| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 177,053 | 0 | C | A | 27.7% | 271.8 / 24.0 | 155 | intergenic (+226/‑46) | EO946_RS01020/EO946_RS01025 | alcohol dehydrogenase/SulP family inorganic anion transporter |
| Reads supporting (aligned to +/- strand): ref base C (44/68); new base A (42/1); total (86/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.30e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 178 total aligned reads displayed.
CTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTG > NZ_CP034943/176914‑177192 | cTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 1:1077539/140‑1 (MQ=255)cTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 2:3002857/140‑1 (MQ=255)cTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 2:1590316/140‑1 (MQ=255)cTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 2:156866/140‑1 (MQ=255)cTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 2:1461475/140‑1 (MQ=255)cTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 1:2837937/140‑1 (MQ=255)cTTGAGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 2:3112495/140‑1 (MQ=255)attGCGTATTTGATAAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 2:641686/139‑1 (MQ=255) gcttATTTCATCAAAATTTAATATGATACTCTTTGTATAATAAATCCTTGCCTAAAAACAACATACTCAACGTGTCCTCTTTTTCTCAGTTCGTTTTACATACAAATATACAGTAAAATAAATAAAGCACCCCATacaaa > 2:1280048/4‑139 (MQ=255) gCGTATTTGATCAAAATTTAATATGTTACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCACCGGTCGTTTTGCTTTCAATTATGACGTAAAATAAAGAAAGCTCCCACaacaac > 1:3412949/1‑140 (MQ=255) gCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac > 1:3441676/1‑137 (MQ=255) gCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCGTTAATTTGTACCCTAAAATAAAGAAATCTACCAATaaaac > 2:566724/1‑140 (MQ=255) gCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTAATTTAATTTAAACCGTAAAATAAAGAAAGATGCCAATaaaaa > 2:914824/1‑139 (MQ=255) tATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACaaa < 1:50009/140‑1 (MQ=255) tttGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTAATTTCTGCCCTAAAATAAAGAAACCTCCCAATACAACaaaaa > 2:394729/1‑138 (MQ=255) gATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTAATTTATCCCGTAAAATAAAGAAACCTACCAATAAAACAAAAACgg > 2:2934275/1‑140 (MQ=255) tCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTg < 1:223882/140‑1 (MQ=255) cAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTCCTTTCAATTCTCCCGTAAAAAAAAGAAACCACCCAAAAAAACAAAAAAGGTGc > 2:1260888/1‑140 (MQ=255) tACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTGATTTCTACCCTAAAAAAAATAAACCACCCAAAAAAAAAAAAAAGGGGCGGATTTAATTTTTaa > 1:3281938/1‑140 (MQ=255) tACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTAATTTAACCCCTAAAATAAAAAAACCTCCCAAAAAAACAAAAAACGTGCGGGTTTAATTTTTaa > 2:2170258/1‑140 (MQ=255) tACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCAATTGTCCCGTAAAAAAAATAAAGCTCCCAATACAACAAATAAGGTGCGGATTTAttttttta > 2:2083665/1‑138 (MQ=255) tACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTACATTCATTTCTCAAGAAAAATAAACTAAGCTCCCAAAAAAACAAAAAAGTTGCGTATTTATTTTTTaa > 2:2581218/1‑140 (MQ=255) tACTATTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCAGGTCGTTTGTAATTTATTTCTGCCGTGAAAAAAAAAAAAGTCCCAAAACAACAAATACCGTGGGGAttttttttttta > 1:1303485/1‑138 (MQ=255) ctctTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTaaaa < 2:3393258/140‑1 (MQ=255) ctTTGTATAATAACTCCGTGCCTCAAAACACCAGACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAg < 2:1212533/140‑1 (MQ=255) tttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTAATTTGTCCCGTAAAAAAAATAAAACACCCAAAAAAAAAAATAACGTGGGGGTTTATTTTTTtaaaatg > 1:2891964/1‑138 (MQ=255) tttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTACCGTAAAAAAAAAAAAACACCCAAAAAAAAAAAAAAGGGGCGGATTTATTTTTTaaaaaag > 1:3391889/1‑138 (MQ=255) ttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGa < 1:2870430/140‑1 (MQ=255) ttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGa < 1:2413810/140‑1 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCACCGTGTCCTCTTTTTCTCCGGTGGTTTTCCTTTCATTTCTCAAGTAAAATAAAGAAAGCTCCAAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAg < 1:2651145/140‑1 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTTCTTTAATTTGTACCGTAAAATAAAATAATCACCCAAAAAAAAAAAAACGGTGGCGGTTTATTTTTTTAAAAgatc > 1:2035657/1‑137 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGGTTTGAATTGTGGCGTAAAATAAAAAAAACTCCCAAAAAAAAAAAAAAGGTGGGGCTTTATTTTTTAAAAAGGAg > 1:1850141/1‑140 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTCCGTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGGGCGGGTTTATTTTTTAAAAAGGAg > 2:2776859/1‑140 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCGTTTTCTCCGGTCGTTTTACGTTGATTTGTGCCGTAAAATAAAGAAAGCTACCAATAAAAAAAATACCGGGGGGGTTTATTTTTTAAAAAgggg > 1:364671/1‑138 (MQ=255) ataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTATCCCCTAAAAAAAATAAAGCTACCAAAAAAAAAAAAAACGTTCGGATTTATTTTTTAAAAAAGAGTCGTta > 2:2870430/1‑140 (MQ=255) taaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTGAATTGTCCCGTAAAATAAAGAAAGCTCCCAATAAAACAAAAACGGGGCGGCTTTATTTTTTAAAAATGAGTAGTtat > 2:457948/1‑140 (MQ=255) taaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTGTCCCGTAAAATAAAGAAAGCTCCCAAAACAAAAAATAAGGTGCGGATTTATTTTTTAAAAATGAGTCGTtat > 2:2445160/1‑140 (MQ=255) aCTCCTTGCCTCAAACCAACATACTCCACGTGTCCTCATTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 2:2025960/140‑1 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACACATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 1:2152159/140‑1 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 2:1414260/140‑1 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTGATTTGTGCCGTAAAATAAAAAAATCAACCAATAAAAAAAATACAGTGCGGGTTTTTTTTTTTAAAATGAGGCGGTAGAtt > 1:985593/1‑140 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTGTCCCGTAAAATAAAGAAAGCTCACAATACAAAAAATACGGTGCGGATTTATTTTTTAAAAATGATTAGTTATAtttt > 2:1684787/1‑139 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATAAAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTg > 2:1887071/1‑140 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCAATTGTCCCGTAAAATACAGAACGCTCCCAATACAACAAATTCGGGGCGGAGTTATTTTGTTACAAGGAGGCGGTTTATTTg > 2:1799425/1‑140 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTAATTTATCCCGTAAAATAAATAAAGCTCCCAAAAAAACAAATAAGGTGCGGATTTATTTTTTAAAAAGGAGTGCTTATAtttt > 2:341852/1‑139 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGGTTTGCTTTGTGCCCGAAAATAAAAAAAGCTCCCCATACAACAAAAACCGTGGGGCTTTATTTTTTTAAAAGGAGTGGGTTTATTTg > 1:3030723/1‑140 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCGTTGATTTATGCCGTAAAATAAAAAAAGCGCCCCAAACAAAAAAAAAGGTGCGGATTTATTTTTTTATAAGGAGTGGttttttttt > 1:2983064/1‑139 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCGGTCATTTGGCCCCTAAAAAAAACAAAGCTCCCAAAAAAAAAAAAAACGGGCGGGTTTTTTTTTTAAAAAAGAGTCGTTATAtttt > 1:1036534/1‑139 (MQ=255) tGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAACTCCCAAAAAAACAAAAACGGTGCGGATTTATTTTTTAAAAAAGAGTCGTTATAATTTaat > 2:2940139/1‑140 (MQ=255) tGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTGATTTGTGCCCTAAAATAAAGAAAGCTCCCAATAAAACAAAAAAGGGGGGGGTTTATTTTTTTAAAATGAGTCGTGGTATTTGaat > 1:194735/1‑140 (MQ=255) tGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTACGGTCGTTTTCCTTTCATGTCTCCCCTAAAAAAAAGAACGCTGCCCATACAACAATAACGGTGCGGATTTATTTTTTAAAAAGGTGTGGTTATATTTGtat > 2:3015877/1‑140 (MQ=255) ccTCAAACCACCAGACTCCACGTGTCCTCGTGTTCTCCGGTCGTTTGCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAAGACACCAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGaat‑aa < 1:5679/140‑1 (MQ=255) ccTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGaat‑aa < 1:2690074/140‑1 (MQ=255) ccTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGaat‑aa < 1:3150906/140‑1 (MQ=255) aaaaCAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTGCCGTAAAATAAAGAAAGCTCCCAATACAACAAATAAGGGGCGGATTTATTTTTTAAAAAGGACTCGTTATATTTTaaa‑aaatat > 2:3208498/1‑136 (MQ=255) aaaaCAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCGTTGATTTATCCCCTAAAATAAAGAAAACTCCCAAAAAAAAAAAAAACGTGGGGATTTATTTTTTAAAAAGGAGTCGTTTTATTTGAAA‑AATAGt > 2:6691/1‑140 (MQ=255) aaaaCAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTCTCCCGTAAAATAAAGAAAGCTGCCAATACAACAAAAACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGt > 2:2979289/1‑140 (MQ=255) aacaacATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGttt < 2:2856919/140‑1 (MQ=255) aacaacATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGttt < 1:3208498/140‑1 (MQ=255) aacaacATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGttt < 2:2483913/140‑1 (MQ=255) aacaacATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGttt < 2:690989/140‑1 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTGTCCCGGAAAATAAATAAAGCTCCCAAAAAAACAAAAAAGGTGGGGGTTTATTTTTTTAAAATGAGTGGTTTTTTTTTGAT‑AATAGtttttaat > 1:144040/1‑136 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCGTTGATTTGTCCCCGAAAAAAAAGAAACCGCCCCAAACAACAAATACCGGGGGGGTTTTTTTTTTTAAAAGGGGGGGTTATTTTTTTATAAAAAGTTTTaat > 1:851992/1‑138 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTAGGTTCATTTGTCCCCTAAAATAAAAAAACCTCCCAAAAAAACAAAAAACGGGGGGAGTTATTTTTTTAAAAGGAGTCGGTGTTTTTTGAT‑AATATttttttaa > 1:1937727/1‑136 (MQ=255) aCTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTGACATTaa < 1:563363/140‑1 (MQ=255) tctaCGTGTCCTCTTTTTCTGCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAATAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAATGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAag < 1:3368/137‑1 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTCTCCCGTAAAATAAATAAAGCTCCCCATACAACAAATACGGTGCGGATTTATTTTTTAAAAATGAGTGGTTTTATTTTTAT‑AATATTTTTACATTAAag > 2:491227/1‑140 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTAAATTGTCCCGTAAAATAAATAAAGCTCCCAATACAAAAAATAAGGTGCGGATTTATTTTTTAAAAAGGAGTGGTTATATTTGAAT‑AATAGTTTTTAATTaaaa > 2:2279203/1‑139 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTGATTTGTCCCGTAAAATAAAGAAACCTCCCAAAAAAAAAAATACGGTGGGGATTTATTTTTTTAAAAGGGGTGGTTATATTTTTAT‑AAAAGTTTTACATTAAag > 2:950826/1‑140 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTGATTTAGACCGTAAAAAAAAGAAACCTCCCCATAAAAAAAAAACGGTGGGGAGTTATTTTTTAAAAAGGAGTCGTTATATTTGTAT‑AAAAGTTTTTAATTTAag > 2:1051584/1‑140 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTCATTTCTACCGGAAAATAAAGAAAGCGCCCAAAACAACAAAAAAGGGGGGGATTTATTTTTTAAAAAGGAGTCGGTATATTTGAAT‑AATAATTTTACAATAAagca > 2:554416/1‑140 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTGGACCGTAAAATAAAGAAAGCTCCCAATAAAAAAAATAACGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATAATTTTAT‑AATAGTTTTAAATTTAatca > 2:2773166/1‑140 (MQ=255) aCGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACACCAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 1:1608880/113‑1 (MQ=255) gtgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAgcagca < 2:3281938/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCaa < 2:2080734/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCaa < 2:1890803/140‑1 (MQ=255) tCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTCTGCCGTAAAATAAAGAAAGCTCCCAATAAAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTGGTTATATTTTTAT‑AATATTTTTAGATTTAATCAGAAATg > 2:2051208/1‑140 (MQ=255) tCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTGTGCCGTAAAAAAAAGAAACCTCCCAAAAAAACAAAAACCGTGCGGCTTTATTTTTTAAAAAGGAGTCGGTATATTTGAAT‑AAAAGTTTTAAAATTAAGCAGCaaag > 2:507910/1‑138 (MQ=255) ctctTTTTCTCCGGTCGTTTTGCTTTAAATTCTCCCGTAAAAAAAAAAAAACTCCCAAAACAACAAATACGGTGCGGAATTATTTTTTAAAAAGGAGTCGGTATATTTGAAA‑AAAATTTTTAGATTAAAGCAGCAAAggg > 2:3321559/1‑139 (MQ=255) tcCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAata < 1:1260888/140‑1 (MQ=255) gTCGTGTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAAAAAATACGGTGCGGCTTTATTTTTTAAAAAGGGGTCGTTATATTTTAAT‑AATAGTTTTAAATTAAATCAGCCATTGTTAGGGGCTATCCg > 2:2405379/1‑140 (MQ=255) tctcCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTg > 1:152602/1‑140 (MQ=255) tcCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGc > 2:845756/1‑140 (MQ=255) tcCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGc > 1:2527662/1‑140 (MQ=255) tAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCAgttt > 2:828796/1‑140 (MQ=255) tAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTAAATTAAAGCAGCAATGGTTAGGGAATATCCGAACAGAAAATCTTGCTGGAAattt > 2:1244793/1‑140 (MQ=255) aaaTAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAg < 1:847014/140‑1 (MQ=255) aaTAAAGAAAGCTCCCAATACAACCAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGt < 1:2118128/140‑1 (MQ=255) aaTAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGt < 1:2344772/140‑1 (MQ=255) aaTAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGt < 1:1984670/140‑1 (MQ=255) agaaagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGt > 2:358527/1‑140 (MQ=255) agaaagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGt < 2:2891964/140‑1 (MQ=255) gaaagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 1:2940139/140‑1 (MQ=255) gaaagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 1:603448/140‑1 (MQ=255) gaaagCTCCCAAGACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGtt < 2:2561612/140‑1 (MQ=255) aaagCTCCCAATACAACAAATCCGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTa < 2:2983064/140‑1 (MQ=255) aaagCTCCAAATACAACAAATACGGTGCTTATTTTTTTTTTAAAAATGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTa < 2:1937727/140‑1 (MQ=255) aagCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAg < 1:6691/140‑1 (MQ=255) tCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCAtt > 2:527918/1‑140 (MQ=255) cccAATACAACAAAGACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTa < 1:2928273/140‑1 (MQ=255) | CTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAATACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAAT‑AATAGTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAAAGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATACCTG > NZ_CP034943/176914‑177192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |