| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,180,581 | T→C | 6.4% | intergenic (‑63/‑112) | EO946_RS16450 ← / → EO946_RS16455 | 3‑hydroxyacyl‑CoA dehydrogenase/enoyl‑CoA hydratase family protein/YuzL family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,180,581 | 0 | T | C | 6.4% | 290.2 / 7.7 | 93 | intergenic (‑63/‑112) | EO946_RS16450/EO946_RS16455 | 3‑hydroxyacyl‑CoA dehydrogenase/enoyl‑CoA hydratase family protein/YuzL family protein |
| Reads supporting (aligned to +/- strand): ref base T (51/36); new base C (3/3); total (54/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GCCGCAATCCCGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTT > NZ_CP034943/3180454‑3180720 | gccgcAATCCCGGAACCCATTACCCCCGATCCTACAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCttt < 2:681377/140‑1 (MQ=255)gccgcAATCCCGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCttt < 2:957230/140‑1 (MQ=255)gccgcAATCCCGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCttt < 2:933942/140‑1 (MQ=255)gccgcAATCCCGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCttt < 2:681683/140‑1 (MQ=255)gccgcAATCCCGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCttt < 2:361931/140‑1 (MQ=255) cgcAATCCCGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCa > 1:2400326/1‑140 (MQ=255) cGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTaaaa < 1:287917/140‑1 (MQ=255) gAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGa > 2:1223777/1‑140 (MQ=255) ttACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCgg > 2:30701/1‑140 (MQ=255) ttACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCgg > 2:1577543/1‑140 (MQ=255) tACCCCCGATCCTAAAACGGCTGCCGTCCGAATGTGTTTGTGCATGAGATAACCCCCTTGAACATTGAATGAATAGACATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGt < 1:1952606/140‑1 (MQ=255) cccccGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTcc < 1:836158/140‑1 (MQ=255) cccGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGa < 1:1938842/140‑1 (MQ=255) ccGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGAc < 2:8039/140‑1 (MQ=255) cGATCCTAAAACGGCTGCCTTCCGACTGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCAGGTTAAAAGATGTCCGGTCCGACt > 2:2221037/1‑140 (MQ=255) cGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACt > 1:2093840/1‑140 (MQ=255) cGAACCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTATTTCATCTTAAAATATGTCCGGTCCGACt > 2:2039892/1‑140 (MQ=255) aTCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCGCCTTGAACATTGAATGAATCGTCTTTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTc > 2:2390610/1‑140 (MQ=255) aTCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACtt > 1:1624140/1‑140 (MQ=255) aTCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTc > 1:821493/1‑140 (MQ=255) aTCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTc > 1:798572/1‑140 (MQ=255) aTCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTc > 1:303157/1‑140 (MQ=255) aTCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTc > 2:2082806/1‑140 (MQ=255) aTCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTAGACC‑AAAAAAAAAGAAAATCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTc > 2:1738982/1‑140 (MQ=255) aTCCTAAAAAGGCTGCATTCATAAAGAGTAAGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGACATTAAATTTTTGACC‑AAAAAAAATAAAACTCGTATCTTATTTCATCATAAAAGATTTCCGTTCAGAcata > 2:573156/1‑137 (MQ=255) gcTAAAACGGCTGCCTTCCGAATGTGTGTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTaaa < 2:1136474/139‑1 (MQ=255) tGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTg > 1:563555/1‑140 (MQ=255) gCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGt > 1:1390784/1‑140 (MQ=255) ccTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGtt > 1:1450600/1‑140 (MQ=255) tttGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATg < 1:1223777/140‑1 (MQ=255) tttGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATg < 2:1326984/140‑1 (MQ=255) tttGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATg < 2:450215/140‑1 (MQ=255) tttGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATg < 2:618755/140‑1 (MQ=255) tttGTGCATGAGATATCCCCCTTGAACATTGAATGAAGAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATg < 2:326376/140‑1 (MQ=255) tgtgttCATGAGATATCCCCCTTGAACATGGAATGAATAGTCAGTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATg < 2:1357526/138‑1 (MQ=255) cATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATCGCTAATTTGTTA‑TTTTTTTGTATGAAGCtt > 2:1706580/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTCATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:419960/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGTAGCTCATAAAAGa > 1:2421070/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:2203555/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:1565589/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:1151935/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCGTATAAAAGa > 2:256985/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGATA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:656733/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGATAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:151933/1‑140 (MQ=255) atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAAGAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:1274220/1‑140 (MQ=255) cccTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAACAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACggg < 2:892313/140‑1 (MQ=255) cccTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACggg < 1:43521/140‑1 (MQ=255) ttGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGaaa > 2:184840/1‑140 (MQ=255) ttGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCaa > 2:2240833/1‑140 (MQ=255) ttGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCaa > 2:20278/1‑140 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAg > 2:161192/1‑95 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAg < 1:161192/95‑1 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTTTATGAAGATTATAAAAGACGGGCAAc > 1:2062759/1‑140 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAATCTTATAAAATACGGGCGAc > 2:1418954/1‑140 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAATACggcaacg > 2:1578110/1‑135 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAAc > 2:225271/1‑140 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAAc > 2:934484/1‑140 (MQ=255) aCATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTa < 2:2400326/140‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACT‑AAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg < 1:1771849/129‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACT‑AAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg > 2:254429/1‑129 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACT‑AAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg > 2:499511/1‑129 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACT‑AAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg < 1:254429/129‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACT‑AAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg < 1:499511/129‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACT‑AAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg > 2:1771849/1‑129 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGcc > 1:2208306/1‑140 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGcc > 1:2348239/1‑140 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTGTCATCTTAAAAGATATCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGcc > 2:1431403/1‑140 (MQ=255) aatgaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:1179858/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:329861/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:1326975/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:1352692/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:682080/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg > 1:1818382/1‑140 (MQ=255) gaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAg < 1:1227735/140‑1 (MQ=255) gaatAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAg < 1:303383/140‑1 (MQ=255) gaatACTCATTCATTGTTAGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTCTAAAAGACGGGCAACTTAAGCCCGGAg < 2:987005/140‑1 (MQ=255) gaagcgTCCTTCATCTTTTGACC‑AAAAAAAATGACACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGTTCCGACTTCAATACCTACTTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAg < 2:1827505/135‑1 (MQ=255) atAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTCTGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGt < 1:950569/140‑1 (MQ=255) atAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGt < 2:2093840/140‑1 (MQ=255) aGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGa < 2:265409/140‑1 (MQ=255) aGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGa < 2:2016499/140‑1 (MQ=255) gTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGaa > 2:1856592/1‑140 (MQ=255) gTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTAGGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGaa < 2:65852/140‑1 (MQ=255) cattcattTTTTGACC‑AAAAAAAATGAAACTCGTTTGTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:1783199/1‑140 (MQ=255) cattcattTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTGCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:2315879/1‑140 (MQ=255) cattcattTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTACTTTGTTA‑TTTTTTTGTATGTAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:2427286/1‑140 (MQ=255) cattcattTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGTATCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:1784506/1‑140 (MQ=255) cattcattTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:68099/1‑140 (MQ=255) cattcattTTTTGACA‑AAAAAAAATGAAACTAGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAATCCCGGAGGTGAAgg > 2:1581278/1‑140 (MQ=255) attcattTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTATTTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 1:2214129/1‑140 (MQ=255) tcattTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGaa < 1:2377311/140‑1 (MQ=255) tttGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGACTGGTGc > 1:2122890/1‑140 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:428793/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:877626/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:918684/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 2:1390784/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:966299/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGGCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:995584/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGAGTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 2:972963/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTAAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:1577283/140‑1 (MQ=255) | GCCGCAATCCCGGAACCCATTACCCCCGATCCTAAAACGGCTGCCTTCCGAATGTGTTTGTGCATGAGATATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACC‑AAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTT > NZ_CP034943/3180454‑3180720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |