| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,601,897 | T→A | 5.2% | S37S (TCA→TCT) | EO946_RS13465 ← | penicillin‑binding protein 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,601,897 | 0 | T | A | 5.2% | 254.6 / 4.5 | 77 | S37S (TCA→TCT) | EO946_RS13465 | penicillin‑binding protein 2 |
| Reads supporting (aligned to +/- strand): ref base T (36/37); new base A (2/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
AACAACCGCAGGCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACATTGTGGACG > NZ_CP034943/2601765‑2602036 | aacaacCGCAGGCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATg > 2:388279/1‑140 (MQ=255) aacCGCAGGCTCGCTTTTGCCGGTCAGCGCCTGCCCGTGTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGAtt < 1:1721289/140‑1 (MQ=255) ccGCAGGCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCt > 1:2144015/1‑140 (MQ=255) cgggCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑a > 1:2165580/3‑140 (MQ=255) ggCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑aaa > 1:2379554/1‑140 (MQ=255) ggCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑aaa > 1:1271932/1‑140 (MQ=255) gCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCTTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑aaaa < 2:2170668/140‑1 (MQ=255) cTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑aaaaa < 1:992562/140‑1 (MQ=255) tCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑aaaaaa > 2:59461/1‑140 (MQ=255) ttttGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGc < 2:951228/140‑1 (MQ=255) ttttGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGc < 2:1339234/140‑1 (MQ=255) tttgGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGAACAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGc < 2:2431726/140‑1 (MQ=255) gTCAGCGCCTGCCCGTTTCGATCTAAAATGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTc > 1:217296/1‑140 (MQ=255) cAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCg < 1:1166737/140‑1 (MQ=255) cccGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTca > 2:614380/1‑140 (MQ=255) cccGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTca > 2:653049/1‑140 (MQ=255) cccGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTca > 2:1540053/1‑140 (MQ=255) tttCTATGTAAAAAGGAACATCTTCCGTCAGAAATGAGTACTTCCTCCGTACTCTGTTTCACGCTGTCCTGGATCAAATGGATGTTCTTTTTTGAAAGTGATTGTGT‑AAAAAACAGCTGGATTTCCGCCAACCTcagcag > 2:191830/1‑140 (MQ=255) ttCGATCTAAAAAAGAGCCTCTTCCATCTGAAATGAGCACTTCCTCCGTCCGCTGTTTCACACTTTCTTGAATCAAATTAATTTTCTTTTTAGAAAATGATTCTGT‑GAAAAACAGCTGGATTTCTGCAAGTCTCAGCAGa > 2:369265/1‑140 (MQ=255) ttCGATCTAAAAAAGAGCCTCTTCCATCTGAAATGAGCACTTCCTCCGTCCGCTGTTTCACACTTTCTTGAATCAAATTAATTTTCTTTTTAGAAAATGATTCTGT‑GAAAAACAGCTGGATTTCTGCAAGTCTCAGCAGa > 2:2031568/1‑140 (MQ=255) cGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAg < 2:898871/140‑1 (MQ=255) cGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGCATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑ACAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAg < 1:1671776/140‑1 (MQ=255) cGATCTAAAAACGAACCTCTTCCGTCAGACATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAg < 2:1455880/140‑1 (MQ=255) gATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGc < 1:2164536/140‑1 (MQ=255) aaCCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTACTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGACAAAAACg > 2:542185/1‑140 (MQ=255) ccTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGAt < 2:21069/140‑1 (MQ=255) ccTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGAt < 2:1057698/140‑1 (MQ=255) ttCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCaaa < 1:460982/140‑1 (MQ=255) ttCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCaaa < 1:1801411/140‑1 (MQ=255) gAAATTAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTTGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGTATTTCCGCCAACCTCAGCAGAAGCAGTAAAAAAACGATCAAAAAAGCAAt < 2:1668478/140‑1 (MQ=255) aGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGc > 1:343604/1‑140 (MQ=255) ttCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCt > 2:1240069/1‑140 (MQ=255) ttCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCt > 2:703845/1‑140 (MQ=255) ttCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATAAAAAAAGCAATGACTGCCAGCt > 2:374527/1‑140 (MQ=255) cctccGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCGGGTAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTc > 2:1730463/1‑140 (MQ=255) cctccGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTc > 1:2111232/1‑140 (MQ=255) cctccGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTc > 1:848948/1‑140 (MQ=255) cctccGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGATGGATTTCCGCCAACCTCAGAAGAAGCAGGCCAAAAACGATCAAAAAAGCAATGACTGCCAGCTTc > 2:1491811/1‑140 (MQ=255) tccgtccgCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCAt < 2:2111232/140‑1 (MQ=255) tccgtccgCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCAt < 2:848948/140‑1 (MQ=255) ccgtccgCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAATTGATTCTGT‑AAAAAACAGCTGGAGTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAACAGCAATGAGTGCCAGCTTCAtt > 2:52727/1‑140 (MQ=255) ccgtccgCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCCtt > 1:328794/1‑140 (MQ=255) ccgtccgCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAAAAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCAtt > 1:1543752/1‑140 (MQ=255) ccgCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGACGCAGGAAAAAAACGATCAAAAAAGCACTGACTGCCAGCTTCATTCGtg > 2:295960/1‑139 (MQ=255) ccgCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGtt > 2:1192149/1‑140 (MQ=255) tGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGTAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAAAGATCAAAAAATCAATGACTGCCAGCTTCATTCGTTTCGa > 2:1358937/1‑140 (MQ=255) tGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGa > 1:1115966/1‑140 (MQ=255) tGTTTCACGCTATCCTGGATCAAATTGATATTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAAACTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGACAGCTACAGTCTTTTAGa > 2:2178297/1‑140 (MQ=255) gTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGat < 2:1115966/140‑1 (MQ=255) cACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCt > 2:1704129/1‑140 (MQ=255) cACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCt > 2:605663/1‑140 (MQ=255) aagCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCtt < 2:1271932/138‑1 (MQ=255) aCGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCtt < 2:2379554/140‑1 (MQ=255) tCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATaaa > 1:2043746/1‑140 (MQ=255) tCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATaaa > 1:800679/1‑140 (MQ=255) gATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAac < 1:1042193/140‑1 (MQ=255) tCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAacac < 1:614380/140‑1 (MQ=255) tCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAacac < 1:1540053/140‑1 (MQ=255) tCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAacac < 1:653049/140‑1 (MQ=255) aaaTTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCt < 2:2144015/140‑1 (MQ=255) aaTTGATTTTCTTTTTTGAAAATGATTCTGTAAAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCt < 1:2269689/140‑1 (MQ=255) aaTTGATTTTCTTTTATGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACTATCAAAAAAGCAATGACTGCCAGCTTAATTCGTTTCGATATCTTAATAAAAAAACACCTc > 1:933271/1‑140 (MQ=255) aTTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGAATGCCAGCTTCATTCGTTTCGATCTCTTAATAAAAAAACAACTCa > 2:1395382/1‑140 (MQ=255) tGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCAcc < 1:407013/140‑1 (MQ=255) aaTTTTCTTTTTAGAAAATGATTCTTT‑TAAAAACAGATGGATTTCTGCAAGTCTCAGCAGAAGCAGAAAAAATACAATCAAAAAAGCGATGACTGCCAGCTTAATTCGTTTCGATATCTTCATAAAAAAACACCTCAccc < 1:369265/139‑1 (MQ=255) aaTTTTCTTTTTAGAAAATGATTCTGT‑GAAAAACAGCTGGATTTCTGCAAGTCTCAGCAGAAGCAGAAAAAATACAATCAAAAACGCGATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCAccc < 1:2031568/139‑1 (MQ=255) aTTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCca < 1:605663/140‑1 (MQ=255) aTTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCca < 1:1704129/140‑1 (MQ=255) aTTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCca < 1:1419259/140‑1 (MQ=255) ttCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACAt < 2:800679/140‑1 (MQ=255) ttCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACAt < 2:2043746/140‑1 (MQ=255) cTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGc > 2:1028489/1‑58 (MQ=255) cTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGc < 1:1028489/58‑1 (MQ=255) cTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGc < 1:2065958/58‑1 (MQ=255) cTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGc > 2:2065958/1‑58 (MQ=255) cTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACATtg < 1:392769/140‑1 (MQ=255) cTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACATtg < 1:362998/140‑1 (MQ=255) tttGACAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACATTGTGGa < 1:2423910/140‑1 (MQ=255) tGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACATTGTGGACg < 1:901160/140‑1 (MQ=255) tGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACATTGTGGACg < 1:954815/140‑1 (MQ=255) | AACAACCGCAGGCTCGCTTTTGCCGGTCAGCGCCTGCCCGTTTCGATCTAAAAAGGAACCTCTTCCGTCAGAAATGAGTACTTCCTCCGTCCGCTGTTTCACGCTTTCCTGGATCAAATTGATTTTCTTTTTTGAAAATGATTCTGT‑AAAAAACAGCTGGATTTCCGCCAACCTCAGCAGAAGCAGGAAAAAAACGATCAAAAAAGCAATGACTGCCAGCTTCATTCGTTTCGATATCTTCATAAAAAAACACCTCACCCACATTGTGGACG > NZ_CP034943/2601765‑2602036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |