Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349432,991,2270TG27.8% 268.7 / 26.4 170intergenic (+28/‑179)gbsR/bslAtranscriptional regulator GbsR/biofilm‑surface layer protein BslA
Reads supporting (aligned to +/- strand):  ref base T (46/76);  new base G (47/0);  total (93/77)
Fisher's exact test for biased strand distribution p-value = 7.01e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 179 total aligned reads displayed.

ATACGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGG  >  NZ_CP034943/2991091‑2991363
                                                                                                                                         |                                                                                                                                          
ataCGAGCAACTGGAAAGCTCTCAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGg‑tttt                                                                                                                                         >  2:2249374/1‑140 (MQ=255)
ataCGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGt‑gttt                                                                                                                                         >  2:1796479/1‑140 (MQ=255)
ataCGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGt‑gttt                                                                                                                                         >  1:3349595/1‑140 (MQ=255)
   cGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGt‑gtttttt                                                                                                                                      >  2:1298629/1‑139 (MQ=255)
   cGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTg                                                                                                                                      >  2:145180/1‑140 (MQ=255)
   cGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TGTTTTg                                                                                                                                      >  2:552674/1‑140 (MQ=255)
     cgCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGtt                                                                                                                                    <  2:809548/139‑1 (MQ=255)
     aGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGtt                                                                                                                                    <  2:559713/140‑1 (MQ=255)
      gCAACTGGAAATCTCTAAAGCTTACTATAATATGCTGAAACTTCTTGCTGAATCTTTGCAGAGCTGGGAAATTTTTAAATTTATAAAGATTGAAAAAAAGTAATACAAAAACGAATGCGAAACCGGGCTT‑GTTTTTAttt                                                                                                                                   >  1:654395/1‑139 (MQ=255)
      gCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTATTACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGttg                                                                                                                                   >  2:790694/1‑139 (MQ=255)
      gCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGt‑tttttttttg                                                                                                                                   >  2:1628848/1‑139 (MQ=255)
      gCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑Ttgtttgttt                                                                                                                                   >  2:2968979/1‑139 (MQ=255)
          cTGGAAAGCTCTAAAGCGTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATCCCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTGtttt                                                                                                                               >  2:1366202/1‑140 (MQ=255)
                   tctAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAAt                                                                                                                      <  2:2883682/140‑1 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAGAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTATTTAATTAATAaaaa                                                                                                             >  2:1481051/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAATCAAAAACGCCTGGGAAACCGGGCGT‑GGTTTTTTTCTTTTTTTTTTTATTTCTAaaaa                                                                                                             >  1:487657/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTTTTTTTTTTTTTTAATTAAAACaaa                                                                                                             >  2:1249872/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTTTATTTGTTATTTAAATAAAACaaa                                                                                                             >  2:229385/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACaaa                                                                                                             >  2:3330630/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTGTTTTTTTTTTAAATAATAaaaa                                                                                                             >  1:1296912/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTATTTTTTATGTAATTAATACaaa                                                                                                             >  1:799343/1‑140 (MQ=255)
                            tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGAGT‑TTTTTTGTTATTTTTTATGTAATTAATACaaa                                                                                                             >  2:1399742/1‑140 (MQ=255)
                             aCTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAAAAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAAt                                                                                                            <  2:911497/140‑1 (MQ=255)
                                 tGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTTTCTTTTTTATTTAATTACTAAAAATTTGa                                                                                                        >  2:3129487/1‑140 (MQ=255)
                                 tGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGAGTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TGTTTTGTTCTTTTTTATGTAAATACTAAAAAtttta                                                                                                        >  2:2014000/1‑138 (MQ=255)
                                   aTTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGCTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTGTGTGTTGTTTTGTATGTAATTACAAAAAAATTGaaa                                                                                                      >  2:2612613/1‑140 (MQ=255)
                                   aTTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTTTTTTTTATGTAATTAATAAAAAtttttaa                                                                                                      >  2:2762871/1‑136 (MQ=255)
                                    ttGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTTTTTTTTTTTTTTTATTAGTAGAAAtttttaaa                                                                                                     >  1:3238179/1‑135 (MQ=255)
                                    ttGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTGTTTTTTATTTTATTAATAAAAAATTTaaaa                                                                                                     >  1:1026484/1‑140 (MQ=255)
                                    ttGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTTTTTTTTTTTTAAATAATAAAAATATTaaaa                                                                                                     >  1:864195/1‑140 (MQ=255)
                                       gCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TGTTTTGTTCTTTGTTTTTTATTTAATAAAAATTTTAAAAAT‑a                                                                                                 >  2:3007989/1‑140 (MQ=255)
                                       gCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTTTTTTTTTTTTAATTAATAAAAAATTTTAAAAT‑a                                                                                                 >  1:262063/1‑140 (MQ=255)
                                       gCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTATTTAATTACTACAAATTTGAAAAAT‑a                                                                                                 >  2:124516/1‑140 (MQ=255)
                                         tGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTATTTTTTTTGTAATTAATACAAAATTTAAAAAT‑TCg                                                                                               >  2:284129/1‑140 (MQ=255)
                                           aaaCGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACggg                                                                                             <  2:2477018/140‑1 (MQ=255)
                                             aCGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTGTGTTTTTTATGTAATTAATACAAAATTGAAAAAT‑AAGGGaa                                                                                           >  2:1936740/1‑140 (MQ=255)
                                             aCGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑AAGGGaa                                                                                           >  2:1936489/1‑140 (MQ=255)
                                              cGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGaaa                                                                                          <  1:1488505/140‑1 (MQ=255)
                                                gCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAATCAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTATTTTTTATGTAATTACTACAAAATTTGAAAAT‑ACGGGaaaaa                                                                                        >  2:2814369/1‑140 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAc                                                                                       <  1:1731530/140‑1 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTTTATTTTTTATTTAATTAATAAAAAATTTAAAAAT‑AAGGGaaaaaa                                                                                       >  2:1157811/1‑139 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTGTTTTTTATTTAATTACTACAAAATTTAAAAAT‑AAGGGaaaaaa                                                                                       >  2:1629202/1‑139 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTATGTAATTAATACAAATTTTAAAAAT‑ACGGGAAAAAc                                                                                       >  2:3291163/1‑140 (MQ=255)
                                                 cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTATTTTTTATGTAATTAATACAAAATTTTAAAAT‑AAGGGgaaaaa                                                                                       >  2:2220473/1‑139 (MQ=255)
                                                  ttGCTTAATCGGTGCAGAGGGGGTAATTTTTTAAATTTATACCGATTGAAACAAAGAAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑a                                                                                     <  1:1373472/140‑1 (MQ=255)
                                                  ttGCTGAATCGGTGCAGAGCGGGTAAATTTTTAAATTTATACCTATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑a                                                                                     <  1:2290474/140‑1 (MQ=255)
                                                             gTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTTTTTTTTTTGTAATTACTACAAATTTTTAAAAT‑AAGGGAGAAAA‑AAACCATTTACt                                                                          >  2:1761885/1‑140 (MQ=255)
                                                               gCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTGTTTTTTCTGTAATTACTAAAACATTGAAAAAT‑AAGGGTCAAAC‑AACCCATGTAGTTc                                                                        >  2:2947470/1‑140 (MQ=255)
                                                                 agagCGGTGAAATTTTTAAATTTATACCTATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCa                                                                      <  2:895698/140‑1 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTGTTTTTTATGTAATTACTACAAATTTGGAAAAT‑ACGGGAAAAAC‑CTCCGATTTAGTTACAAAatagt                                                               >  2:674451/1‑138 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTTGTTTTTTTTTTATTTTTACAAAATTGTAAAAA‑AATGGGAAAAC‑AACACAATTAAGTACAAAataat                                                               >  1:2842540/1‑138 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTGTTTTTTTTGTAATTTCTACAAATTTGAAAAAT‑ACGGGAAAAAA‑ATACCATTTTCTTGGAAAATAtt                                                               >  2:376497/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTTTTTTATTTATAAAAAATTTAAAAAA‑AAGGGCAAAACAAACCCATTTAATGCAAAAaaat                                                                >  1:2931739/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTTTGTAATTTCTACAAATTTGTAAAAT‑AAGGGAAAAAC‑ATCCCCGTTACTTCCCAAATAtt                                                               >  2:3343361/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTTTGTAATTAATACAAATTTTAAAAAT‑AAGGGAAAAAA‑ATACCATTTAATTGCAAAAAAtt                                                               >  2:2170378/1‑140 (MQ=255)
                                                                        ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTATTTTATTAATAAAAATTTGAAAAAA‑ACGGGAAAAAA‑ATCCCAATTAATTGCAAAAAAtt                                                               >  2:404691/1‑140 (MQ=255)
                                                                              ttttAAATTTATACCTATTTAAAAAAAGTAAAACAACAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATgg                                                         <  1:984755/140‑1 (MQ=255)
                                                                              ttttAAATTTATACCGATTGAAACAACGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATgg                                                         <  1:746559/140‑1 (MQ=255)
                                                                              ttttAAATTTATACCGATTGAAAAAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATgg                                                         <  1:1647558/140‑1 (MQ=255)
                                                                                             taTTCAAACAAAGTAAAACAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                          <  1:2177062/139‑1 (MQ=255)
                                                                                             taTTCAAAAAAAGAAAAACAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                          <  1:1249872/139‑1 (MQ=255)
                                                                                             gtttcaaaCAAAGAAAAACACACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                          <  1:1771921/135‑1 (MQ=255)
                                                                                             gtttGAAACAAAGTAAAACAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                          <  2:1110450/138‑1 (MQ=255)
                                                                                             gATTGAAACAAAGAAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                          <  2:2108190/140‑1 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTTTGTTTTTTTTTTTATTAAAAAAAATTTTAAAAATAAAGGTAAAAAA‑AACCAATTTA‑ATACAAAATATTTTTTTGTAATTTTTTGtgtgtt                                         >  1:3384665/1‑135 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTTTTGTTTTTTTTTTAAATAATAAAAATTTTTAAAAA‑AAGGGAAAAAA‑AAACCATTTAAATACAAAATATTTTTTGGTAATTTTTTTTAGTTa                                         >  1:3423754/1‑140 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTGTTTTTTTTTTTATTAATAAAAAATTGAAAAAA‑ACAGGTAAAAA‑AAAACAATTAAATACAAAAAAATTTTTGGTAAATTTTTTTAGGTa                                         >  1:1132796/1‑140 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTCTTTTTTTTTTAATTACTACAAATTTTAAAAAT‑AAGGGAAAAAC‑ATACCAATTAATTAAAAAATATTTTATGTTAATTTTATTTAGGTa                                         >  2:2042962/1‑140 (MQ=255)
                                                                                              aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTATTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAAAATTTGATGGTAATTTTATGttgtga                                         >  2:3419514/1‑135 (MQ=255)
                                                                                              aTTCAAAAAAAGTAAAACAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTa                                         <  1:1169906/140‑1 (MQ=255)
                                                                                                tGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTTTTTTTTTTTTTATTAAAAAAAAATTTAAAAAAA‑AGGGGAAAAAA‑AAACC‑TTTAATTCAAAAAAAATTTATGGTAATTTTATGTATGTaaa                                       >  1:3007934/1‑140 (MQ=255)
                                                                                                  aaaCAACGAAACCCAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt                                     <  1:2762871/140‑1 (MQ=255)
                                                                                                  aaaCAAAGTAAAACAACACCGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAACAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt                                     <  2:886471/140‑1 (MQ=255)
                                                                                                    aCAAACTAAAAAAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAttt                                   <  1:495498/140‑1 (MQ=255)
                                                                                                       aactAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTa                                <  2:2515248/137‑1 (MQ=255)
                                                                                                        aGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTATTTTTTATTTAATTTATACAAATTTTTAAAAT‑ACGGGAAAAAC‑AAACCATTTAAGTACAAAAAAGTTTTTGGTAATTTTATTTTGGTTAAATgtgttt                               >  2:2148689/1‑138 (MQ=255)
                                                                                                        aGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTTTTCTTTTTTATGTAAATAATAAAAAATTGAAAAAA‑AAGGGAAAAAA‑ATCCCAATTAAATCCAAAATATTTTATTGTAAATTTATTTATGTAAAAatttttt                               >  2:8099/1‑136 (MQ=255)
                                                                                                         gTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTAtt                              <  2:2308771/140‑1 (MQ=255)
                                                                                                         caaaaaaaaaaaCGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTAtt                              <  2:3238179/138‑1 (MQ=255)
                                                                                                            acacacAAACGCCTGCCCAACCGGGCGT‑TTTTTTGTACTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAACAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:2201820/138‑1 (MQ=255)
                                                                                                            aaccAAACACGCCTGCGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:385875/137‑1 (MQ=255)
                                                                                                            aaccAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTGGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  2:487657/137‑1 (MQ=255)
                                                                                                            aaaCAACAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:1628848/140‑1 (MQ=255)
                                                                                                            aaaCAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:372203/140‑1 (MQ=255)
                                                                                                            aaaCAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  2:3418899/140‑1 (MQ=255)
                                                                                                            aaaCAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                           <  1:560981/140‑1 (MQ=255)
                                                                                                            aaaCAAAAACGCCTGGGAAACCGGGCGT‑GTTTTTGTTGTTTTTTTTGTAATTACTACAAATTTGAAAAAT‑ACGGGCAAAAC‑ATCACAATTACTTACAAAATATTTGATGGTAATTTTCTTTTGGTGAAATTTTTATTTgg                           >  2:3040432/1‑140 (MQ=255)
                                                                                                               cAAACACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCg                        <  1:2321727/140‑1 (MQ=255)
                                                                                                                    aCGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag                   <  1:3129487/140‑1 (MQ=255)
                                                                                                                    aCGCCTGGGAAACCGGGCGT‑ATTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag                   <  1:2014000/140‑1 (MQ=255)
                                                                                                                    aCGCATGGTAAACCGGGAGT‑TTTTTTGTTCTTTTTTATGTAATTACGACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag                   <  2:1805894/140‑1 (MQ=255)
                                                                                                                      gCCTGGGAAACCGGGCGT‑TTTTTTTTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  2:1196238/140‑1 (MQ=255)
                                                                                                                      gCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  2:2772188/140‑1 (MQ=255)
                                                                                                                      gCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  1:2657783/140‑1 (MQ=255)
                                                                                                                      gCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                 <  1:1796479/140‑1 (MQ=255)
                                                                                                                       ccTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAgagg                <  1:296187/140‑1 (MQ=255)
                                                                                                                                ccGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGaaaa       <  1:1240484/140‑1 (MQ=255)
                                                                                                                                ccGGGCGT‑TTATTTGTTCTTATTTATGTAATTACTACAAATTTGAAAAAG‑ACGGGAACAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGaaaa       <  2:596596/140‑1 (MQ=255)
                                                                                                                                 cGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTAATAAAAAATTTAAAAAA‑AAGGGAAAAAA‑AAACCATTTAATTCCAAAATAATTTATTGTAATTTTATGTAGGTAAAAATTTTATTTTGGCGTTAAGAGGAGGTGAAAAg      >  2:1406891/1‑140 (MQ=255)
                                                                                                                                     cGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg  <  1:2578132/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                          
ATACGAGCAACTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGT‑TTTTTTGTTCTTTTTTATGTAATTACTACAAATTTGAAAAAT‑ACGGGAAAAAC‑ATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGG  >  NZ_CP034943/2991091‑2991363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑