| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,790,764 | T→G | 19.9% | N203H (AAC→CAC) | EO946_RS19525 ← | BglG family transcription antiterminator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,790,764 | 0 | T | G | 19.9% | 438.7 / 43.6 | 209 | N203H (AAC→CAC) | EO946_RS19525 | BglG family transcription antiterminator |
| Reads supporting (aligned to +/- strand): ref base T (23/138); new base G (46/2); total (69/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.20e-26 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 210 total aligned reads displayed.
TTTTTGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCT > NZ_CP034943/3790630‑3790893 | tttttGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCa < 2:1974253/140‑1 (MQ=255) tttGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGAtt > 1:427117/1‑140 (MQ=255) tGCAGGATATTATCCTTATATTCCGGGAAAAGATATACATAGTTTTGGGTTCTGATCAGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCAttttttt < 2:3985777/140‑1 (MQ=255) tGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGtttttttt > 2:1775991/1‑140 (MQ=255) tGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCAttttttt < 2:3243786/140‑1 (MQ=255) tGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAAatttttt > 2:1080382/1‑140 (MQ=255) tGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTGAttttttt > 1:3961006/1‑140 (MQ=255) gATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTTATTTTTTTGATGATGGCg > 1:2448133/1‑140 (MQ=255) gATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTGATTTTTTTTAgtttgggg > 1:3828001/1‑133 (MQ=255) tCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑a < 1:3648371/140‑1 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCTTTTTTCATTTTTTTGTGGATGGCGG‑AACg > 2:2531404/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACg > 2:637605/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTAAATTTTTTAGGGATGGCGG‑TACg > 2:1024354/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTGATTTTTTTGAGGATTGGGG‑CACg > 1:856666/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTGTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTAATTTTTTTCAGGATGGCGG‑aaag > 2:1900244/1‑138 (MQ=255) tatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGATTTTTTTGATGATTGGGG‑AACgg > 1:965061/1‑140 (MQ=255) atCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGTTTTTTTTGTGGATGGGGG‑GAccgg > 1:2073532/1‑137 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGAtc < 1:182263/140‑1 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGATGGGGG‑GACGggtgttg > 1:931534/1‑137 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGATGGCGG‑CACGgattttg > 1:3180585/1‑136 (MQ=255) cATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑ttt < 2:3377186/140‑1 (MQ=255) cATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑ttt < 2:680519/140‑1 (MQ=255) cATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑ttt < 2:598377/140‑1 (MQ=255) cATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑ttt < 2:626995/140‑1 (MQ=255) ttttGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGATTGCGG‑GACGGAATATATAGATTTATTAA‑ttttggaa > 2:2601417/1‑135 (MQ=255) ttGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTGAGGGTGGCGG‑TACGGATGTTCTGGATTTGTTCA‑TTTggggaaa > 2:3622319/1‑135 (MQ=255) tGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGGTGGCGG‑AACCGATGATATCAATTTATTAA‑TTTTGCaaaaa > 1:4169909/1‑139 (MQ=255) cGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCAATTTTTTAAGGGGTGGGG‑TACGGATTTTAGAGATTTGTTCAGTTTGGCaaataa > 2:2017339/1‑137 (MQ=255) gTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATc < 2:1607090/140‑1 (MQ=255) tCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAg < 1:1021730/140‑1 (MQ=255) tttACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGTTTTTTTTGAGGATGGCGG‑CACGGAGGATATCGATTTGATAT‑ATTGGGAAAATATCAGCCGTttcag > 1:1382110/1‑139 (MQ=255) ttACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTttcatt < 1:989373/140‑1 (MQ=255) ttACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTttcatt < 1:61130/140‑1 (MQ=255) aCAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTTATTTTTTTTAGGTTTGGGG‑AAAGGATTATCTGGATTTATTGA‑TTTTTAAAAATATAATCCTTttgattga > 2:2929060/1‑138 (MQ=255) cAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGAGGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAg < 2:1676304/140‑1 (MQ=255) atagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGATTTTTTTCAGGCTGGCGG‑AACGGATTATCTCGATTTATTAA‑TTTGGCAAAATATCAACCTTTTAATTAAGAAAAta > 2:3117270/1‑139 (MQ=255) atagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTTATTTTTTTAAGGCTTGGGG‑GAAGGATGATATCGATTTGTTCA‑TTTTTGGAAAAATAAGACTTTTGATTGAGAAAAta > 1:3053691/1‑139 (MQ=255) atagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTATGATGGCGG‑AACGGATGATAAAGATTTATTCA‑TTTTTGAAAATATTAACCTTTTAAATAAGaaaaaa > 2:4103912/1‑136 (MQ=255) atagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAAGGTTGGCGG‑AAAGGATTATGTATATTTGTTCG‑TTTTTCAAAAAATCAGCGGTTTCATTTAGCACAta > 1:3094592/1‑139 (MQ=255) atagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTCATTTTTTTGATGATGGCGG‑CACCGATGGTCTCGCTTTGTTCA‑TTTTGGAAAAAATCAGCCATTTAAGTCacaacaaa > 2:3796987/1‑138 (MQ=255) atagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTCATTTTTTTAATGATTGCGG‑AACGGATTTTATCGATTTGTTAA‑TTTTGGAAAAAATAAGCCATTTGTTTAAGAAAAta > 2:4042788/1‑139 (MQ=255) tatGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTGAGGATGGCGG‑AAACGATGTTGTCGATTTGTTAA‑TTTTGCAAAATATAATCCATTTAATTAAGAACATCAAtctac > 2:3638370/1‑138 (MQ=255) tGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:840413/140‑1 (MQ=255) tGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:1936334/140‑1 (MQ=255) tGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:3475243/140‑1 (MQ=255) tGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAAATTTTTTCATGATGGCGG‑AAAGGATTATATAGATTTATTAA‑TTTTGCAAAATATAACCCTTTTTATTCATAAAAACaaaaaacag > 2:3152349/1‑133 (MQ=255) gatgaGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGAATTTTTTCATGATGGCGG‑AACCGATGATCTAGATTTGATTA‑TTTGGGCAAATAAAATCCGTTTCAATAAGAAAAAAAATAGCCGTTtatc > 2:4073636/1‑140 (MQ=255) gatgaGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAAGGATGGCGG‑AACGGGTGATCTAGATTTGTTGA‑TTTGGGGAAAAATAAGCCATTTGATTAAGAACATAAAAGTCCGgttgag > 2:2380455/1‑137 (MQ=255) gaGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTCAATTTTTTCAGGTTGGCGG‑AACCGAATATCTCGCTTTATTAA‑TTTTGGAAAATATCACCCTTTTCATTCAGAACATAAATATACGTTTGTCttt > 2:4318797/1‑140 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:4103912/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:2179072/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:54614/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:431186/140‑1 (MQ=255) ttATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTGAGGGTGGGGGAAACGGA‑GTTCTAGATTTCTTCA‑ATTTGCAAAATATCAGCCGTTTCATTAAGAACAACAAACACCGTGTGACGTTCATc > 2:2077175/1‑140 (MQ=255) tATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCg < 2:1600970/140‑1 (MQ=255) tATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCg < 2:2432876/140‑1 (MQ=255) ttCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGAc < 2:3010205/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:2609598/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 1:42567/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 1:637605/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:882774/140‑1 (MQ=255) gTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGCTGGGGG‑AACGGTGTATCTAGCTTTTTTGC‑TTTTGCAATATATCAGCCTTTTGATTCAGAACAAAAATCAACGTTTGTCTTTCATCGCCAATg > 2:3935147/1‑140 (MQ=255) tCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTGAGGGTGGCGG‑GAACGATGATCTCGATTTTTTGATTTTGGCAAAA‑ATAAGCCGTTTGATTGAGAACAACAAAAGCCGGTTGTGGTTGATCGACAAAGt > 2:2693377/1‑140 (MQ=255) tCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGAATTTTTTGAGGTTTGGGG‑GACGGCTGTTATGGGTTTATTGA‑TTTTGGGAAAAATCATCCGTTTGATTTAGAAAAACAAAATCCGATTGTGTTTTATAGTCaaatt > 2:2293070/1‑137 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTGATTTTTTTGAGGGTGGCGG‑CACGGCTGATCTCGATTTCTTGA‑TTTTGGCAAATATAAGCCGTTTCATTCAGAACATCAATCGCCGTTTGGCTTTGATCGACAATGTa > 2:4273881/1‑140 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTTTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:2038276/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:3279282/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:1320018/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:2824516/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:2246379/140‑1 (MQ=255) cccAAGTTGGACAGAGGGAGGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:2306572/140‑1 (MQ=255) cccAAGAGGGACAGAGGGATGCGGTCGTTGTTCATTGTTTTCAGGATGCCGG‑AACGGATGATCTCGCTTTCTTCT‑TTTGGCACAATATCACCCCTTTCATTCAGAACATCAATCTCCGTGTCTCTTTCATCGACAATGTa < 2:3441274/140‑1 (MQ=255) accAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 2:2355531/139‑1 (MQ=255) cAATTTGGACAGATGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 2:3699091/140‑1 (MQ=255) cAAGTTGGACAGTGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATCTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 2:420706/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACACTGGACt < 2:943674/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 1:1169871/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 2:2073532/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 1:1486733/140‑1 (MQ=255) aaGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTc < 2:274066/140‑1 (MQ=255) aaGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTc < 2:1297982/140‑1 (MQ=255) aaGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTc < 1:2562139/140‑1 (MQ=255) gtgggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 2:3268054/137‑1 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:2894434/140‑1 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:1819024/140‑1 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:2601417/140‑1 (MQ=255) gTTGAACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:1130993/140‑1 (MQ=255) cAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:3210134/140‑1 (MQ=255) cAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:1928958/140‑1 (MQ=255) cAGAGGGATGCGGTCGTTTTTCATTTTTGTCCGCATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:1149389/140‑1 (MQ=255) cAGAGGGATGCGGTCGGTGTTCATTGTTTTCAGGAGGGCGG‑AACGGATGATCTCGATTTCTTCA‑CTGGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 1:3388351/140‑1 (MQ=255) agGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGt < 1:2693377/140‑1 (MQ=255) agGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGt < 1:111981/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:1152880/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:1478225/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 1:1356668/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:3086530/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:856968/140‑1 (MQ=255) agATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 1:2224378/139‑1 (MQ=255) aTGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCt < 2:1229222/140‑1 (MQ=255) | TTTTTGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGG‑AACGGATGATCTCGATTTCTTCA‑TTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCT > NZ_CP034943/3790630‑3790893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |