| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,991,262 | G→T | 24.4% | intergenic (+63/‑144) | gbsR → / → bslA | transcriptional regulator GbsR/biofilm‑surface layer protein BslA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,991,262 | 0 | G | T | 24.4% | 164.0 / 19.5 | 100 | intergenic (+63/‑144) | gbsR/bslA | transcriptional regulator GbsR/biofilm‑surface layer protein BslA |
| Reads supporting (aligned to +/- strand): ref base G (25/48); new base T (24/3); total (49/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.89e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAGGGGG > NZ_CP034943/2991127‑2991396 | ttGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAATCGCCTGGGAAACCGGGCGGTGTTTTGTTGTTGTTTTTGTGACTAATTC‑A‑AA‑TTTTaaaa > 2:3085492/1‑140 (MQ=255)ttGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGGTTGTGTTGTTTTTTTTGTTATTTCTAC‑ACAA‑GTTGaaa > 1:3468233/1‑140 (MQ=255) ggCTGAAACGCCTTGCTGAATCGGTGCACAGCGGGTAAATTTTTAAATTTATACCGATTCAAACAACCAAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAAt < 1:2120817/140‑1 (MQ=255) gCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTTTTATTACAAA‑A‑AA‑TTTTTAAAATa > 1:166935/1‑140 (MQ=255) gCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTTTTTAATTACTAA‑A‑AA‑ATTTaaaaaaa > 1:19781/1‑138 (MQ=255) cTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATTTAAATAATAA‑A‑AA‑TATTAAAAATaa > 1:825329/1‑139 (MQ=255) tGAAACGGCTTGCTGAATCGGTGCAGAGCGGGTAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTTTGTTATGACTCA‑C‑AA‑TGTGAAAtataag > 2:3605992/1‑138 (MQ=255) tGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTTTTTTTTATGTAATTAAAAA‑A‑AA‑ATTTAAAAAAACg > 1:4083360/1‑140 (MQ=255) tGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGTTAATAATAC‑A‑AA‑TTTTAAAAAAACg > 2:1416911/1‑140 (MQ=255) tGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTTTTATTAAAAC‑A‑AA‑ATTTAAAAATaag > 1:447972/1‑138 (MQ=255) aaaCGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACggg < 2:3071718/140‑1 (MQ=255) aCGGCTTGATAAATCGCTGCAGAGCGGTTAAATTTTAAAATTTATACCTATTCAAAAAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑aa < 1:3252270/140‑1 (MQ=255) aCGGATTGCTCAATCTGAGCACAGCGGTGAAATTTTTAAATTTATACCGATTTAAACAAAGAAAAACAAAAACGCCAGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑aa < 1:1463005/140‑1 (MQ=255) ggCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAACACGCCTGGTAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑aaaa < 2:4143663/140‑1 (MQ=255) gCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑aaaaa < 2:876932/140‑1 (MQ=255) tttGCTTAATATGTGCAGACCGTGTATATTTTTAAATTTATACCTATTTAAACAAAGAAAAAAAAAAACGCCTGTGAAACCGGGCTTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAAc < 2:2486697/139‑1 (MQ=255) cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAATCAAAAACGCCTGGGAAACCGGGCGTTTTGTTGTTGTTTTTTTTGTTATTAATAC‑A‑AA‑TTTTAAAAAAACGGG‑caaatc > 2:110797/1‑138 (MQ=255) cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGACACCGGGCGTGGTTTTGTTGGTTTTTTTTTTATTAATACAA‑AA‑TTTTAAAATAACGGG‑gaaaa > 1:525395/1‑140 (MQ=255) cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTGTTTTTTTGATTTTTATGTAATTACTAC‑C‑AA‑TTTGAAAAATACGGG‑aaaaaa > 2:817246/1‑139 (MQ=255) cTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTATTTTTTATGTAATTAATAC‑A‑AA‑TTTTTAAAATAAGGG‑aaaaaa > 2:1068553/1‑139 (MQ=255) ttGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTTTGTAATTAATAC‑A‑AA‑TTTGTAAAATAACGG‑AAAAACa > 2:1313092/1‑140 (MQ=255) ttGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGTAATTACTAC‑C‑AA‑TTTGAAAAATACGGG‑AAAAACa > 2:3178759/1‑140 (MQ=255) gCTTAATCGGTGAAGTGCGGGGAAATTTTTAAATTTATACCTATTTAAACAATGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATc < 2:1465433/140‑1 (MQ=255) gCTGAATCGTCGCAGCGCGGTGAAATTTATAAATCTATACCGAGAGAAACAAAGTCACCCAAACACGCCGCGGACACCGGGCGATTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATc < 2:1980151/140‑1 (MQ=255) tCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAACCCGGGCGTGGTGTTGTTGTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACCGG‑AAAAAAATCCCAttt > 2:1624505/1‑140 (MQ=255) tCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTATTTTTTTTGTAATTAATAC‑A‑AA‑ATTTAAAAATAAGGG‑AAAAACATACCAttt > 2:1624695/1‑140 (MQ=255) cAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTTTTTTTTATTTAATTTAAAA‑A‑AA‑TTTTAAAAAAAAGTG‑AAAAACAAACCaattaattaa > 2:2584791/1‑138 (MQ=255) cAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTTTTTTTTTTTTAATTACTAA‑A‑AA‑TTTGAAAAATACGGGCAAAAACTGCCCAttacttac > 2:2734099/1‑134 (MQ=255) gggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTTTGTATTTAGTAC‑A‑AA‑ATTTAAAAAAAAGGG‑GAAAAAAACCCCGTTACTTGCCaaaaat > 1:2945238/1‑138 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTTTTTAATTACTAC‑A‑AA‑TTTGTAAAATACGGG‑CAAAAAATGCCATTTAGTT‑CCAAAATAtt > 2:2733562/1‑140 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTTTTTAATTTGTAC‑A‑AA‑TTTTTAAAAAAAGGG‑GAAAAAATAACAATTAATT‑TCAAAaaatg > 1:2485035/1‑139 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGTAATTACTAA‑A‑AA‑TTTTAAAAATAAGGG‑AAAAACATACCAGTTAATT‑CCAAAATAtt > 2:968173/1‑140 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAAATACTAC‑A‑AA‑ATTGAAAAAAACGGG‑TAAAAAATGCCATTTACTT‑CCAAAattgt > 2:2433667/1‑137 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTTTTTTTTTTGTTATTAATAA‑A‑AATTTTTAAAAAAAGGGA‑AAAAAAACCCCATTTATTT‑CAaaaaatt > 1:804427/1‑137 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTGTAATTAGTAC‑C‑AA‑TTTGAAAAATAATGG‑AAAATAATGCCATTTACTT‑CCAAAATAtt > 2:3839974/1‑140 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATAAGGG‑AAAAAAATCCCAGTTACTT‑GCAAAAAAtt > 2:1671330/1‑140 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTTTTTAATTAGTAA‑A‑AA‑ATTGAAAAATACGGG‑AAAAAAAACCCATGTACTA‑GCAAAAAAtt > 2:1392834/1‑140 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTTTTTAATTAATAC‑A‑AA‑ATTTAAAAAAAAGGG‑AAAAAAAAGCCAATTACGT‑GCAAAatagt > 2:1667804/1‑138 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATTTAAATAATAC‑A‑AA‑ATTTAAAAAAAAGGG‑AAAAACATACCATTTAATT‑ACAAAAAAtt > 2:2806468/1‑140 (MQ=255) ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGGGTTTTTTGTTTTTTTTTTAATTTATAA‑A‑AA‑ATTTTAAAAAAAAGG‑AAAAAAAACACAATTAATT‑GGAAAataat > 1:2885395/1‑138 (MQ=255) taaaTTTTTAAATTTATACCGATTTAAAAAAATTAAAAAAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATAttt < 2:1820847/139‑1 (MQ=255) gAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATAttt < 2:3708105/140‑1 (MQ=255) gAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATAttt < 2:223713/140‑1 (MQ=255) ttttAAATTTATACCGATTTAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATgg < 1:1828808/140‑1 (MQ=255) ttttAAATTTATACCGATTGAAACAACGTAACACAAACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTGGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATgg < 2:3601884/140‑1 (MQ=255) ttttAAATTTATACCGATTGAAACAACGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATgg < 1:1828464/140‑1 (MQ=255) tttcacaTTGATACCCATTCAACCACAGACAAACAAACACCCCTGCGACACCGGCCGTTTTTTTGTTCATTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATgg < 1:2417057/134‑1 (MQ=255) ttatactttttTACCTATTGAAAAAACGTAAAACAAAAACGCCTGGGAAAGCGGGAGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TGTTAAAAATAATGG‑AAAAACATCCCATTTACTT‑CCCACATATTTGATgg < 2:2045467/133‑1 (MQ=255) ttATACCTATTTAAAAAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTa < 2:2300034/140‑1 (MQ=255) ttATACCGATTGAAACAAACTACAACAAACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTa < 2:323989/140‑1 (MQ=255) ataCCGATTGAAACAAAGTAAAACAAAAACGCCCGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAACACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATg < 1:3034934/140‑1 (MQ=255) ataCCGATTCAAACAAAGTAAAACAAACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATg < 1:1713623/140‑1 (MQ=255) ataCCGATTCAAACAAACTAAAACAATAACGCCTTGGAAACCGGTCGTTTTTTTGTTCTTTTTTTTTGAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AACAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATg < 1:2906400/140‑1 (MQ=255) taCCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTTTTTAATTTCTAC‑A‑AA‑ATTGAAAAATACGGG‑AAAAACATACCAGTTTCTT‑GCCAAATATTTTATTGTAATTTTTTGt > 2:3411008/1‑140 (MQ=255) taCCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTCTTGTTTTTGTAATTACTAA‑A‑AA‑TTTTAAAAAAAAGGG‑AAAAAAAAACCAATTAATT‑AAAAAAAATTTGTTTGTAATTTTTTGt > 2:3134600/1‑140 (MQ=255) aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTTTTTAATTAATAA‑A‑AA‑ATTTAAAAATAAAGG‑AAAAAAAAACCATTTAATT‑AAAAAAGAATTGATATTAAATTTTTGTAGGTa > 2:1626791/1‑140 (MQ=255) aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTATGTAATTACTAA‑A‑AA‑ATTGAAAAATAAGGG‑ACAAAAATACCAATTTCAT‑CCACAATATTTTATGGTAATATTATTTAGGTa > 2:8240/1‑140 (MQ=255) aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTATTTTTTTTGTAAATAATAA‑A‑AA‑ATTGAAAAAAAAGGG‑AAAAACAAACCCATTACTT‑CCAAAAAATTTGTTGGTAATTTTATGTTGGTa > 2:1465788/1‑140 (MQ=255) aaaaaaACTAACACAAAAACGCCTGGGACACCGGGCGTTTTTTTGTTCTTTTTTATGTAAGTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACGT‑CCAAAATAATTGATGGTAATTTTATGTAGGTAAAAt < 1:1549644/140‑1 (MQ=255) aaaCAAAGTAACACAAAAACGCCTGTGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAA‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt < 2:1422260/140‑1 (MQ=255) aaaCAAAGTAAAACAAACACGCCTGGGAAACCGCGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt < 2:2796459/140‑1 (MQ=255) aGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGGTGTTTTTTTTTTTATTAATAC‑A‑AA‑ATTTTAAAATAAGGG‑AAAAAAAAACCAATTAATT‑ACAAACTATTTTGTTGTTATTTTATGTTTTTAAAAttttttt > 1:1844047/1‑136 (MQ=255) aaacaaacACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 2:4269372/140‑1 (MQ=255) aaacaaacACGACTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 2:2763119/140‑1 (MQ=255) aaaaaaACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 1:1667804/140‑1 (MQ=255) aaaaaaACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 1:1416911/140‑1 (MQ=255) aaaCACAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAACACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 2:3468233/140‑1 (MQ=255) aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 1:1392834/140‑1 (MQ=255) aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 2:722703/140‑1 (MQ=255) aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAAGTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 2:1131545/140‑1 (MQ=255) aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTATTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 2:4221343/140‑1 (MQ=255) aaaCAAAAACGCCTGGGAAACCGCGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg < 1:565349/140‑1 (MQ=255) aaCAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTTTAATTTATAC‑A‑AA‑ATTTAAAAATAAGGG‑AAAAACAACCCAGTTAATT‑CCCAAATATTTGTTGGTAATTTTTTTTATGTTAAATTTGTAttttgg > 2:3733196/1‑137 (MQ=255) aaCAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTTTAATTAAAAC‑A‑AA‑ATTGAAAAAAAAGGG‑CAAAACAAACCATTTAAAT‑CCCAAATATTTTTTTGTTATTTTATTTAGGTTAAATTTTTAttttgg > 2:3733197/1‑137 (MQ=255) cAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTTAAAAATACGCG‑ACAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCg < 2:3622160/140‑1 (MQ=255) aaaaCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGtt < 2:4083360/140‑1 (MQ=255) aaaaCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGtt < 2:447972/140‑1 (MQ=255) aaaaCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGtt < 1:4023896/140‑1 (MQ=255) ccGCCTGGGAACCCGGGCGTTGTTTTTTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACAACCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag < 2:3602075/139‑1 (MQ=255) aCGCCTGGTAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag < 1:3411008/140‑1 (MQ=255) aCGCCTGGGAAACCGGGAGTATTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag < 1:3134600/140‑1 (MQ=255) gCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag < 1:2887856/140‑1 (MQ=255) ggCGTTTTTTTGTTGGTTTTTATGTAATTTCTTA‑A‑AA‑TTTGTAAAATAACGG‑TAAAACAACCCATTTAATT‑ACAAAATATTTTTAGGTAATTTTATGTAGGTAAAAAGTGTATTTGGGCGGTAAGAGGAAGTGAAAAGCg > 2:1070884/1‑140 (MQ=255) ggCGTTTTTTTGTTCTTTTTTAAGTAATTAATAC‑A‑AA‑ATTTAAAAATACGGG‑AAAAAAATCCCATTTTGAT‑GCAAAATATTTGATGGTTATTTTATGTATGTAAAATTTTTTTTTTGGCGTTATCTGGAGGTGTAAATCg > 2:1051112/1‑140 (MQ=255) cttttttttGTTGTTTTTTATGTAATTACTAC‑A‑AA‑TTTTAAAAATACGGG‑AAAAACATCCCATTTACTT‑ACAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg < 1:156165/138‑1 (MQ=255) tCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACAGCCCATTTACTT‑CCAAAATATGTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAat < 1:1235693/140‑1 (MQ=255) ttttttATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAatat < 2:2403552/140‑1 (MQ=255) ttACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACttt > 1:2212365/1‑140 (MQ=255) ac‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTACTTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGACTATTTTTATAACTTTTTAgg > 1:2757337/1‑140 (MQ=255) ac‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAgg < 2:4102030/140‑1 (MQ=255) ac‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAgg > 1:1081713/1‑140 (MQ=255) ac‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAgg < 2:4102179/140‑1 (MQ=255) ac‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAgg > 1:2329904/1‑140 (MQ=255) ac‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCAATTACTT‑CCAAAAGATTTGATGGTAATTTTATGTAGGTGAAATTAGTATTTGGCCGTTCAGAGGAGGGGAAAAGCGGGCAGGCCGGAATATTTTTATACCTTTTTAgg > 1:4017443/1‑140 (MQ=255) a‑aa‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATTGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAgggg < 1:1152391/140‑1 (MQ=255) a‑aa‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAgggg < 1:2733562/140‑1 (MQ=255) a‑aa‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAgggg < 1:1010919/140‑1 (MQ=255) aa‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAACTTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGACTATTTTTAGAACTTTTTAggggg > 2:141542/1‑140 (MQ=255) aa‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCGTGAATATTTTTATAACTTTTTAggggg > 2:3603701/1‑140 (MQ=255) aa‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGCCCGGCCTGAATATTTTTATACCTTTTTAggggg > 2:3770092/1‑140 (MQ=255) | TTGGCTGAAACGGCTTGCTGAATCGGTGCAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGTAATTACTAC‑A‑AA‑TTTGAAAAATACGGG‑AAAAACATCCCATTTACTT‑CCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAATATTTTTATAACTTTTTAGGGGG > NZ_CP034943/2991127‑2991396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |