140‑1 (MQ=255) tgttgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCa < 2:3984318/137‑1 (MQ=255) tgatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACTGCACCTCTTGCa < 2:1041919/140‑1 (MQ=255) gatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCGTGACCAGGTGTTTGTGGGCAATATGGATTTATACAGAATTTAAGGCACCACTTTCAc > 2:4717365/1‑140 (MQ=255) gatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCAGCCT‑TCGCGTTACCCGGTGTTTTTCGGCCAAATTGATTTATCCAAAATGTAAGGCCCCGCTTGCaa > 2:2614568/1‑139 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTTTAGAAATACCCCA‑TCGCTTGTCCAGGTGTTTGTCGGCAAAATGGAATTATACACAATGTAAGGCACCTCTTTCAca > 2:3697159/1‑139 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATATAATTAAGCCT‑GCGCTTTACCAGGGGGTTTTCGGCAAAATTTTTTTTTCAAAAATGTACGGCACCACTTGCAcc > 2:3383732/1‑140 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTCATTTTCTCAAAATCAGCCA‑GCGCGTGACCCGGTGGTTTTGGGCGATATGGGTTTTTACACAAATTAAGGCACCACTTTCaac > 1:4611509/1‑138 (MQ=255) tgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTACTTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCt < 2:2335947/140‑1 (MQ=255) gagaTTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCtt < 2:3554159/140‑1 (MQ=255) aTTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTAAAATTTATCTAATTACCCCG‑GCGCTTGACCAGGGGTTTTTGGGCAATATGGATTTATACAGAAATTAACGCCCCACTTGGACCGTtgt > 2:3200116/1‑140 (MQ=255) ttCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTCATTTTCTGTAATAACGCCG‑GCCCGTTACCCCGTGTTTTTGGGCCAAATTTATTTATCGACAATTTACGGCACCGCTTGGACCGTtgttg > 1:1795926/1‑138 (MQ=255) tctcTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCt < 1:2050958/140‑1 (MQ=255) tctTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTGTATAAATTCGCCG‑GCGCGTGACCCGGTGGGTTTGGGGCATATTGATTTTTACAGAAATTAAGGCACCCCGTGGACCATTGtggtgg > 1:414362/1‑140 (MQ=255) tttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacga < 2:1555067/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:1178704/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:4295765/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:3637524/140‑1 (MQ=255) cAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGt < 2:4459533/140‑1 (MQ=255) caaTGATGGAAGCCGGCGCGGAGTCGCTGACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATAGGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGtt < 2:3431780/139‑1 (MQ=255) atgatgGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTct < 2:489954/140‑1 (MQ=255) tgatgGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTctg < 2:3878809/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:4717365/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:4573485/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:1588116/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAAGTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:2986503/140‑1 (MQ=255) aaGCCGGAGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:2571947/140‑1 (MQ=255) cGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGcc < 2:4152311/140‑1 (MQ=255) gcgGAGTCGCGTACATTTTCACTAATTCCGCCA‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTGGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCtga < 2:84947/140‑1 (MQ=255) tCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCTGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGaaaa < 1:3414371/140‑1 (MQ=255) tCGCTTACATTTTCTATAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGaaaa < 1:1695245/140‑1 (MQ=255) ttACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGTATTTATCCAGAATTTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATggg < 1:2965016/140‑1 (MQ=255) ttACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATggg < 1:2958956/140‑1 (MQ=255) ttACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATggg < 2:2427109/140‑1 (MQ=255) | AATCATTGAAGCGCAGCAGCATCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGG > NZ_CP034943/1111495‑1111771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |