| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,111,432 | C→A | 5.1% | intergenic (‑333/+219) | EO946_RS16070 ← / ← EO946_RS16080 | GNAT family N‑acetyltransferase/iron‑sulfur cluster assembly accessory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,111,432 | 0 | C | A | 5.1% | 703.7 / 8.1 | 262 | intergenic (‑333/+219) | EO946_RS16070/EO946_RS16080 | GNAT family N‑acetyltransferase/iron‑sulfur cluster assembly accessory protein |
| Reads supporting (aligned to +/- strand): ref base C (164/74); new base A (4/17); total (171/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 262 total aligned reads displayed.
GGTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGAAAAGCGTCAT > NZ_CP034943/3111297‑3111570 | ggTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAata > 1:1068211/1‑140 (MQ=255)ggTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAata > 2:4651335/1‑140 (MQ=255)ggTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAata > 1:1883397/1‑140 (MQ=255)ggTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAata > 1:2846206/1‑140 (MQ=255)ggTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTAAAata > 1:1056904/1‑140 (MQ=255)ggTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCGCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAata > 2:1604052/1‑140 (MQ=255) tACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAAtata > 2:2028692/1‑140 (MQ=255) tACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTATTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑ACCTTTATTGCCTTTACAAtata > 2:5083695/1‑140 (MQ=255) gAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAat < 2:1528124/140‑1 (MQ=255) gAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAat < 1:5055084/140‑1 (MQ=255) aaTATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatg > 2:2923273/1‑140 (MQ=255) ttGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaata > 2:915065/1‑138 (MQ=255) ttGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaata > 2:2329800/1‑138 (MQ=255) ttGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaaga > 2:2892906/1‑140 (MQ=255) ttGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGAATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCA‑AACTTTATTTCATTTAGAATATAAatgaagt > 1:3844839/1‑139 (MQ=255) ttGCCCTTGCTGCTACTCCAATTTCATGAAGAAGCTTCCTCATCATCAACTCGGCAATTGTATTTGTTAGTGCAAATGCAATCAAAATACCGTACGGTCAAGATAACCC‑CACTTACTTGCAGTTACAATATAAaggtaga > 2:3017677/1‑140 (MQ=255) tGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagat > 1:2562161/1‑140 (MQ=255) tGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagat > 2:4251966/1‑140 (MQ=255) tGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagat > 2:2641503/1‑140 (MQ=255) tGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGAATTTACAATATAAatgaaggt > 2:673081/1‑138 (MQ=255) gCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagatg > 2:4494750/1‑140 (MQ=255) gCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagatg > 2:3407837/1‑140 (MQ=255) cTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagatgaag > 2:2592469/1‑140 (MQ=255) cTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagatgaag > 2:1443058/1‑140 (MQ=255) cTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAatgaagatgaag > 2:1336851/1‑140 (MQ=255) gctgctACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTTCAATATAATTGAAGATGAaggag > 1:3750842/1‑140 (MQ=255) gctgctACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAaggag > 2:3461493/1‑140 (MQ=255) gctgctACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGAAATAAAAATACCGTACGTTAAATATAACCA‑AACTTTATTGCATTTACAATATAAATGAAGATGAacgag > 1:4265877/1‑140 (MQ=255) tACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTcgc < 1:3315858/140‑1 (MQ=255) tACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTcgc > 2:1675677/1‑140 (MQ=255) ccAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTaa < 1:2266768/140‑1 (MQ=255) aTTTCATGAAGAATCTTCCTCATCATCAACTGCTCAAATGTATTTTTTATTGCAAATTCAATAAAAATACCGTACGTTAAATATAACAC‑AACTTTATTGCATTTACAATATAAATGAAGAGTAAGTAGGTGGCGTAAAGt > 2:3246776/1‑140 (MQ=255) aTTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGt > 2:4921671/1‑140 (MQ=255) aTTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGt < 1:1166788/140‑1 (MQ=255) aTTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGt > 2:3305271/1‑140 (MQ=255) aTTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGt > 1:4115707/1‑140 (MQ=255) aTTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGt > 2:480599/1‑140 (MQ=255) aTTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGATAAATATAACCC‑AACTTTATTGAATTAACAATATAAATGAATATGAAGGAGTTCGCGTAAAGt > 2:4481966/1‑140 (MQ=255) aTGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAAtt > 2:4986830/1‑140 (MQ=255) aTGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAAtt > 2:4271747/1‑140 (MQ=255) gaagaaTCTTCCTCATCATCAACTCCACAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTGAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAAtttt < 2:3050427/140‑1 (MQ=255) ttCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTg > 2:297109/1‑140 (MQ=255) ttCCTCATCATAAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTTTCTTTTg > 2:4380647/1‑140 (MQ=255) ccTCATCATCAACTCCTCAAAGGTATTTTTTAGTGCAAATGCAATAAAAAGACCGTACGGTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGaa < 1:1293666/140‑1 (MQ=255) aCTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAAt > 1:4810689/1‑140 (MQ=255) aCTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAAt > 2:273485/1‑140 (MQ=255) ctcAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTc < 2:3499387/140‑1 (MQ=255) ctcAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAAGTTTGTCTTTTGAAGCAATCTAAATTTTc > 2:2426308/1‑140 (MQ=255) aTGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTccgccg < 2:5108146/140‑1 (MQ=255) ttttttATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTACAGTGACTTTTGTCTTTTGAAGCAATCTCAATTTTCCGCCGTTTCt > 2:3071758/1‑140 (MQ=255) ttttttATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCt > 2:4414313/1‑140 (MQ=255) ttttttATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCt < 2:364930/140‑1 (MQ=255) tttATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCttta > 1:4108736/1‑140 (MQ=255) tATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCtttatt > 1:95252/1‑140 (MQ=255) tATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCtttatt > 1:2676025/1‑140 (MQ=255) aTTGCAAATGCAATAAAAATACCGTACGTTAACTATAACCC‑CACTTTATTGCATTTAGAATATACATGAAGATGAAGGAGGTCGCGTAAAGTGACTTTTGTGTGGTGAAGCTATCTAAATTTGCCGCCGTTTCtgtatgt > 1:883871/1‑138 (MQ=255) tGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCAGCCGTTTCTTTATTTaa > 1:739531/1‑140 (MQ=255) gCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAg < 2:4108736/140‑1 (MQ=255) gCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAg < 2:3621500/140‑1 (MQ=255) aaaTGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGcc < 2:1121990/140‑1 (MQ=255) atactttACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAATATGACGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGAAATCAAAATTTTCCGCCTTTTCTTAATTTAAGCAATAATAAAAACGc < 1:1208681/134‑1 (MQ=255) aTACCTAACTTTAAATAAAACCC‑AAATTTATTGAATTAACAATATAATTTAAGATGATGGAGGTCGCGAAAATTGAATTTTGTCTTTTGAACCAATCTAAATTTTCCGCCTTTTATTTTTTTAAGCAATAATAAAAACGc < 1:4028595/140‑1 (MQ=255) taacGTACTTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATTAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGcc < 2:4169195/137‑1 (MQ=255) tACCGTCCTGTAATTATAACCC‑AACTTTTTTGCATTTACAATATAATTTAAGATGAAGGTGGTCGCGTAAAGTGATTTTTGTGTTTTGAAGCAATCTAAATTTTCCGCGGTTTTTTTATTTAAGCCATAATAAAAACGcc < 2:804755/140‑1 (MQ=255) tACCGTACTTTAAATATAACCA‑AACTTTATTGCATTTAAAATATAAATGAAGATTAAGGAGGTCGCGAAAAGTGATTTTTGTCTTTTCAAGAAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGcc < 2:2529243/140‑1 (MQ=255) tACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCTTTTCTTTATTTAAGCCATAATAAAAACGcc < 2:3741762/140‑1 (MQ=255) aCCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGcc > 1:4786483/1‑139 (MQ=255) ccGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGTATCAATCTAAATTTTCCGCCGTTTCTTTATTTATGCCATAATAAAAActcctc > 2:3833888/1‑140 (MQ=255) cGTACGTTAAATATAACCC‑AACTTTATGGCATTTACAATATAACTGAAGATGAAGGAGGTCGCTTAAAGTTAATTTTGTCTTTTCAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCAATAATAAAAACGCCTcc < 1:3566236/140‑1 (MQ=255) cGTACCTTAAATATCACCC‑AACTTTATGGCATTTACAATATAAATTAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAACCAAACTAAATTTTCCGCCGTTTTTTTATTTAAGCAATAATAAAAACGCCTcc < 1:3597394/140‑1 (MQ=255) gTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGTATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTccc > 1:657383/1‑140 (MQ=255) gTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCa < 1:2419608/123‑1 (MQ=255) gTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCGTccc > 2:3770407/1‑140 (MQ=255) gTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTccc > 1:2305504/1‑140 (MQ=255) gTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTccc > 1:1767698/1‑140 (MQ=255) gTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTccc > 1:4880422/1‑140 (MQ=255) tACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCt > 1:4967785/1‑140 (MQ=255) caCGTTAAATAAACCCA‑AATTTTATTCAATTAACAATAAAAATTAAGATGACGGAGGTCGCTTAACGTCATTTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAACACGCCTCCCt < 1:4408267/139‑1 (MQ=255) tAAATATAACCC‑ATCTTTATTGCATTTACAATATAAATGAATATGAAGGAGGTGGCGTAACTTGAATTTTGTCTTTTGAAGCAATATAAATTTTCCGCCGTTTATTTATTTAAGCCATAATAAAAACGCCTCCCTTAACg < 1:1424587/140‑1 (MQ=255) tAAATATAACCC‑AATTTTATTGATTTTAAAATATAAATTACGATGATGTTGGTCGCGTAAAGTGATTTTTTTCTTTTTAAGAAATCTAATTTTTCCGCCTTTTATTTATTTAAGCAATAATAAAAACGCCTCCCTTAACg < 1:439653/140‑1 (MQ=255) aaaTATAACCC‑AAGTTTAGTCCATTAAAAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTTAATTTTTTCTTTTGAAGCAATATAAATTTTCCGCCGTTTCTTTATTTAACCCATAATAAAAACGCCTCCCTTAACGa < 1:3231496/140‑1 (MQ=255) aaaTATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTATTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGa < 2:728628/140‑1 (MQ=255) aaaTAAAACCC‑ATATTATTTGCTTTTACATTTTAAATTAATATTACGTTGTTCGCTTAAATTTAATTTTTTCTTTTTAACCAATCTAAATTTCCCGCCGTTTTTTTATTAAAGCCATAATAAAAACGCCTCCCTTAACGa < 1:3461493/140‑1 (MQ=255) aaTATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGAt > 1:70341/1‑140 (MQ=255) taACCC‑AACTTTATTCCATTTACAATATAAATGAAGATGACGGTGGTCGCGTAAAGTGATTTTTGTATTTTGAAGCAATCTAAATTTTCCGCCGTTTGTTTATTTAAGCCATAATAAACACGCCTCCCTTAACGATGGTc < 1:537448/140‑1 (MQ=255) aaCCCAAACTTTTTTGCATTTAAAATAAAAATGAAGATGAAGGAGGTCGCTTAAAGTTAATTTTGTCTTTTCAAGAAATCTAAATTTTCCGCCTTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTc < 1:3407837/140‑1 (MQ=255) aaCCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAATTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCAATAATAAAAACGCCTCCCTTAACGATGGTCt > 1:3159679/1‑140 (MQ=255) aCCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTa > 2:4426926/1‑140 (MQ=255) caCTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATATTGTCTTTTTAAGCAATCTAAATTTTCCGCCGTTTATTTATTTAAGCAATAATAAAAACGCATCCCTTAACTATGTTCTATCGc > 2:3880697/2‑140 (MQ=255) aaCTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGc > 2:1042907/1‑140 (MQ=255) acttgtttGAATTTACAATATAATTTAAGATGACGGTGGTCGCTTACAGTCAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAACCCATAATAAACACGCCTCCCTTAACGATGGTCTATCGCt < 1:491270/134‑1 (MQ=255) aCTTTATTGAATTTAAAATATAAATTAAGATGACGGTGGTGGCTTAACGTGATTTTTTTTTTTTGACGCAATATAATTTTTCCGCGTTTTCTTTATTTAAGCAATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCt < 1:2619376/140‑1 (MQ=255) cTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTa > 1:2098539/1‑140 (MQ=255) ttGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGaaa > 2:2383413/1‑140 (MQ=255) ttGCATTTAAAATATAAATTAAGATGAAGTCGGTGGCGTAAAGTCAATTTTGTCTTGTGAAGCAATGTAAATTTTCCCCCGTTTCTTTATTTAACCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGaaa < 1:1637616/140‑1 (MQ=255) ttGCATTTAAAATATAAATGAAGATGAAGGAGGTCGCGTAATGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCAAAAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGaaa < 1:2923273/140‑1 (MQ=255) tGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGaaaa > 2:4704622/1‑140 (MQ=255) tGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGaaaa > 2:610543/1‑140 (MQ=255) cATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGAAAAGc > 1:901854/1‑140 (MQ=255) tttACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGAAAAGCGt > 1:4578144/1‑140 (MQ=255) | GGTACGAATATTGCCCTTGCTGCTACTCCAATTTCATGAAGAATCTTCCTCATCATCAACTCCTCAAATGTATTTTTTATTGCAAATGCAATAAAAATACCGTACGTTAAATATAACCC‑AACTTTATTGCATTTACAATATAAATGAAGATGAAGGAGGTCGCGTAAAGTGAATTTTGTCTTTTGAAGCAATCTAAATTTTCCGCCGTTTCTTTATTTAAGCCATAATAAAAACGCCTCCCTTAACGATGGTCTATCGCTAAGAAAAGCGTCAT > NZ_CP034943/3111297‑3111570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |