| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,901,671 | A→C | 14.6% | K411T (AAA→ACA) | EO946_RS14945 → | extracellular solute‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,901,671 | 0 | A | C | 14.6% | 477.8 / 26.8 | 196 | K411T (AAA→ACA) | EO946_RS14945 | extracellular solute‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (147/13); new base C (2/34); total (149/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.38e-25 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 205 total aligned reads displayed.
TCAAAGTCGAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTATATTCCTGCTTTGCTCTCCGTT > NZ_CP034943/2901536‑2901809 | tCAAAGTCGAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGTGAATAC‑AAACGa > 2:4868555/1‑140 (MQ=255)tCAAAGTCGAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGa > 2:4141293/1‑140 (MQ=255)tCAAAGTCGAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGa > 2:3704532/1‑140 (MQ=255) aaaGTCGAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACt > 1:4740287/1‑140 (MQ=255) aaaGTCGAGCCTTACTTCGACCGTTTATACGTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCGTATGGCTGACATTTTGAGGCCTCAAGAGATTTCGAAGACGCTGGGTAGAGACTAC‑AAACGACt > 2:2819339/1‑140 (MQ=255) gAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGa > 1:31630/1‑140 (MQ=255) gAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGa > 1:657637/1‑140 (MQ=255) gAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGa > 1:4086026/1‑140 (MQ=255) gAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGGGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGa > 1:3355601/1‑140 (MQ=255) aGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAg > 1:3703607/1‑140 (MQ=255) aGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGGGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAg > 2:747831/1‑140 (MQ=255) gCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGc > 2:4026204/1‑140 (MQ=255) gCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGc > 2:8143/1‑140 (MQ=255) aCCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAaca > 1:762869/1‑140 (MQ=255) cttttATATTTGCCAAACTGAATTTTGTTTGTCGTGGGCACGTTCGCCCATTATGTTAGGGCTCAATTTTTGACGCCACAATATTTTTCGAACAAGCGGGTAAGATAATAC‑ACACGACTCCGGGAGCAATCGGAAAcaca < 2:227514/138‑1 (MQ=255) tttATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAgg > 2:1836211/1‑140 (MQ=255) tttATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAgg > 1:3830140/1‑140 (MQ=255) tttATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAgg > 2:228513/1‑140 (MQ=255) tttATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAgg > 1:2589157/1‑140 (MQ=255) ttATACTTGCCAAACGGACTGTGGTATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACTACTCCGGGAGCAATCTGAAACACAggg > 2:97437/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 1:954988/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 1:339785/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 2:1343913/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 1:2863339/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 1:2790086/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 2:2661144/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 1:143080/1‑140 (MQ=255) gCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaag > 2:550398/1‑140 (MQ=255) ccAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTgaaga > 2:1961663/1‑140 (MQ=255) ccAAAAGGAATGTGGGCTGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGTAGAGAATAC‑AAACGACTCAGGGAGCAATCGGAAACACCGGGAGCTgaaga > 1:1235221/1‑140 (MQ=255) gTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCa > 2:113421/1‑140 (MQ=255) gTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCa > 1:4400580/1‑140 (MQ=255) ccTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAag > 2:1022192/1‑140 (MQ=255) tGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGATGGGAAGAGACTAC‑AAACGACTCCGTGAGCAATCGGAAAAACAGGGAGCTGAAGAACTATGAGTGACATCGGAagag > 2:1145912/1‑140 (MQ=255) ggCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGACACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGAc > 1:3068229/1‑140 (MQ=255) ggCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGAc > 1:876398/1‑140 (MQ=255) ggCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGAc > 1:523839/1‑140 (MQ=255) ggCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGAc > 1:2342525/1‑140 (MQ=255) cACGGTCGCACCGGAGGTTTGGGCTGAAATTTTGACGCCACACGAGATTTCGAAGAAGGTGGTAAGACAAAAA‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGt < 2:3269599/140‑1 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGACGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 1:2072767/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGACACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 1:2855985/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 2:634861/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 1:3975651/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 1:3860956/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 2:2765052/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 2:2428836/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCa > 1:2828068/1‑140 (MQ=255) ggTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAAGGAGTGAGATCGCAAGAGACGTTCa > 1:1791866/1‑140 (MQ=255) gTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCAt > 2:4688776/1‑140 (MQ=255) gTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCAt > 1:2789684/1‑140 (MQ=255) tCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCAtg > 1:1866364/1‑140 (MQ=255) ggggACTGGCGTTTTTGGCTCACTTTTTCACGCGTCAAGTGTTTTCCAAGAAGGGGGCACCTCAATAC‑ACACGACTCCGGGAGCAATCGGAAACACCGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCAtg < 2:2397646/138‑1 (MQ=255) atggtgCTTTTGGCTGAATTTTTGCCGCATAAAGTTTTTTCTAATAAGCTGGTATTAGAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGaaa < 2:3499388/135‑1 (MQ=255) gCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACCTGGAGCTGACGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGt > 1:4967050/1‑140 (MQ=255) gCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGt > 1:2922916/1‑140 (MQ=255) aTGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAg > 2:557523/1‑140 (MQ=255) aTGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAg > 2:492178/1‑140 (MQ=255) aTGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAg > 2:1504576/1‑140 (MQ=255) cttaCATTTTGACGCCTCAAGAGTTTTCGAAGACGGTGGGACGATAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGa < 2:4227646/137‑1 (MQ=255) cTGACATTTTGACGCCTCAAGAGATTTCGAAGACGCTGGGACGAGAATAC‑ACACGACTCCGGGAGCACTCGGAAGCACAGGGAGCTGAAGAACAATGAGGGTGATCGCAAGAGACGTTCATGTGACACAGGTGAAGCCGa > 1:4234486/1‑140 (MQ=255) cTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGa > 2:3623525/1‑140 (MQ=255) aCATTTTGACGCCTCAATAGATTTCGAATAAGCTGGGAAGAGAATAC‑AAACGACTCCGTGAGCAAGCGGAAACACACGGAGCTGAAGAACAATGAGTGAGATAGCAAGAGACGTTCATGTGAAACAGGAGAAGCCGaaaa > 2:1923457/1‑140 (MQ=255) aCATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGaaaa > 1:3750171/1‑140 (MQ=255) aCATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGaaaa > 1:242435/1‑140 (MQ=255) tttttGACGCCTAAATAGTTTCCCAACAAGCGGGGACCACAACAC‑CCACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAg < 1:3587637/139‑1 (MQ=255) tttGACCCCTAACGAGATTTCTAAGATGCTGGGAATTTAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCa < 1:4927575/140‑1 (MQ=255) gccGCCTCATGATATTTCGACGACGCTGGGAATACAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTc < 2:1772884/138‑1 (MQ=255) gacgacACAAGATATTTCGATGAAGGTGTGATAATAAAAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTc < 2:2549370/140‑1 (MQ=255) gACCCCTCAACCTATTTCGAACAAGGGGGGAACAGAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTc < 2:3955939/140‑1 (MQ=255) ccTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCa > 2:2376960/1‑140 (MQ=255) ccTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCa > 2:881257/1‑140 (MQ=255) cTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCACTCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCAc > 1:1523732/1‑140 (MQ=255) cTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCAc > 1:3165777/1‑140 (MQ=255) cTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCAc > 1:4653715/1‑140 (MQ=255) cTCAAGAGATTTCGAAGAAGATGTTAAGAGAATAC‑AAACTAATCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCAc > 2:3367890/1‑140 (MQ=255) taaaGAGATTTCGAAGATGCTGGTAACATAATAC‑CCACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACt < 1:4820650/138‑1 (MQ=255) tttttCGATTATGCTGGTAAGATAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTtggtg < 2:4780785/138‑1 (MQ=255) ttttCCAAGACGGGGGCAAGACAACAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTtggtgg < 1:275264/139‑1 (MQ=255) ttttCCAAGACGCTGGTAACACAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTtggtgg < 2:1364611/139‑1 (MQ=255) acttCGAAGACGCTGGCACCACAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAACCCGAAAAAGCAGTCCTCACTTtggtgg < 2:3191735/138‑1 (MQ=255) aTTTCGAATATGCTGGTAACA‑AATACAAAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTtggtgg < 1:4860972/140‑1 (MQ=255) ttCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGAt > 1:2620602/1‑140 (MQ=255) ttCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGAt > 1:2215819/1‑140 (MQ=255) ttCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGAt > 1:1008078/1‑140 (MQ=255) ttCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGAt > 1:4831890/1‑140 (MQ=255) ttCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGAt > 1:1350743/1‑140 (MQ=255) ttCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGAt > 1:350266/1‑140 (MQ=255) ttCCAACAAGCCGGTAACAGAAAAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGAt < 2:4086026/140‑1 (MQ=255) tccaagaagCTGGTAAGAGAAAAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATg < 2:1110886/137‑1 (MQ=255) tccaagaacCTGGGAAGATAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATg < 2:2873201/137‑1 (MQ=255) tCGAACAAGGTGGTAACACAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATg < 2:4657417/140‑1 (MQ=255) gaacaaGCTGGGAAGACAATAA‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGta < 2:3855445/140‑1 (MQ=255) agaagCGGGCAATATAATAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGtata < 2:1450078/140‑1 (MQ=255) catgCTGGGACGACAACCC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACACTGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTatat < 2:3127859/137‑1 (MQ=255) agaATAC‑AAACGAATCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTCAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAATGCAGTCCTCACTTTTGTGGATGTATATTCCTGCATTGct > 2:2924771/1‑140 (MQ=255) aacac‑acacGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTATATTCCTGCTTTGctct < 1:97437/137‑1 (MQ=255) aacac‑acacGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTATATTCCTGCTTTGctct < 1:4191694/137‑1 (MQ=255) aaTAC‑ACACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTATATTCCTGCTTTGctct < 1:3659546/140‑1 (MQ=255) aC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTATATTCCTGCTTTGCTCTCCg > 2:4667438/1‑140 (MQ=255) caaCGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGACGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTATATTCCTGCTTTGCTCTCCGtt < 1:1155341/139‑1 (MQ=255) | TCAAAGTCGAGCCTTACTTCGACCGTTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTCGGACAGGAGCTTATGGCTGACATTTTGACGCCTCAAGAGATTTCGAAGAAGCTGGGAAGAGAATAC‑AAACGACTCCGGGAGCAATCGGAAACACAGGGAGCTGAAGAACAATGAGTGAGATCGCAAGAGACGTTCATGTGAAACAGGTGAAGCCGAAAAAGCAGTCCTCACTTTGGTGGATGTATATTCCTGCTTTGCTCTCCGTT > NZ_CP034943/2901536‑2901809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |