| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,523,109 | T→C | 5.9% | K138R (AAG→AGG) | EO946_RS18120 ← | CotH kinase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,523,109 | 0 | T | C | 5.9% | 373.5 / 8.2 | 117 | K138R (AAG→AGG) | EO946_RS18120 | CotH kinase family protein |
| Reads supporting (aligned to +/- strand): ref base T (61/49); new base C (3/4); total (64/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CTTCCTCAGTCCCAGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGAAAAAATCCAAT > NZ_CP034943/3522978‑3523237 | cgtCCTCAGTCCCAGTCTTCTTTTCATCTCCACGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TGTTTCGCt < 1:2349083/138‑1 (MQ=255)cTTCCTCAGTCCCAGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCt < 1:357849/140‑1 (MQ=255)cTTCCTCAGTCCCAGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCt < 1:837519/140‑1 (MQ=255)cTTCCTCAGTCCCAGTCGTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCt < 1:674632/140‑1 (MQ=255) cAGTCCCAGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCtaaataa < 2:87344/140‑1 (MQ=255) tCCCAGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTCAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAAt > 2:1520952/1‑140 (MQ=255) tCCCAGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATACAAt > 1:1701965/1‑140 (MQ=255) tCCCAGTCTTCTTTTCATATACAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAAt > 1:1342353/1‑140 (MQ=255) aGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAACTTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCag > 2:334315/1‑139 (MQ=255) cttTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACgg > 2:1052435/1‑140 (MQ=255) cttTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACgg > 2:1601746/1‑140 (MQ=255) cttTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACgg > 2:1381907/1‑140 (MQ=255) cttTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACgg > 1:69351/1‑140 (MQ=255) tCATATCCAAGCTCACGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttc < 1:1548934/140‑1 (MQ=255) tCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCTGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttc < 1:320499/140‑1 (MQ=255) tCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttc < 1:1542835/140‑1 (MQ=255) atatCCAAGCTCACGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAtgcaa > 1:2061324/1‑140 (MQ=255) atCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagt > 2:1171700/1‑140 (MQ=255) atCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagt > 1:884644/1‑140 (MQ=255) atCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagt > 1:1956934/1‑140 (MQ=255) tCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagtt < 2:334939/140‑1 (MQ=255) tCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagtt < 1:1132739/140‑1 (MQ=255) tCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagtt < 2:6553/140‑1 (MQ=255) tCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagtt < 2:453403/140‑1 (MQ=255) tCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagtt < 1:923951/140‑1 (MQ=255) tCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagtt < 1:18737/140‑1 (MQ=255) tCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagtt < 2:453205/140‑1 (MQ=255) aGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagttcaag > 1:897972/1‑140 (MQ=255) aGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGAttcaagttcaag > 1:1594134/1‑140 (MQ=255) aaGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa < 1:186439/140‑1 (MQ=255) aaGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa < 2:1345494/140‑1 (MQ=255) aaGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa < 2:2208216/140‑1 (MQ=255) aaGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTA‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa < 1:1116979/140‑1 (MQ=255) aaGCGACGTATTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCACCCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa < 1:1981455/140‑1 (MQ=255) aGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAAc > 2:1838639/1‑140 (MQ=255) aGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAAc > 2:466121/1‑140 (MQ=255) cGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCtt > 1:1885348/1‑140 (MQ=255) gTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGACATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTc > 1:1358020/1‑140 (MQ=255) tCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTCTTTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa < 2:1153019/133‑1 (MQ=255) tCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTCTTTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa > 1:1153019/1‑133 (MQ=255) tCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATaaa < 2:543600/132‑1 (MQ=255) cGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCAttct < 2:1012001/140‑1 (MQ=255) cGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCAttct > 2:1700095/1‑140 (MQ=255) ctgtCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCAtt < 1:1726113/137‑1 (MQ=255) cTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCAtt < 1:328264/140‑1 (MQ=255) cTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCAtt < 1:720688/140‑1 (MQ=255) ctCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGAGAAACCCCGTCATTCGTCCCATTCACCTTTa > 1:1555609/2‑140 (MQ=255) aTCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTa > 1:5280/1‑140 (MQ=255) aTCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTa < 1:1171700/140‑1 (MQ=255) aTCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTa > 1:137254/1‑140 (MQ=255) aTCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTa > 1:1313970/1‑140 (MQ=255) aTCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTa > 1:137247/1‑140 (MQ=255) cGCTCATCAGATATAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGACAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTaaa < 2:52224/140‑1 (MQ=255) cGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCCCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTaaa < 2:1601474/140‑1 (MQ=255) cTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTaaaaa > 1:1526643/1‑140 (MQ=255) atcaGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAacac > 1:543941/1‑140 (MQ=255) agagaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAAct > 1:2084740/1‑140 (MQ=255) gagaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAActc < 1:2234142/140‑1 (MQ=255) gagaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAActc < 2:1358020/140‑1 (MQ=255) gagaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAActc < 1:959596/140‑1 (MQ=255) gagaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAActc < 1:658591/140‑1 (MQ=255) gaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTg > 1:1044494/1‑140 (MQ=255) gaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTg > 1:1439252/1‑140 (MQ=255) gaAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTg > 1:598714/1‑140 (MQ=255) catcatcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGAc > 2:1637854/1‑140 (MQ=255) catcatcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGAc > 2:1079629/1‑140 (MQ=255) atcatcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACa > 1:2206852/1‑140 (MQ=255) tcatcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTACGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTATTCCCATTCACCGTTAAAAACACAAACTCTGCCTTTGGAGACac > 2:1246973/1‑139 (MQ=255) cctcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTGTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCAGTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGc < 2:1576026/138‑1 (MQ=255) catcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGc < 2:120482/140‑1 (MQ=255) catcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGc < 2:897972/140‑1 (MQ=255) catcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGc < 1:2373479/140‑1 (MQ=255) catcaACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCAGTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGc < 2:1594134/140‑1 (MQ=255) catcaACCGCCTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTGTCGCTAAATAACATTCAGCGACGGAGTCAAGTTCAAGATAAACCCCTGCATTCTTCCCAGTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGc < 1:982083/140‑1 (MQ=255) aaCCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTcc > 1:1207868/1‑140 (MQ=255) cgcgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCaa > 2:925954/1‑140 (MQ=255) gcgTAAAAAACCGCCCCGTCCGCAAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATGCGTCCCATGCACCTTTCGAAACACAAACTCGGCCTTTGGAGACAGCGTCCCAAg > 1:2146540/1‑140 (MQ=255) cgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCCCCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGc > 2:2353889/1‑140 (MQ=255) cgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAATAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGc > 1:1117669/1‑140 (MQ=255) cgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGc > 1:2091888/1‑140 (MQ=255) cgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGc > 2:2088500/1‑140 (MQ=255) cgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGc > 1:2029106/1‑140 (MQ=255) cgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGc > 1:9477/1‑140 (MQ=255) cgTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGGTCAAGATAAACCCCTTCATTCTTCCCATTCACCGTTAAAAACACACACTCTGCCTTTGGCGACCGCGTCCCAAGc > 2:2352797/1‑140 (MQ=255) catAAAAAATCGCGCCATCAGCCAGCTTC‑CTTTTCGCCAAATAATATTCATCTACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCATCTTTACAAACGCAAACTCTGCCTTTGgaga < 2:886165/125‑1 (MQ=255) catAAAAAATCGCGCCATCAGCCAGCTTC‑CTTTTCGCCAAATAATATTCATCTACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCATCTTTACAAACGCAAACTCTGCCTTTGgaga > 1:886165/3‑127 (MQ=255) catAAAAAATCGCGCCATCAGCCAGCTTC‑CTTTTCGCCAAATAATATTCATCTACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCATCTTTACAAACGCAAACTCTGCCTTTGgaga < 2:2112617/125‑1 (MQ=255) catAAAAAATCGCGCCATCAGCCAGCTTC‑CTTTTCGCCAAATAATATTCATCTACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCATCTTTACAAACGCAAACTCTGCCTTTGgaga < 2:886204/125‑1 (MQ=255) catAAAAAATCGCGCCATCAGCCAGCTTC‑CTTTTCGCCAAATAATATTCATCTACGGATTCAAGTACAAGATAAACCCCTTCATTCTTCCCATTCATCTTTACAAACGCAAACTCTGCCTTTGgaga > 1:2112617/3‑127 (MQ=255) tAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAACACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGctc < 1:635221/140‑1 (MQ=255) tAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGctc < 1:327100/140‑1 (MQ=255) tAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGctc < 1:1926693/140‑1 (MQ=255) tAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCGAAATAAAATTCATCGACGGATTCAAGTTCAAGATACACCCCTTCATTCTTCCCATTCAGCTTTAAGAACACAAACTCTGCCGTTGGCGACAGCGTCCCCAGctc > 1:2315093/1‑140 (MQ=255) tAAAAAACCGCCCCGTCCGCCAACTTC‑CAGTTCGCTAAATCATATTCATCGACGGATTCAAGTTCAATATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGctc < 1:662885/140‑1 (MQ=255) cGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGaaaa > 2:2390148/1‑140 (MQ=255) cccGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGAAAAAAt > 2:2160271/1‑140 (MQ=255) cccGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGAAAAAAt > 2:205151/1‑140 (MQ=255) cccGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTAATCGACGGATTCAAGTTCAAGATAAACCACTTCAGTCTGCCCATTCACCTTTAAAAACAAAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGAAAAAAt > 2:1561153/1‑140 (MQ=255) cGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGAAAAAATcc < 2:1526643/140‑1 (MQ=255) ccGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGAAAAAATCCAAt < 2:2341691/140‑1 (MQ=255) | CTTCCTCAGTCCCAGTCTTCTTTTCATATCCAAGCTCAAGCGACGTCTTCGTTTCCCTTTCCAAATCGCTCATCAGAGAGAAATTAGCATCATCATCAACCGCGTAAAAAACCGCCCCGTCCGCCAACTTC‑TTTTTCGCTAAATAAAATTCATCGACGGATTCAAGTTCAAGATAAACCCCTTCATTCTTCCCATTCACCTTTAAAAACACAAACTCTGCCTTTGGAGACAGCGTCCCAAGCTCTGAGAAAAAATCCAAT > NZ_CP034943/3522978‑3523237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |