| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,111,643 | C→A | 9.6% | L580I (CTA→ATA) | addB → | helicase‑exonuclease AddAB subunit AddB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,111,643 | 0 | C | A | 9.6% | 536.9 / 5.7 | 237 | L580I (CTA→ATA) | addB | helicase‑exonuclease AddAB subunit AddB |
| Reads supporting (aligned to +/- strand): ref base C (39/148); new base A (32/2); total (87/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.51e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 247 total aligned reads displayed.
AGCAGCATCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGA > NZ_CP034943/1111509‑1111782 | caTCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGcc < 2:4958640/140‑1 (MQ=255) caTCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGcc < 2:4176333/140‑1 (MQ=255) tCAGCAGGCGTGGGATGCAGTCATTCAGCTAGTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGccgg > 2:4576013/1‑138 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑gcgc < 2:215934/140‑1 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑gcgc < 1:2964323/140‑1 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTAATTTTGTGTAATTACGCCG‑gcgc > 2:1899044/1‑140 (MQ=255) gcagGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAAGGATGGAAGCCGGCGCGGAGTCGCGTTAATGTTCTCTACTTACGccgtggg > 1:4899885/1‑135 (MQ=255) cGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTCTCTAATTACGCCG‑GCGCGTGAc > 2:117589/1‑140 (MQ=255) cGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATATAATTCAGCCG‑GCGCTTTAc > 2:2696182/1‑140 (MQ=255) cGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTACAATTTGTCTAATTAACCCT‑GCGCtgtac > 1:3739378/1‑136 (MQ=255) gTGGGATGGAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAcc < 1:68433/140‑1 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGCGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAcc < 1:2284971/140‑1 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTAATTTTATATAAATACGCCT‑GCGCTTGaac > 2:1588116/1‑138 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAcc < 1:458648/140‑1 (MQ=255) gTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGAcc < 1:1773330/140‑1 (MQ=255) ggATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAgg < 2:431652/140‑1 (MQ=255) ggATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAgg < 2:1055519/140‑1 (MQ=255) gATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTATCTAATTCCGCCG‑GCGCGTGACCACgt > 2:1343465/1‑140 (MQ=255) cAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGCTGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTCTCTAAGTCCGCCT‑GCGCGTGACCAGGTGgtt > 2:3419864/1‑140 (MQ=255) cAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTGAACTTTTGTCTTATTACGCCTGGCGC‑TGGGCAGGTGttt > 1:2980329/1‑140 (MQ=255) cAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTAATTTTGTCGAATTAAGCCA‑GCGCGTGAACCGGTGttt > 1:2347294/1‑140 (MQ=255) cAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTACATTTTGTAAAAATACGCCT‑GCCCGTGTCCCGGGGttt > 1:4409320/1‑140 (MQ=255) aGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTAAATTTTATCGAATTACGCCT‑GCGCGTGACCACGTGGTTg > 1:3280208/1‑140 (MQ=255) gTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGt < 2:3297354/140‑1 (MQ=255) gTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGt < 2:4736282/140‑1 (MQ=255) tCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTAAAATTTATCTAATTCCCCCG‑GGGCTTGTCCAGgggtgtttc > 2:2420772/1‑135 (MQ=255) aTTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCgg < 2:3825445/140‑1 (MQ=255) aTTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTGAGTTTTTCTAATTACGCCA‑GCGGGTGTCCACGGGttttttgg > 1:1882447/1‑135 (MQ=255) ttCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTCTCTAAATACGCCG‑GCGCTTGACCAGGTGTTTGTAGGc > 2:2050958/1‑140 (MQ=255) ttCAGCTACTTGAGGAGTGTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTCATTTTATGTTCTTACCCCT‑GCGCGTGAGCCGGGGGTTGTgggg > 1:3142314/1‑139 (MQ=255) tACTTGAGGAGTTTGTTGAAATGATGGGGGATGCTGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATg < 1:4887674/140‑1 (MQ=255) aCTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTTTATAATTACGCCT‑GGGCTTTTCCACGTGTTTTTGGGCAATATgg > 1:3589604/1‑140 (MQ=255) aCTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTAAATTTTGTATAAATGCGCCG‑GCGCGTGGACACGGGTTTTTGGGCaaaaatg > 1:4221266/1‑135 (MQ=255) cTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATCTAATTACGCCT‑GCGCTTGACCCCGGGTTTGTCGGCAATATTGa > 2:263437/1‑140 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGTGATGATGCGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCGTGACCAGGTGTTTGTCGGCAATATGGAt < 2:855323/140‑1 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:4074052/140‑1 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGAt < 2:3989426/140‑1 (MQ=255) ttGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTGTATAATTAAGCCT‑GCGCTTTAAAAGGTGTTTTTAGGGAataatgat > 2:3833517/1‑135 (MQ=255) gagTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATGTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATc < 2:2234731/140‑1 (MQ=255) gTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCa < 2:3606347/140‑1 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTAATTTTTTCTAATTGCGCCT‑GCGCGTTTCCAGGTGGTTTTGGGGACTATTGATTTATTCaaaa > 1:4038608/1‑140 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATATAATTACACCA‑TCGCTTGACCACGGGTTTTTGGGCAAAATGGATTTTTACAGaa > 2:2964422/1‑140 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAAATTTATAAAAATACCCCA‑GCCCTTGACAACGTGTTTTTCGGCAATATTGATTTaaacacaa > 2:3178096/1‑133 (MQ=255) tgttgAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTTAAATTTGTCTAATTACGCCA‑GCGCGTGACCACGTGTTTTTGGGCAATATTGATTTATACACaa > 1:4873037/1‑140 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 2:3882730/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 2:413792/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 2:508391/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:858541/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:3448359/140‑1 (MQ=255) tgatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCG‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 1:385928/140‑1 (MQ=255) tgatgGGGGATGATGAGATGTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGc < 2:1269304/140‑1 (MQ=255) gttgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 2:185607/138‑1 (MQ=255) gatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 1:534487/140‑1 (MQ=255) gatgGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 1:3627381/140‑1 (MQ=255) gatgGGGGATGATGAGATGTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 1:2389766/140‑1 (MQ=255) gatgGGGGAGGATGAGATTTCTCTTGATTTGTTTCAGCATATGATGGAAGCCGGCGCGGAGTCGCGTACATTTTCTCTACTTCCGCCT‑GCGCTTGACCCGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCa < 1:3627321/140‑1 (MQ=255) gggggATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAAATTTGTATAAATGCGCCT‑TCGCTTGAACAGGTGTTTGTGGGGAATATTGATTTATACAGAATGTACGGCAAct > 2:1816198/1‑140 (MQ=255) gatgatGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTg < 1:322496/140‑1 (MQ=255) gatgatGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTg < 2:1626113/140‑1 (MQ=255) gatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTCTCTAAATAACCCT‑GCGCTTGACCACGTGTTTTTAGGCAAAATGGATTTATACAAAAAGTAAGGAACCACATGCAc > 2:2571807/1‑140 (MQ=255) gatgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACAATTTCTAGTATTAAGCCC‑TCGCCTTACCCGGGGTTTGTGGGCCAAAATGATATATAAAGAAAGTAACGCACCGCGTGCAc > 2:4544593/1‑140 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTATATAAATAACCCA‑GCGCTTGAAAAGGTGTTTTTGGGGAAAATTGATTTATACATAATGTAAGGCACCACTTGGAcc > 2:83518/1‑140 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTTTAGAAATACCCCA‑TCGCTTGTCCAGGTGTTTGTCGGCAAAATGGAATTATACACAATGTAAGGCACCTCTTTCAca > 2:3697159/1‑139 (MQ=255) atgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTAAATTTTATATAATTAAGCCT‑GCGCTTTACCAGGGGGTTTTCGGCAAAATTTTTTTTTCAAAAATGTACGGCACCACTTGCAcc > 2:3383732/1‑140 (MQ=255) tgaGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTACTTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCt < 2:2335947/140‑1 (MQ=255) gagaTTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCtt < 1:258556/140‑1 (MQ=255) aTTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCGTAAAATTTATCTAATTACCCCG‑GCGCTTGACCAGGGGTTTTTGGGCAATATGGATTTATACAGAAATTAACGCCCCACTTGGACCGTtgt > 2:3200116/1‑140 (MQ=255) tctTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTTCATTTTGTATAAATTCGCCG‑GCGCGTGACCCGGTGGGTTTGGGGCATATTGATTTTTACAGAAATTAAGGCACCCCGTGGACCATTGtggtgg > 1:414362/1‑140 (MQ=255) ttGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCaaa < 1:462866/140‑1 (MQ=255) tttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacga < 2:1550694/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:1109053/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:1657516/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:4366211/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:4295765/140‑1 (MQ=255) ttCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGAAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAacgac < 1:1955520/140‑1 (MQ=255) caaTGATGGAAGCCGGCGCGGAGTCGCTGACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATAGGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGtt < 2:3431780/139‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:2571807/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:4717365/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:1588116/140‑1 (MQ=255) aaGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAAGATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCa < 1:1348093/140‑1 (MQ=255) tCGCTTACATTTTCTATAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGaaaa < 1:1695245/140‑1 (MQ=255) cTTACATTTTATATAATTACGCCT‑GCGCTTGACCAGGTGTTTGTCGGGAAAATGTATTTATACCGAAATTACGGCACCGCTTGCACCGTTGTGGTGGGGGGAAAAGACGGCGTTCTGCCTGCACGCCCGGATGTAAATgg > 2:2793219/1‑140 (MQ=255) ttACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGTATTTATCCAGAATTTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATggg < 1:2965016/140‑1 (MQ=255) ttACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATggg < 1:2958956/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCGCCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:1510368/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 2:576978/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:1281520/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:608846/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:1028592/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:3372523/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:2812559/140‑1 (MQ=255) cATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATAGGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:2143998/140‑1 (MQ=255) cATTTTCTCTAAGTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 2:3589604/140‑1 (MQ=255) cATTTTCTCTAAGTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 2:3012093/140‑1 (MQ=255) aaTTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTGGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTg < 1:1163325/139‑1 (MQ=255) tttCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTTCACCGTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTg > 1:4697762/1‑140 (MQ=255) tctcTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTc > 1:3389172/1‑140 (MQ=255) tctcTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCGGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTc > 1:2708247/1‑140 (MQ=255) tctcTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAAGATGGATTTATCCAGAATGTACGGCACCTCTTGCACCGTGGTGCTGGCGGCAAACGACGGCGTTCTGCCTGCACGCCCTGAGGAAAATGGGGTGCTGTc > 1:2506953/1‑140 (MQ=255) tctAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGACAATGGGGTGCTGTCgg > 1:2075997/1‑140 (MQ=255) | AGCAGCATCAGCAGGCGTGGGATGCAGTCATTCAGCTACTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATTTCTCTTGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTTACATTTTCTCTAATTCCGCCT‑GCGCTTGACCAGGTGTTTGTCGGCAATATGGATTTATCCAGAATGTACGGCACCTCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTCTGCCTGCACGCCCTGATGAAAATGGGGTGCTGTCGGA > NZ_CP034943/1111509‑1111782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |