| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,180,663 | A→T | 6.0% | intergenic (‑145/‑30) | EO946_RS16450 ← / → EO946_RS16455 | 3‑hydroxyacyl‑CoA dehydrogenase/enoyl‑CoA hydratase family protein/YuzL family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,180,663 | 0 | A | T | 6.0% | 326.0 / 10.3 | 100 | intergenic (‑145/‑30) | EO946_RS16450/EO946_RS16455 | 3‑hydroxyacyl‑CoA dehydrogenase/enoyl‑CoA hydratase family protein/YuzL family protein |
| Reads supporting (aligned to +/- strand): ref base A (34/60); new base T (3/3); total (37/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
ATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCAAAA > NZ_CP034943/3180524‑3180802 | atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTCATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:419960/1‑140 (MQ=255)atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGTAGCTCATAAAAGa > 1:2421070/1‑140 (MQ=255)atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:1151935/1‑140 (MQ=255)atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:1565589/1‑140 (MQ=255)atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:2203555/1‑140 (MQ=255)atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGATA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:656733/1‑140 (MQ=255)atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGATAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:151933/1‑140 (MQ=255)atCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAAGAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGa > 2:1274220/1‑140 (MQ=255) cccTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAACAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACggg < 2:892313/140‑1 (MQ=255) cccTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACggg < 1:43521/140‑1 (MQ=255) ttGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCaa > 2:2240833/1‑140 (MQ=255) ttGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCaa > 2:20278/1‑140 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAATCTTATAAAATACGGGCGAc > 2:1418954/1‑140 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAATACggcaacg > 2:1578110/1‑135 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAAc > 2:934484/1‑140 (MQ=255) tGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAAc > 2:225271/1‑140 (MQ=255) aCATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTa < 2:2400326/140‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACTAAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg < 1:1771849/129‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACTAAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg < 1:499511/129‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACTAAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg > 2:254429/1‑129 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACTAAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg < 1:254429/129‑1 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACTAAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg > 2:499511/1‑129 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACTAAAAAAAATGAAACCCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTTCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCCTATAAAAGTCggg > 2:1771849/1‑129 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGcc > 1:2348239/1‑140 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGcc > 1:2208306/1‑140 (MQ=255) tgaatgaaTAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTGTCATCTTAAAAGATATCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGcc > 2:1431403/1‑140 (MQ=255) aatgaatAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:1352692/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:1179858/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg < 1:682080/140‑1 (MQ=255) aatgaatAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCg > 1:1818382/1‑140 (MQ=255) gaatAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAg < 1:1227735/140‑1 (MQ=255) gaatAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAg < 1:303383/140‑1 (MQ=255) gaatACTCATTCATTGTTAGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTCTAAAAGACGGGCAACTTAAGCCCGGAg < 2:987005/140‑1 (MQ=255) gaagcgTCCTTCATCTTTTGACCAAAAAAAATGACACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGTTCCGACTTCAATACCTACTTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAg < 2:1827505/135‑1 (MQ=255) atAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTCTGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGt < 1:950569/140‑1 (MQ=255) atAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGt < 2:2093840/140‑1 (MQ=255) aGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGa < 2:265409/140‑1 (MQ=255) aGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGa < 2:2016499/140‑1 (MQ=255) gTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGaa > 2:1856592/1‑140 (MQ=255) gTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTAGGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGaa < 2:65852/140‑1 (MQ=255) cattcattTTTTGACCAAAAAAAATGAAACTCGTTTGTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:1783199/1‑140 (MQ=255) cattcattTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTGCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:2315879/1‑140 (MQ=255) cattcattTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTACTTTGTTA‑TTTTTTTGTATGTAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:2427286/1‑140 (MQ=255) cattcattTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGTATCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 2:1784506/1‑140 (MQ=255) cattcattTTTTGACAAAAAAAAATGAAACTAGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAATCCCGGAGGTGAAgg > 2:1581278/1‑140 (MQ=255) attcattTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTATTTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAgg > 1:2214129/1‑140 (MQ=255) tttGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGACTGGTGc > 1:2122890/1‑140 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:966299/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:918684/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:428793/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGATTTCCGGGCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:995584/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTTAAAAGAGTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 2:972963/140‑1 (MQ=255) tCGTTTCTTCTTTCATCTAAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCtt < 1:1577283/140‑1 (MQ=255) tcttctTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAgcg < 2:563604/140‑1 (MQ=255) tcttctTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAgcg < 1:1097894/140‑1 (MQ=255) tcttctTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAgcg < 2:1527261/140‑1 (MQ=255) tcttctTTCATCTTAAAAGATTTCCGGGCCGACTTCAATAGCTAATTGGTTA‑TTTTTTTGTATGCAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAgcg < 2:588693/140‑1 (MQ=255) ttcttTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCa > 2:334914/1‑140 (MQ=255) ttcttTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCa > 2:1209649/1‑140 (MQ=255) aaacGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTATTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCgcggc < 1:1872235/140‑1 (MQ=255) aaaaGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCgcggc < 2:1779905/140‑1 (MQ=255) acaGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTGCAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCgcggcg < 1:616255/138‑1 (MQ=255) aaaGATTTCCTGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCgcggcg < 1:2036008/140‑1 (MQ=255) aaaGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCgcggcg < 1:2149972/140‑1 (MQ=255) aaaGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCgcggcg < 2:880676/140‑1 (MQ=255) aaaGATTTCCGGTCCGACTTCAATAGCTAATTTGTGA‑GTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCgcggcg < 2:1004196/140‑1 (MQ=255) ttCCGGTCCGACTTCAATAGCTAATTTTTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAACAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTa < 2:598117/140‑1 (MQ=255) ttCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAATACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTa > 1:690749/1‑140 (MQ=255) ttCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTa < 1:1577543/140‑1 (MQ=255) ttCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTa < 2:905495/140‑1 (MQ=255) ttCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTa < 1:30701/140‑1 (MQ=255) ttCCGGTCCGACTTCAATAGCTAATTGGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTa < 2:249281/140‑1 (MQ=255) tCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCCGCGCGGCGAGCGTaa < 1:1209649/140‑1 (MQ=255) tCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTaa < 1:334914/140‑1 (MQ=255) gTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAggg < 2:2348239/140‑1 (MQ=255) cTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGc < 1:1126021/140‑1 (MQ=255) cTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGc < 2:724604/140‑1 (MQ=255) cTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAACCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGc < 1:1588317/140‑1 (MQ=255) cTTCAATAGCTAATTTGTTA‑TTTTTTTGTAAGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGc < 1:274681/140‑1 (MQ=255) cTAATTTGTTATTTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGa < 2:2214129/140‑1 (MQ=255) cTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCTGCGAGCGTAAATGGAGATGCCGGTCCGAc > 2:2422682/1‑140 (MQ=255) cTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGAc < 2:798572/140‑1 (MQ=255) cTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGAc < 2:821493/140‑1 (MQ=255) cTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGAc > 2:316515/1‑140 (MQ=255) cTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGAc > 2:119527/1‑140 (MQ=255) cTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGAc < 2:1624140/140‑1 (MQ=255) tAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCCACTTAAGCCCGGCGGTGAAGGGAATGGTGCGTGAGAAAAAATATCCGTCTTCAGCGCACGTCAGCGCGGCGGGCGTCAAGGGAGCTGCCGGGCCgccg > 1:1348080/1‑137 (MQ=255) tAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTCAAGGGAGATGCCGGTCCGACt > 1:1348109/1‑140 (MQ=255) a‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTAc > 2:8648/1‑140 (MQ=255) a‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTAc > 2:157026/1‑140 (MQ=255) ataAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGAt < 2:1437198/100‑1 (MQ=255) aaaGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTc < 1:843240/140‑1 (MQ=255) aaaGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTc < 1:137332/140‑1 (MQ=255) aCGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCaaaa > 1:1422249/1‑140 (MQ=255) aCGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCaaaa > 1:1462683/1‑140 (MQ=255) aCGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCaaaa > 1:1464701/1‑140 (MQ=255) aCGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCaaaa > 2:1147174/1‑140 (MQ=255) aCGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCaaaa > 1:1750654/1‑140 (MQ=255) aCGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCaaaa > 1:414584/1‑140 (MQ=255) aCGGGCAACTTAAGCCCGGAGGGTACGGGAATGGTGCGCGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGGCTCAGCATTCCGGCGGCGGAAAACGGACAAGTCcaaa > 1:554089/1‑140 (MQ=255) | ATCCCCCTTGAACATTGAATGAATAGTCATTCATTTTTTGACCAAAAAAAATGAAACTCGTTTCTTCTTTCATCTTAAAAGATTTCCGGTCCGACTTCAATAGCTAATTTGTTA‑TTTTTTTGTATGAAGCTTATAAAAGACGGGCAACTTAAGCCCGGAGGTGAAGGGAATGGTGCGAGAGAAAAAAAATCCGTCTTCAGCGCAAGTCAGCGCGGCGAGCGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGACAAGTCAAAA > NZ_CP034943/3180524‑3180802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |