| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,939,941 | C→T | 5.1% | L144L (CTG→CTA) | EO946_RS15145 ← | DNA starvation/stationary phase protection protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,939,941 | 0 | C | T | 5.1% | 317.9 / 2.9 | 101 | L144L (CTG→CTA) | EO946_RS15145 | DNA starvation/stationary phase protection protein |
| Reads supporting (aligned to +/- strand): ref base C (44/49); new base T (3/2); total (49/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
ATATTCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGATTGTGAAAT > NZ_CP034943/2939805‑2940077 | atatTCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAgg < 1:146688/140‑1 (MQ=255) ttCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTCTTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTaa > 2:967947/1‑140 (MQ=255) ttCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAATTCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTaa > 2:101684/1‑140 (MQ=255) ttCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTaa > 2:2253060/1‑140 (MQ=255) ttCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTaa > 2:2252854/1‑140 (MQ=255) ttCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTaa > 1:760249/1‑140 (MQ=255) ttCTAGGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTaa > 1:1465626/1‑140 (MQ=255) gtCTATGGAAAACACGCCGAACCGATTGGAGTTTTCCGAAAAATGGACTGGTGGTCGCCTATGTATTCGGATGTAACATCAAAAGCCGGACGTCTTTTATACGCCCTCCGGCCTTTCT‑TTTTTGGAGTTAACGCAGGTac > 2:1511462/2‑139 (MQ=255) tATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCt > 1:896747/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGCTGTAAAATCAAAAGCCGGACTTCTTTTATAAGACATCCGGCCTTTCT‑GTTTTGGACTTAACCCACGTAAGCttt > 2:1092256/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAATGCCGGACGTCTTTTATAAGACATCGGGCCTTTCT‑TGTTTGGACTTAACCCAGGTAAGCttt > 1:2070027/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCttt > 1:1001020/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCttt > 1:1039381/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCttt > 2:142920/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCttt > 1:2354241/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCttt > 1:2138487/1‑140 (MQ=255) tGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCttt > 1:983665/1‑140 (MQ=255) gAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCa < 2:740524/140‑1 (MQ=255) aaaaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAg > 1:88413/1‑140 (MQ=255) aaCAATCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTACAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCa > 2:1085483/1‑140 (MQ=255) aaCAAGCCGAAGGGATTGGATTTTTCAGAACATTGGACTGCTTGTCGCCTATTTTTTCGGGTGTAAAATCAATAGCCGGACGTCTTGTATAAGACATCCGGCGTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCa > 2:1617601/1‑140 (MQ=255) aaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTGT‑TTTTTGGACTTAACCCAGGGAAGCTTTCAGCa > 2:1589889/1‑140 (MQ=255) aaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCa > 2:517357/1‑140 (MQ=255) aaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCa > 2:1141840/1‑140 (MQ=255) aaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCAAGGTAATCTTTCAGCa > 2:2237734/1‑140 (MQ=255) aaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTA‑TTTTTCAGATACAAAAAGAAAAGCCGGACGTCTTTTTTAAGACATCCGGCCGTTGTATTTTTTAACTTAACCTAGGTAAGCttttatca > 1:1593396/1‑135 (MQ=255) aaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTA‑TTTTTCAGATACAAAAAGAAAAGCCGGACGTCTTTTTTAAGACATCCGGCCGTTCTATTTTTGAACTTAACCTAGGTAAGCTTTTAGCa > 1:1789910/1‑140 (MQ=255) aaCAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTA‑TTTTTCAGATACAAAAAGAAAAGCCGGACGTCTTTTTTAAGACATCCGGCCGTTCTATTTTTGAACTTAACCTAGGTAAGATTTTAGCa > 1:788699/1‑140 (MQ=255) gCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAg < 1:1756137/140‑1 (MQ=255) gCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAg < 1:2280731/140‑1 (MQ=255) aCGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCCGTtgtg > 1:1281832/1‑140 (MQ=255) aCGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTtgtg > 1:38704/1‑140 (MQ=255) aCGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTtgtg > 1:124180/1‑140 (MQ=255) ttCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATAttt > 2:748169/1‑140 (MQ=255) ttCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATAttt > 1:1210606/1‑140 (MQ=255) aGAATAATGGACTGTTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCCTACGTCTTTTTTAAGAGATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGa < 2:1332305/140‑1 (MQ=255) aGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGa > 2:2116062/1‑140 (MQ=255) aaTGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGAt < 2:88413/140‑1 (MQ=255) ggACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGc < 2:1738374/140‑1 (MQ=255) ccTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACTTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGCTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCaa < 2:575289/139‑1 (MQ=255) aCTGGTTGTCTCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTATTTTATAAGACATCGTGCCTTTCT‑TTTTTGGACTTTACCCAGGTAAGCTTTCAGCATCGAGTTGTGTTTTTCAATATTTTGATGGATCGCaa < 2:1159541/140‑1 (MQ=255) tGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCaaga < 1:536223/140‑1 (MQ=255) ttGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGc < 2:1210606/140‑1 (MQ=255) gTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCAt < 2:950412/140‑1 (MQ=255) gTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCAt < 2:1315621/140‑1 (MQ=255) gTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATAGATCGCAAGAAGCAt < 2:1843174/140‑1 (MQ=255) gTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATAGATCGCAAGAAGCAt < 2:1843183/140‑1 (MQ=255) gcatATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTACAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGAACGCAAGAAGCATGTc < 2:608703/137‑1 (MQ=255) gCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTc > 1:520100/1‑140 (MQ=255) cttttttttCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTccc < 1:727190/137‑1 (MQ=255) cTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTccc < 1:2080028/140‑1 (MQ=255) tttCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCtgttg < 2:977241/140‑1 (MQ=255) aTGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGt < 1:917327/140‑1 (MQ=255) gTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCa < 1:1160959/140‑1 (MQ=255) gTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCa < 1:520774/140‑1 (MQ=255) aaaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtca < 1:868541/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCTCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 2:1465626/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 1:1496129/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 2:830958/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 2:896747/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 1:948058/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 1:804345/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 1:748169/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 1:745843/140‑1 (MQ=255) aaGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTtcat < 2:124180/140‑1 (MQ=255) cGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGc < 1:666628/140‑1 (MQ=255) cGGACGTATTTTATAAGACAGCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGATTTTCAATATTTTGATGGATCGGAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATAAGc < 1:1221772/140‑1 (MQ=255) taAGACATCCGGCCTTTCT‑TTTTTGTACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGTTGGATCGCAAGAAGCATTTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCg < 2:290718/140‑1 (MQ=255) taAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCg < 2:290694/140‑1 (MQ=255) taAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCg < 2:2242560/140‑1 (MQ=255) cATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGttttt > 1:1902302/1‑140 (MQ=255) cATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGttttt > 2:1384474/1‑140 (MQ=255) cATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGttttt > 2:783972/1‑140 (MQ=255) cATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTGCATCAGCTAAATCCATGCCgttgtt > 2:2022736/1‑140 (MQ=255) cATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATAGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATACATGCCGttttt > 2:1383510/1‑140 (MQ=255) ccGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGAc < 1:633319/110‑1 (MQ=255) ccGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGAc > 2:633319/1‑110 (MQ=255) ccGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCTTTTTTCAg > 2:1391993/1‑140 (MQ=255) ccGGCCTTTCT‑TTTTTGGACTTAACCAATGTAAGCTTTCAGCATCCACTTGTGTTTTTCAATATTTTGATGGATAGCAAGAAGCATGTCCCCTCTTGTTTCGTCACCGACTTCATCAGATAAATCCAGTACGTTATTCAg > 2:1389882/1‑140 (MQ=255) ggCCTTTCT‑TTTTTGGGCTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGct < 2:493466/140‑1 (MQ=255) ggCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGct < 1:703057/140‑1 (MQ=255) ggCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGct < 1:686414/140‑1 (MQ=255) ggCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGct < 1:1661732/140‑1 (MQ=255) ggCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGct < 1:2149777/140‑1 (MQ=255) ttct‑ttTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTCAATCCATGACGTTTTTCATCTCTTcc > 2:2121907/1‑140 (MQ=255) ttct‑ttTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTcc > 2:2147359/1‑140 (MQ=255) ttct‑ttTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGACGTTTTTCATCTCTTcc > 2:2122896/1‑140 (MQ=255) tttttGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCaa > 2:302675/1‑140 (MQ=255) tttttGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCaa > 2:302599/1‑140 (MQ=255) tttttGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCaa > 2:793861/1‑140 (MQ=255) ttGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGa < 2:923080/140‑1 (MQ=255) ttGGAATTAACCCAGGTAATCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGa < 2:1087569/140‑1 (MQ=255) aaCCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATGAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGATTGTGaaa < 1:60007/140‑1 (MQ=255) aaCCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGATTGTGaaa > 2:178554/1‑140 (MQ=255) aaCCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGATTGTGaaa > 2:1001225/1‑140 (MQ=255) aCCTAGGTAAGCTTTTAGCATCCAGTTATGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCGATGACTGTGAAat < 2:788699/140‑1 (MQ=255) aCCTAGGTAAGCTTTTAGCATCCAGTTATGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCGATGACTGTGAAat < 2:1593396/140‑1 (MQ=255) aCCGAGGTAAGCTTTTAGCATCCAGTTATGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCGATGACTGTGAAat < 2:1789910/140‑1 (MQ=255) aCCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGATTGTGAAat < 1:1393664/140‑1 (MQ=255) aCCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGATTGTGAAat < 1:1708822/140‑1 (MQ=255) | ATATTCTATGGAAAACAAGCCGAACGGATTGGATTTTTCAGAAAAATGGACTGGTTGTCGCCTATTTTTTCGGATGTAAAATCAAAAGCCGGACGTCTTTTATAAGACATCCGGCCTTTCT‑TTTTTGGACTTAACCCAGGTAAGCTTTCAGCATCCAGTTGTGTTTTTCAATATTTTGATGGATCGCAAGAAGCATGTCCCCTGTTGTTTCGTCACCGACTTCATCAGCTAAATCCATGCCGTTTTTCAGCTCTTCCGCAATGATTGTGAAAT > NZ_CP034943/2939805‑2940077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |