| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,448,868 | A→C | 6.2% | intergenic (+88/‑46) | EO946_RS07560 → / → abbA | ribonuclease H‑like YkuK family protein/AbrB antirepressor AbbA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,448,868 | 0 | A | C | 6.2% | 762.9 / 23.8 | 240 | intergenic (+88/‑46) | EO946_RS07560/abbA | ribonuclease H‑like YkuK family protein/AbrB antirepressor AbbA |
| Reads supporting (aligned to +/- strand): ref base A (81/143); new base C (9/7); total (90/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 255 total aligned reads displayed.
AAACCGGATTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCGAG > NZ_CP034943/1448730‑1449003 | aaaCCGGATTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAaagtaag < 2:2812520/140‑1 (MQ=255)aaaCCGGATTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAaagtaag < 1:1502219/140‑1 (MQ=255)aaaCCGGATTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAaagtaag < 2:1690796/140‑1 (MQ=255) aCCGGATTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTACGtt < 1:1850023/140‑1 (MQ=255) gATTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGGTTTCTGATTACTTATTCTAGCGGTAGAGCTGACAGTAAGGTGTCt > 1:311695/1‑140 (MQ=255) aTTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCtt < 1:367022/140‑1 (MQ=255) aTACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCtt > 1:2743479/1‑140 (MQ=255) aTACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCtt > 1:1777479/1‑140 (MQ=255) aTACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCtt > 1:1737092/1‑140 (MQ=255) tACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCttt < 1:1031361/140‑1 (MQ=255) tACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCttt < 1:726998/140‑1 (MQ=255) tACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCGAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCttt < 1:526339/140‑1 (MQ=255) acTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTAGTCTAGCGGTAGAGCGGAAAGTAAGTTGTCTTGCTTTCag < 2:1009763/140‑1 (MQ=255) tGCCTTCAGCTATGCTAATCGTTTTACAAAATACTTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACGTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCagag < 1:2576525/140‑1 (MQ=255) tGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTGTGATTACTTATTCTAGCGGTAGAGCTGTAAGTAAGTTGTCTTGCTTTCagag > 1:1693892/1‑140 (MQ=255) tGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCagag < 1:650109/140‑1 (MQ=255) tGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCagag < 1:76622/140‑1 (MQ=255) tGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCagag < 1:2093187/140‑1 (MQ=255) tGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCagag > 1:2918281/1‑140 (MQ=255) tGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTGTCagag > 2:2385116/1‑140 (MQ=255) tGCCTTCAGCTATGCAAATCGTTTCACAAAATAATT‑TGGCTGAAAAAGCCAAGGTAAATGTCGAATTATGCGGTTGACGTTTGTTATCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCagag > 2:2005923/1‑140 (MQ=255) ccTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTACGTTGTCTTGCTTTCAGAGGt > 2:504954/1‑140 (MQ=255) ccTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCttt < 1:882879/133‑1 (MQ=255) ccTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGt > 2:1188848/1‑140 (MQ=255) ccTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGt > 2:1307614/1‑140 (MQ=255) ccTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGt > 2:83463/1‑140 (MQ=255) ccTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGt > 1:1913226/1‑140 (MQ=255) ccTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGt > 1:1826088/1‑140 (MQ=255) ttCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAt > 1:2532203/1‑140 (MQ=255) ttCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAt > 1:2641954/1‑140 (MQ=255) ttCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCGTTCAGAGGTAt > 1:2016766/1‑140 (MQ=255) tCAGCTATGCTAATCGTTTTACAACATAATTCCGGCTG‑AACAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 1:244796/140‑1 (MQ=255) tCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 1:595371/140‑1 (MQ=255) tCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 2:3016230/140‑1 (MQ=255) tCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 1:83463/140‑1 (MQ=255) tCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 1:1188848/140‑1 (MQ=255) tCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 1:1249146/140‑1 (MQ=255) tCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 1:289946/140‑1 (MQ=255) tCAGCTATGCTAATCGATTTACAAAATAAGTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTGGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 2:2464201/140‑1 (MQ=255) acAGCTATGCTAATCGTTTTACAAAATACTTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 2:1360745/139‑1 (MQ=255) gttGCTAATCGTTTTACAACATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTGATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGta < 2:2124550/138‑1 (MQ=255) tGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTGAGAGGTATTCAGtata > 2:2597166/1‑140 (MQ=255) tGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt > 1:3038904/1‑133 (MQ=255) tGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGtata > 2:2433671/1‑140 (MQ=255) tGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGtata > 1:2203315/1‑140 (MQ=255) tGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGtata > 2:1582183/1‑140 (MQ=255) tGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGtata > 1:3010966/1‑140 (MQ=255) tGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGtata > 1:2497931/1‑140 (MQ=255) ttCGTTTTACAAAATAATTCCGGCTG‑AAATGCCAAGGGAAATGTCGCATTATGCGGTTGACGTTTGTTGTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACa > 1:3074746/2‑140 (MQ=255) aTCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACa > 1:1406807/1‑140 (MQ=255) aTCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACa < 2:1515847/140‑1 (MQ=255) aTCGTTTAAAAAAATAATTCCGGCTG‑AAAAGCAAAGGGAAATGTCGACTTATGCGGTTGACGTTTGTTTTGTGAATACTTATTCTACAGTTAGAGCTGAAAGTAAGTTGTCTTGATTTCATAGGTATTCAGAATAAAACa > 2:1050815/1‑140 (MQ=255) ttACAAAATAATTCCGTCTG‑AAAAGCCAAGTGTAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTAATATGTATTCAGTATAAAACAggtgtc < 2:2670751/140‑5 (MQ=255) ttACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGc < 2:814741/140‑1 (MQ=255) ttACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACCTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGc < 2:729163/140‑1 (MQ=255) atTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGa < 1:336883/140‑1 (MQ=255) ttCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGaa > 2:2211535/1‑140 (MQ=255) ttCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGaa > 2:1774559/1‑140 (MQ=255) ccGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATg < 1:2801089/140‑1 (MQ=255) gCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTACGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGt > 1:2264325/1‑140 (MQ=255) aaaaGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTACGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTa > 2:3110822/1‑140 (MQ=255) aaaaGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt < 1:2717387/102‑1 (MQ=255) aaaaGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTAtt > 2:2717387/1‑102 (MQ=255) aGGGAAATGTCGAATTATGCGGTTGAAGTTTGTTTTCTGATTACTTATTCTAGCTGTAGAGCTGAAAGTAAGTTGTCTTTCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGaa < 2:1262550/140‑1 (MQ=255) aaTTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACagaa > 1:1276884/1‑140 (MQ=255) ttgtttTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTTCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTct < 2:2178222/140‑1 (MQ=255) ttgtttTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTct < 2:1107071/140‑1 (MQ=255) tgtttTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTctg < 2:231118/140‑1 (MQ=255) ttttCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTctgct > 1:1552297/1‑140 (MQ=255) ttCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCATAGTTATTCAGTATAAAACAGGGGGCCTGTTTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGa < 1:963482/140‑1 (MQ=255) ttCTGATTACTTATTCGAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGa < 2:757074/140‑1 (MQ=255) ttCTGATTACTTATTCGAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGa < 2:579695/140‑1 (MQ=255) aTTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATc < 1:1307614/140‑1 (MQ=255) tACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCt < 1:2819371/140‑1 (MQ=255) tACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCt < 2:1830856/140‑1 (MQ=255) cTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCGGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGa < 2:467601/140‑1 (MQ=255) attATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTTCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGa < 2:3053024/139‑1 (MQ=255) ttATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGACGAAGAACAAAAACTTCTGCTGAATATCCTGAt < 1:464235/140‑1 (MQ=255) ttATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGAt < 1:239601/140‑1 (MQ=255) ttATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGAt < 1:2294200/140‑1 (MQ=255) ttATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGAt < 1:433529/140‑1 (MQ=255) ttATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGAt < 2:1276884/140‑1 (MQ=255) ttATTCTAGCGGGAGAGCTGAAAGTACGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGAt < 2:905373/140‑1 (MQ=255) ttATTCTAGAGGTAGAGCTGAAAGTACGTTGTCTTGCAGTCAGAGGTATTCAGTATAAAACAGGGGGCCAGATTGCTAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGAt < 2:2831684/140‑1 (MQ=255) aTTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCa < 2:2292887/140‑1 (MQ=255) aGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCAt < 1:687376/140‑1 (MQ=255) aGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCAt < 1:2995075/140‑1 (MQ=255) aGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCAt < 2:2190912/140‑1 (MQ=255) aGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCAt < 2:2077384/140‑1 (MQ=255) aGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTACAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCCAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCCGATCAACCAt < 2:1703632/140‑1 (MQ=255) tAGAGCTGAAAGTACGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTa > 2:1920066/1‑140 (MQ=255) agCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGc < 2:2532203/140‑1 (MQ=255) aaaGTACGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCg > 1:144009/1‑140 (MQ=255) aaaGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCg < 1:2134306/140‑1 (MQ=255) aaaGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCg < 1:933992/140‑1 (MQ=255) aaaGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCg < 1:504000/140‑1 (MQ=255) agtacgtTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCGAg > 1:796233/1‑140 (MQ=255) agtacgtTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGGGACCGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCCTCGAg > 1:2544668/1‑140 (MQ=255) agtaagtTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGTATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACACAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCGAg < 1:1342532/140‑1 (MQ=255) agtaagtTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCGAg < 2:3010966/140‑1 (MQ=255) | AAACCGGATTCATACACTGCCTTCAGCTATGCTAATCGTTTTACAAAATAATTCCGGCTG‑AAAAGCCAAGGGAAATGTCGAATTATGCGGTTGACGTTTGTTTTCTGATTACTTATTCTAGCGGTAGAGCTGAAAGTAAGTTGTCTTGCTTTCAGAGGTATTCAGTATAAAACAGGGGGCCTGATTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAATATCCTGATCAACCATGAGTATGCCATCGAG > NZ_CP034943/1448730‑1449003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |