| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 704,348 | Δ1 bp | 100% | intergenic (+170/‑14) | EO946_RS03650 → / → EO946_RS03655 | CamS family sex pheromone protein/phosphotransferase enzyme family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 704,348 | 0 | A | . | 99.1% | 573.0 / ‑2.1 | 117 | intergenic (+170/‑14) | EO946_RS03650/EO946_RS03655 | CamS family sex pheromone protein/phosphotransferase enzyme family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (46/70); total (46/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 144 total aligned reads displayed.
GCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAGAAAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGA > NZ_CP034943/704209‑704483 | gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGCAAAAGATGTATTTTTGCTTCTGCCGAGACACAACTCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAACACAATCACTATCAAATCAATAGCaaaga > 2:446673/1‑140 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACACATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAAAAATCAATATAAAATCAATAGCaaaga > 1:176417/1‑140 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAACACAATCAATATCAAATCAATAGCcaaga > 1:1396126/1‑140 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATCTCAAATCAATCGCcaaga > 1:2171766/1‑140 (MQ=255)gCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTGTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaaga > 2:523147/1‑140 (MQ=255) cacaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaa > 1:1007700/1‑140 (MQ=255) agaaGTGTTTTTTTATGTTACCATTAACAGGAATAGGAAAAATATCTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 2:1413445/138‑2 (MQ=255) acaATGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 2:2424572/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:1937849/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 2:931718/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:2012547/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:2050847/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:2131100/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 2:1502239/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:2224724/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 2:1001917/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:849258/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:499340/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:67004/140‑2 (MQ=255) acaAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCaaagaag < 1:1131974/140‑2 (MQ=255) aGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAGAAggga < 1:878482/140‑2 (MQ=255) ggTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGt < 1:2142445/140‑1 (MQ=255) ggTATTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGt < 2:1567661/140‑1 (MQ=255) tttttATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGACAACAATCAATATCAAATCAGTAGCAAAG‑AAGGGAGTTAGa > 2:1908542/1‑140 (MQ=255) tttttATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGa < 1:83761/140‑1 (MQ=255) tttttATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGa < 1:1217236/140‑1 (MQ=255) tttttATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGa < 2:1037028/140‑1 (MQ=255) tATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTg < 2:1013834/140‑1 (MQ=255) gTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCAt > 1:667907/1‑140 (MQ=255) gTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCAt > 2:815888/1‑140 (MQ=255) ttACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATa > 2:501673/1‑140 (MQ=255) aTTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGaa < 1:2306682/140‑1 (MQ=255) gAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCaaaaa < 2:331592/140‑1 (MQ=255) aaGATGGATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCAt < 2:189246/140‑1 (MQ=255) aGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATg < 2:1117819/140‑1 (MQ=255) aGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATg < 1:1290261/140‑1 (MQ=255) aGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATg < 1:257998/140‑1 (MQ=255) aGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATg > 2:620285/1‑140 (MQ=255) aGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATg < 1:1475275/140‑1 (MQ=255) aGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATg > 2:297915/1‑140 (MQ=255) aGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATg > 2:842580/1‑140 (MQ=255) aGATGTATTTTTGCTTCTGCCCAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAAAAGCAAAG‑AAGGGATTTATACGTGCATAAAGAAAACAAAAACATATTTCATg > 2:2298114/1‑140 (MQ=255) tATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGAt > 1:1913724/1‑140 (MQ=255) ttGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGt > 1:1811372/1‑140 (MQ=255) tGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGtt < 1:835934/140‑1 (MQ=255) tCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTgg > 1:399605/1‑140 (MQ=255) cTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGc < 1:701016/140‑1 (MQ=255) acaAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 2:92778/140‑1 (MQ=255) acaAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCg < 2:1898227/140‑1 (MQ=255) gggggAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATa < 2:1201654/140‑1 (MQ=255) gggggAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATAGTGCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATa < 2:469955/140‑1 (MQ=255) ggTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGACGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGttt > 1:1142033/1‑140 (MQ=255) ggTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGttt > 1:573488/1‑140 (MQ=255) ggTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGttt > 2:1736951/1‑140 (MQ=255) gTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCaa > 1:1934368/1‑140 (MQ=255) aTGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAg > 2:1170844/1‑140 (MQ=255) gCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGcc > 1:1043575/1‑140 (MQ=255) gCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGcc > 2:1609223/1‑140 (MQ=255) gCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGGTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGcc > 2:1760853/1‑140 (MQ=255) cTGGAACTCGTGTGAACACAATCACTATCAAATCAATAGCAACG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACAGATTTCATGAAGATCAGGGTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCa < 2:1822701/140‑1 (MQ=255) ggAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCCgg > 1:2060182/1‑140 (MQ=255) ggAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAgg > 1:1547091/1‑140 (MQ=255) ggAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAgg > 1:1833989/1‑140 (MQ=255) ggAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGACAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAgg > 2:90974/1‑140 (MQ=255) aaCTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTg < 1:296679/140‑1 (MQ=255) aaCTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTg < 1:1044581/140‑1 (MQ=255) aaCTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTg < 1:1842291/140‑1 (MQ=255) aaCTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTg < 1:938488/140‑1 (MQ=255) aCTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGc < 2:683601/140‑1 (MQ=255) tgtgAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGtttt > 2:1011484/1‑140 (MQ=255) tgtgAAAACAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGGTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGtttt > 2:2211027/1‑140 (MQ=255) aCAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTg < 1:360579/140‑1 (MQ=255) aCAATCAATATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTg < 1:452803/140‑1 (MQ=255) aCAATCAATATCAAAACACTAGCAAAG‑AAGGGAGTGAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTg < 2:1396126/140‑1 (MQ=255) aCAAGCAATATCAACTCAATAGCACAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACAGATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTg < 1:2093246/140‑1 (MQ=255) tcaatATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGc > 1:730423/1‑140 (MQ=255) tcaatATCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGc > 2:1084889/1‑140 (MQ=255) tatCAAATCAATAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 2:2030060/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 1:2182634/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 1:1908670/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 1:898770/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 1:1472577/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 1:1320500/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGATGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGTTGCGGAAAACt < 2:1811372/140‑1 (MQ=255) aaatcaaTAGCAAAG‑AAGGGAGTTAGACGTGAATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 1:235051/140‑1 (MQ=255) aaaacaaTAGCAAAG‑ACGGGAGATACACGTCCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACt < 1:1908542/140‑1 (MQ=255) atcaaTAGCAAAG‑CAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATGTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGCTGCGGAAAACTAt < 2:2133668/140‑1 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGGCGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt > 1:2413097/1‑140 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt < 2:872921/140‑1 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt > 1:2076485/1‑140 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt > 1:529741/1‑140 (MQ=255) atcaaTAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTAt < 2:167173/140‑1 (MQ=255) tAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa > 1:700500/1‑129 (MQ=255) tAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 2:700500/129‑1 (MQ=255) tAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa < 2:362372/129‑1 (MQ=255) tAGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGaa > 1:362372/1‑129 (MQ=255) aGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTatat < 1:2229295/140‑1 (MQ=255) aGCAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATGTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTatat < 2:1699892/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 1:767432/140‑1 (MQ=255) cAAAG‑AAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGa < 2:2059882/140‑1 (MQ=255) | GCACAAGGGTTTTTTTATGTTACAATTAACAGGAATAGGAAAAAGATGTATTTTTGCTTCTGCCGAGACACAAATCAGGGGGAGGTATGTTGATGCTGGAACTCGTGTGAAAACAATCAATATCAAATCAATAGCAAAGAAAGGGAGTTAGACGTGCATAAAGAAATCAAAAACATATTTCATGAAGATCAGGTTTTGGCAGAGGCTGCGATGAAATACGGTTTCTCAAACAGCCAGGTGCGTTTTCTGGCTGATGCGGAAAACTATGTATATGA > NZ_CP034943/704209‑704483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |