| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 17,860 | C→T | 8.5% | N239N (AAC→AAT) | dacA → | D‑alanyl‑D‑alanine carboxypeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 17,860 | 0 | C | T | 8.5% | 394.1 / 11.8 | 147 | N239N (AAC→AAT) | dacA | D‑alanyl‑D‑alanine carboxypeptidase |
| Reads supporting (aligned to +/- strand): ref base C (93/34); new base T (3/9); total (96/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.35e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 147 total aligned reads displayed.
AGTTTCTGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTT > NZ_CP034943/17725‑17992 | aGTTTCTGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTa < 1:578016/140‑1 (MQ=255)aGTTTCTGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTa < 1:681093/140‑1 (MQ=255)aGTTTCTGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTa < 1:881864/140‑1 (MQ=255) gTTTCTGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTAt > 2:846764/1‑140 (MQ=255) tGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGa < 1:2248446/140‑1 (MQ=255) tGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGa < 1:1497461/140‑1 (MQ=255) tGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGa < 1:146288/140‑1 (MQ=255) tGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGa < 1:932104/140‑1 (MQ=255) ggCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGTAGACTTCCAGTATCGCTAAAACTAAGTTCAGAGAATGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCa > 1:389179/1‑140 (MQ=255) ggCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGACCTTTATGCTGAAAGGGCTTGTCa > 1:1901767/1‑140 (MQ=255) ggCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCa > 1:157187/1‑140 (MQ=255) ggCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCa > 1:1790928/1‑140 (MQ=255) gCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAACCGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAg < 2:1492646/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 2:191594/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 1:21133/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 2:919797/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 2:2141975/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 1:68045/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATACCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 1:1267262/140‑1 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 2:1654031/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 2:779643/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 1:2401863/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 2:2229709/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 2:1625828/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATACTGGAGACTTCCAGTATCGCCAAAACGAAATTCAGAGAAGGCACCGATG‑ATGAAATGGACATGCCGAACTGGAATTTTATGCTGAAGGGGCTTGTCAGc > 2:1626355/1‑137 (MQ=255) gCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAACACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaa > 2:2166818/1‑140 (MQ=255) gCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaa > 2:1530598/1‑140 (MQ=255) cGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaaa > 1:110464/1‑140 (MQ=255) cGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaaa > 1:47623/1‑140 (MQ=255) aTCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaaaaaa > 1:301036/1‑140 (MQ=255) aTCACTTGATTACTGACTACCATGAGATTCTGGAGACTTCCTGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGTACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTCTaaaaaa > 1:161661/1‑140 (MQ=255) cTGACTACCCTGCGATTCTGGACTCTTCAAGTATCGATAAAACCAATTTCACACAAGGCACAGATT‑ATTAAATGCACATGCCGAAGGGGAAATTTAGGCTGAAAGGGGTTGTAAGCGATTATAAAAAAGCGACTGTAGAc < 2:2258580/140‑1 (MQ=255) cTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGAc > 1:2363778/1‑140 (MQ=255) tGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACg > 2:1301218/1‑140 (MQ=255) tGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACg > 1:1657628/1‑140 (MQ=255) tGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACg > 1:692041/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGACGTTCAGAGAATGCACCGATG‑ATGAAATGGACATGCCGAACTGGCACTTTATGCTGAAAGGGCTTGTCAGCGCGTCTAAAAAAGCGACTGTAGAgggc > 1:44653/1‑139 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:153921/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:18289/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:562979/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:1157193/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:430874/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 1:1516835/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:1711910/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:186490/1‑140 (MQ=255) tACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGAtt > 2:1127903/1‑140 (MQ=255) cccTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGa > 1:1630321/1‑140 (MQ=255) cccTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGa > 1:1034691/1‑140 (MQ=255) cccTGAGATTCTGGAGACTTCCAGAATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTTTAGACGGATTGa > 1:2067918/1‑140 (MQ=255) ccTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGGACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGaa > 2:489583/1‑140 (MQ=255) ccTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGaa > 2:689099/1‑140 (MQ=255) ccTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGaa > 2:875032/1‑140 (MQ=255) tataTTCTGTATACTTCATGTATCGATAAACCCAAGTTCAGAGACGCAACACTTG‑ATGAAATGCACATGCCTAACTGTAAGTTTATGCTGAACGGGTTTGTCAGCGATTATAAAAAAGCGACTGTAGACGGATTGAAAAc < 2:157187/137‑1 (MQ=255) ttCTGGAGACTTCCATTATCGATAAACCCAAGTTCATACAA‑GCACCCGTGTAGTAAAGGCACATGCAGAACTGCAACTTTATGCTCAACGGCCTTGTCAGCGATTATAAAAAAGCGACTGTAGACGGATTGAAAACAgat < 2:111976/140‑3 (MQ=255) ttCTGCATAATTCCATTTTCGATAAACCCAAGTCCAGAGAAGGCAAATATC‑ATGAAATGGAAATGCCGAAGTGTACCTTTATGCTCACCGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGt < 2:1993026/140‑1 (MQ=255) cTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTc > 1:1005299/1‑140 (MQ=255) cTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTc > 1:1281825/1‑140 (MQ=255) cTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTc > 2:576330/1‑140 (MQ=255) cTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTc > 1:1464143/1‑140 (MQ=255) cTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTc > 1:2352134/1‑140 (MQ=255) tGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCt > 1:1893340/1‑140 (MQ=255) ttCCAGTATCGCTAAAACGAAGTTCAGAGACGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGAct > 2:188944/1‑140 (MQ=255) gTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCg > 1:1376616/1‑140 (MQ=255) gTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCg > 2:842444/1‑140 (MQ=255) gTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCg > 2:1875538/1‑140 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATg > 2:346785/1‑63 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATg < 1:346785/63‑1 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGACAGGGCTTGTCAGCGAGTAGAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTc > 2:1594540/1‑140 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTc > 1:439136/1‑140 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTc > 1:2231862/1‑140 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTc > 1:806203/1‑140 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTc > 2:1611566/1‑140 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTc > 2:494743/1‑140 (MQ=255) cTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCa > 2:1613448/1‑140 (MQ=255) acgTTCAGAGAAGGCACAGATT‑ATGACATGGAACTGCCGAACGGCACCTTTATGCTGAATGGGCTTGTCAGCTATAATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTAc < 2:2292725/138‑1 (MQ=255) aGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACa > 2:722606/1‑140 (MQ=255) ccgccacaGATG‑ATTAAATGTACATGCCGAACTGGATATTTATGCTGAAAGGGTTTTTCCGCGTGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCt < 2:245700/136‑1 (MQ=255) aaGGCACACCTC‑TTGAAATGCACATGCCGACCTGGAAGTTTATGCTCACGGGGTTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCt < 2:245742/140‑1 (MQ=255) gCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGaa > 1:2350942/1‑140 (MQ=255) gatg‑atGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCaa > 1:1034270/1‑140 (MQ=255) atgaAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGa > 1:515780/1‑140 (MQ=255) gaAATGGACATGCCGAACTGGAATTTTATGCTGAAGGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGACCAGCTGAACTCAACGGAAt > 1:2235375/1‑140 (MQ=255) aattgcaCATCCCCAACTGTAAATTTTTGCTCAACGGGTTTTTCAGCTATTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATg < 1:489583/134‑1 (MQ=255) aaaTGCACTTGCCGAACTGGAATTTTTTTCTTAAGTGGCTTGTCAGGTAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATg < 2:631070/140‑1 (MQ=255) ttttaCATGCCGAACTGTAATTTTAGGCTGATTGGGCTTGTCAGGCAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:292019/136‑1 (MQ=255) ttGGACATGCCGAACTGGAACTTTTGGCTTAACGGGGTTGTCAGCGATTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:1995988/139‑1 (MQ=255) tgggACATGCCGACCTGGAACTTTTTGCTCAACGGGGTTGTCAGCGTGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:2231862/138‑1 (MQ=255) agggACATGCCGAACTGTAACTTTCTGCTGAACGGGCTTGTCTGCTAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:301036/138‑1 (MQ=255) aTGGACTTGCCTAAGTTGATGTTTATGCTGAAAGGGATTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:1298372/140‑1 (MQ=255) tgcaCAGGCCCAACTGTAATTTTTTGCTCAACGGGTTTGTCCGCGTTTAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgt < 1:486933/137‑1 (MQ=255) ggACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgtg > 2:2230941/1‑140 (MQ=255) tccaggCCCAAGTGCAACTTTATGCTGAACGGGCTTGCCCGCTATTTAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAAGTCAACGGAATGCgtgt < 2:418880/135‑1 (MQ=255) gcccaccTGGAACTTTATGCTTAACGGGCTTGACCGCTATTAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGttatta < 2:1282935/134‑1 (MQ=255) gcccaccTGGAAATTTATGCTGAACGGGTGTGTCCGCGATTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGttatta < 1:1301218/134‑1 (MQ=255) gCCCAACTGGAATTTTTTGCTCACCGGGTTTGTCAGCGTTTAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGttatta < 2:662606/140‑1 (MQ=255) cccGACCTGCACCTTTAGGCGGAACGGGCTTGACAGGTTCAAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCCGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGttatta < 1:1157193/139‑1 (MQ=255) ccGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTAc > 2:631628/1‑140 (MQ=255) ccGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTAc > 2:1150225/1‑140 (MQ=255) gAACTTGAAATTTATGCGCACCGGGGTTGTCAGCGTTTATAAAAACGCGACTGGAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACtg < 2:2219838/140‑1 (MQ=255) aCTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACtgtt > 2:1489066/1‑140 (MQ=255) | AGTTTCTGCTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATG‑ATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTT > NZ_CP034943/17725‑17992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |