Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0580CG29.7% 269.2 / 38.2 160K571N (AAG→AAC) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (35/67);  new base G (43/0);  total (93/67)
Fisher's exact test for biased strand distribution p-value = 1.90e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 184 total aligned reads displayed.

CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633919‑634197
                                                                                                                                           |                                                                                                                                            
 atggatggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttct                                                                                                                                             <  2:2412335/140‑1 (MQ=255)
      tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTc                                                                                                                                        >  2:1065085/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCa                                                                                                                                      >  1:3228414/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCa                                                                                                                                      <  2:2617379/140‑1 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGATTTGTTTTTACa                                                                                                                                      >  1:3053292/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTTCa                                                                                                                                      >  1:2776239/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTGCa                                                                                                                                      >  1:1024115/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGGGGTCTTTGTTTTTGCa                                                                                                                                      >  2:2853233/1‑140 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                     <  2:3229948/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                     <  1:3081530/140‑1 (MQ=255)
          ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCGTTCTTTTTcgaga                                                                                                                                    >  2:1136354/1‑136 (MQ=255)
                cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                              <  1:1907342/140‑1 (MQ=255)
                 ttttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                             <  1:1168361/140‑1 (MQ=255)
                 ttttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                             <  1:2414402/140‑1 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTACTGTTTTCTTCAATGGGTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGTCGTTCTGTCTTTTTGCATTAttgttat                                                                                                                            >  2:1297537/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTCTTTTTGCATTCTTTttct                                                                                                                            >  2:682366/1‑140 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTCGAATCtttttat                                                                                                                            >  2:2973776/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTTCATTCtttttat                                                                                                                            >  1:3036985/1‑138 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTGTTTTTGCAATATTTttatt                                                                                                                           >  2:1448997/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCCTTATTTttgtt                                                                                                                           >  2:2280539/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTGTTTGCATTATTTttgtt                                                                                                                           >  2:749033/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTGTCTTTTTGCCTTCTTTttgtt                                                                                                                           >  2:1901425/1‑140 (MQ=255)
                         gTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTATTTTTGAAATCTTTTTGTTCTTCat                                                                                                                     >  1:1601811/1‑140 (MQ=255)
                          tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTCTTTTTGCATTCTTTTTCTTATTAata                                                                                                                    >  2:2375852/1‑140 (MQ=255)
                          tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTGTTTTTCCAATATTTTTGTTCTTAata                                                                                                                    >  2:559403/1‑140 (MQ=255)
                                  gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGtt                                                                                                           <  1:749033/140‑1 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCATTGTTTTTATTCTTCATAT‑GAACGttt                                                                                                          >  2:1683400/1‑140 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATCGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACAATGTTTTTGTTGATCAAAT‑TAAAGttt                                                                                                          >  1:2228230/1‑140 (MQ=255)
                                    tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTTTTTTTGGATTTTTTTTGTTTTTTATAT‑TAACGtttt                                                                                                         >  1:1960516/1‑140 (MQ=255)
                                    tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTCTTTTTCCATTCTTTTTCTTGTTCATAT‑GAACGtttt                                                                                                         >  2:142671/1‑140 (MQ=255)
                                    tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTGTTCTTGATAT‑GAACTtttt                                                                                                         >  2:795471/1‑140 (MQ=255)
                                    tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTATTTTTATTCTTCAAAT‑GAACGtttt                                                                                                         >  2:1577451/1‑140 (MQ=255)
                                    tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGGTTTTTTTTGCATTATTTTTATTGTTAATAT‑TAACGtttt                                                                                                         >  1:280917/1‑140 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGt                                                                                                     <  1:267469/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGt                                                                                                     <  2:2396216/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGt                                                                                                     <  1:1805962/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGt                                                                                                     <  1:1389176/140‑1 (MQ=255)
                                        cGGATCACATAGCAAGTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGt                                                                                                     <  2:1846564/140‑1 (MQ=255)
                                             cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGc                                                                                                <  1:724767/140‑1 (MQ=255)
                                                       ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTGTTTTTGTTCTTCATAT‑GAACGTTTTGATTGAGGCTTaaaagaat                                                                                      >  2:2779518/1‑134 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTAGATTCTTTTTGTTATTCATAT‑GAACGGTTTGAGTCAGGCTTTACCGAAGcc                                                                                    >  2:1956772/1‑139 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCATTATTTTTCTTCTTCATAT‑TAAAGTTTTTAGTAAGGCTTAAccctgtct                                                                                    >  2:3364071/1‑134 (MQ=255)
                                                            cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTCGTTGTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACCTTTTTAGTAAGGCTTAACCGAAGCAGGc                                                                                 >  2:2834917/1‑140 (MQ=255)
                                                            cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTTGTTGCATTCTTTTTCTTCTTGCTATGGACCGTTTTG‑GTGAGGGTTAACCGCAGCAggg                                                                                 >  2:1795179/1‑139 (MQ=255)
                                                            cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTGTTTTTGTTCTTCATAT‑GAAAGTTTTTATTGAGGGTTTAACGAAGCAggg                                                                                 >  2:2103136/1‑139 (MQ=255)
                                                            cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTATTTTTATTCTTAATAT‑GTACGTTTTTGGTGAAGGTTAAACGAACAAGGc                                                                                 >  2:1522451/1‑140 (MQ=255)
                                                            cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTTGCGGTGTTTGTTTTTGGAATGTTTTTGTTGTTCATAT‑GAAGGTTTTTTGTGAGGCTTAAACGAAGCAggg                                                                                 >  1:1690105/1‑139 (MQ=255)
                                                                 tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCGTTGTTTTTCTTCTTAATAT‑GAACGTTTTTTGTCAGGCTTAAACGAAGCAGGCGtttt                                                                            >  2:3158988/1‑140 (MQ=255)
                                                                      aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGGTTTTGCATTATTTTTGTTCTTAAAAT‑GAAACTTTTTAGTGAGGCGTAACCGAAACAGGCGTTTTTTAgg                                                                       >  2:2077123/1‑140 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:35406/140‑1 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:1448997/140‑1 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:2912952/140‑1 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTCTTCTGCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:2280539/140‑1 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGGGGCGTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAGTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:559403/140‑1 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTCGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  2:2706875/140‑1 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCCTTGTTTTTTTTCTTGATAT‑GTATGTTTTTTTTGAGGCGTAACCGGAGCAGGGGTTTTTTgggtt                                                                     >  1:113575/1‑138 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt                                                                     <  2:113489/140‑1 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTGTTCTTCATAT‑GAAAGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGAt                                                                     >  2:2632593/1‑140 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGGTGTTTCTTTTTCCAATCTTTTTATTCTTAATAT‑GAACGTTTTGATTCAGGCTTAACAGAAGCAGGCGTTTTTTCGGAt                                                                     >  2:2332331/1‑140 (MQ=255)
                                                                            ttcttcAATGGTTTGAACAGTGTCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGCCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCct                                                                 <  1:2084259/140‑1 (MQ=255)
                                                                            ttcttcAATGGTTGGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCct                                                                 <  1:2853233/140‑1 (MQ=255)
                                                                               ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTGTTTTTTCATTGTTTTTCTTGTTAATAT‑TGACGTTTTTTGTGAGGGTTAACCGCAGCCGGGGTTTTTTGGGGTTGCTCtt                                                              >  2:1130835/1‑140 (MQ=255)
                                                                                     ggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAt                                                        <  1:1501870/140‑1 (MQ=255)
                                                                                           aaCAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTCCAGTCTTTTTCTTCTTCATAT‑GAACGGTTTTTGTGAGGGTTTAACGAACCCGGCGTTTTTTTGGGTTGCTCTTGGTGCttgtgtt                                                  >  1:1896694/1‑135 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTCCATTCTTTTTCTTCTTCATAT‑TAACGTTTTGATTCAGGCTTAACCGAAGAAGGCGTTTTTTAGGTTTCCAGTTTGTGATTAAttttgaac                                             >  2:584343/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTTTGTTATTGAAAT‑TTAAGTGTTTATTGAGGGGTTAACGAATCAGGCGGTTTTTTGGGTTGCGCGTGGGGATTGAttttatgc                                             >  1:1495220/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTGTTTTTTCATTGTTTTTGTTGTTAATAT‑GAAAGTTTTGTTGAAGGCTTAAACCAAGCAGGCGTTTTTTGGTGTTCCTCTTTGTGGTTGAttttttgc                                             >  1:2591704/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTAGTCTTGATAT‑TAACGTTTTTAGTGAGGCTTAACCGAAAGAGGCGTTTTTTAGGTTTGCTCTTGCTGATTAATTTTCTcc                                             >  2:1457656/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGGTTTTTGTGATTGCTCTTGCTGATTCATTTTGTcc                                             >  2:1982559/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTACATTGTTTTTCTTCTTAATAT‑GAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTGGGATTGCTCTTGGTGATTCATTTTGTcc                                             >  2:2552082/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTCTTTTTGTTCTTCATAT‑GAACGTTTTTTGTCCGGCTTTACCGAAGCCGGCGTTTTTTCGGATTGCTCTTGGTGGTTCATTTTGTcc                                             >  1:2428516/1‑140 (MQ=255)
                                                                                                   cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt                                          <  2:1100822/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  2:273571/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  1:908686/140‑1 (MQ=255)
                                                                                                            cttcAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTGTTTTTGTTCTTAATAT‑GAAAGTTTTGAGTGAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCTCTTTCTGATTAATTTTCTCCAATTAAAtctgg                                 >  2:646626/1‑139 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  2:3036985/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAGTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  1:3241564/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:2175615/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:563291/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  2:44885/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTGCATCT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:68544/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTATTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  2:1601811/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCATTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  2:2014253/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  1:1563944/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  1:600235/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  1:1057374/140‑1 (MQ=255)
                                                                                                                                    gttgttTCTTTTTCCATTCTTTTTCTTCTTAATAT‑GAACGTTTTGATTCAGGCTTTAACGAAGCAGGCGTTTTTTAGGATTACTCTTTCTGATTCATTTTATACAATTAAAGCTTCTCTGTTTTTTTATACGTAtaataa         >  2:985501/1‑140 (MQ=255)
                                                                                                                                    gTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑TAACGTTTTTAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTCCTATTGCTGATTAATTTTATCCAATTAAAGCTGCTCTGTTTTTTTATACGTAtaataa         >  2:2931326/1‑140 (MQ=255)
                                                                                                                                    gTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTTCTGATTCATTTTCTCCAATTCAAGCTGCTCTTTTTTTTTATACGTAtaataa         >  2:2322511/1‑140 (MQ=255)
                                                                                                                                    gTTCTTTCTTTTTCCATTCTTTTTCTTCTTAATAA‑GAACGTTTTGAGTCAGGCTTAACCCAAGCAGGCGTTTTTTAGGATTACACTTTCTGATTAATTTTATACAAATAAAACATCTATGTTTTTTTATACGTAtaaaaa         >  2:928269/1‑140 (MQ=255)
                                                                                                                                        tttctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGt     <  2:2829986/140‑1 (MQ=255)
                                                                                                                                        tttctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGt     <  2:2739869/140‑1 (MQ=255)
                                                                                                                                         ttctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa    <  1:646626/140‑1 (MQ=255)
                                                                                                                                         ttctttGTCCATTCTATTTAGTCTTCCTAT‑GAAGGTTTTGTGTCAGGCTTAACAGAAGCAGGCGTTTTTTCTGATTGCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa    <  1:2973776/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATCT‑GACCGGTTTGAGCCAGGCTTAACCGAAGCAGGCGTTTTTGCGGATGCCTCGTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:1758403/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:3228414/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:987430/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:659400/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:2748059/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:2549183/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                            
CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAT‑GAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633919‑634197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑