| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,103,816 | C→A | 8.5% | intergenic (‑33/+118) | azoJ ← / ← EO946_RS10560 | FMN‑dependent NADH‑azoreductase AzoJ/TraR/DksA family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,103,816 | 0 | C | A | 8.5% | 345.1 / 2.1 | 143 | intergenic (‑33/+118) | azoJ/EO946_RS10560 | FMN‑dependent NADH‑azoreductase AzoJ/TraR/DksA family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (74/49); new base A (16/2); total (92/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 143 total aligned reads displayed.
GGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATCTTGTTCAC > NZ_CP034943/2103680‑2103953 | gggTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATAATGTAGACATTTTTATTCCT‑CCCGGTAAACTTTTTATATTAAATTa > 2:692160/1‑140 (MQ=255) tATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACaaa < 2:1540362/140‑1 (MQ=255) tATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACaaa < 1:3492102/140‑1 (MQ=255) tATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACaaa < 1:1884820/140‑1 (MQ=255) aTTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGTTTTTAAAAAAAATAATGTAGACAATTTTATTACG‑CCCGGGAAAATTTTTTTATTAAATTAaaaaa > 1:2046258/1‑139 (MQ=255) ttttCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGATTAGTTGAATCGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATa < 1:1864696/140‑1 (MQ=255) ttCATTCTAAGCAGCTAAGAAAGCCTCGTCAAGTTTAGTTGAAACGACTTCTTCGGCTGTACGGTCGATTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGt < 2:2851706/140‑1 (MQ=255) tttATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTTCAAATAATACTGGAGACATTTGTATTGCT‑GCCGGTAAACTTTTTATATTTACTTACCAATAGTATg > 2:3657695/1‑140 (MQ=255) tttATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATg < 1:2602895/140‑1 (MQ=255) tttATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACAGGAGACATTTGTATTACT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTAtt > 2:3952927/1‑139 (MQ=255) tttATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTAAAAATAATACAGTAGACATTTGTATTACT‑CCCGGTAAACTTTTTATATTAACTTAAAAATAGTAtt > 2:2698854/1‑139 (MQ=255) tttATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATg > 2:1059536/1‑140 (MQ=255) tataAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGTGTTTAAAAATAATACTGTTGAGATTTTTTTTGCT‑CGCGGTGAACTTTGTTTATTAAGATAGAAATAGTAttgt > 1:3793433/1‑137 (MQ=255) tataAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTACAAATAAAAATGTAGACATTTTTTTTGCT‑GCCCGTAAACAGTTTATATTAACTTAAAAAAAGTAtttt > 1:1835138/1‑140 (MQ=255) tataAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTAAAAATAATAATTTATACATTTTTATTGCT‑CCCCGTAAAATTTTTATATTAACTTAAAAATATTATGtt > 1:2677277/1‑140 (MQ=255) tataAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTAAAAATAATAATGTAGACATTTTTATTACT‑CCCGGTAAAAGTTTTATATTAAATTAAAAATATTAtttt > 1:2404359/1‑140 (MQ=255) gcTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTGCT‑CCCGGTAAACTTTTTTTATTAAATTAAAAATAGTATGTTActttgtt > 2:3518787/1‑140 (MQ=255) tAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGTTTTTAAAAATAAAAATTTAGGAAATTTTATTGCTGCCCGGT‑TACTTTTTATATTTAATTTAAAATAGTATGTTTGTTTAtttt > 1:3733027/1‑140 (MQ=255) tAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTACAAATAATACTGTAGACCATTTTATTTCT‑CCCGGTAAACGTTTTATATTAACTTACAAATATGATTTTACTTTCtttt > 1:762143/1‑140 (MQ=255) gAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGGTTTTACAAATAATAAAGTATACATTTGTATTCCG‑CGCGGTAAAGTTTTTAAAATAAAATAAAAATATTATGTTAATTTGTTTTTTa > 2:1304786/1‑140 (MQ=255) gAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAAAACGGTAGACATTTTTATTGCG‑GCCGGGACACGTTTTATCATAACTTACAAAAAGTATGTTACTTTCTTTTTTa > 2:233970/1‑140 (MQ=255) aaaGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTTATTTTAAAAATAAAACTGTAGACAATTTTATTCCT‑CCCGGTAAAAATTTTATATTAACATAAAAATAGTATTTTAATTTATTTTTTaa > 2:3778264/1‑139 (MQ=255) aaGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACg < 1:2866545/140‑1 (MQ=255) gCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGAGTTTAAAAATAATACAGTAGACAATTGTATTACT‑CCCGCGAAACGTTTTATATTAAAATAAAAATAGTATGTTACTTTCTTTTTTAAGCa > 2:2555565/1‑140 (MQ=255) gTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTc < 2:127916/140‑1 (MQ=255) aatgTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGAGTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCAGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCaa < 1:2948121/137‑1 (MQ=255) aaaGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCaa < 1:2049423/140‑1 (MQ=255) aaaGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCaa < 1:1365257/140‑1 (MQ=255) ttGAAACGCCTTCTTCGGCTGTACGGTCGCTTTATTTTTAAAATAATAATGTATAAATTTTTTTTCCT‑CCCGGTAAACTTTTTATAGTAACTTACAAAAACTATTTTAATTTATTTTTTAATCAAAGTCAATCACTTTAt > 2:4074970/1‑140 (MQ=255) ttGAAACGCCTTCTTCGGCTGTACGGTCGCTTTATTTTAAAAATAATACTTTAGACATTTTTATTCCT‑CCCGGGAAACTTTTTATATTAAATTAAAAATAATATTTTAATTTGTTTTTTAAGCAAAATAAATAACTTTAt > 2:211180/1‑140 (MQ=255) ttGAAACGCCTTCTTCGGCTGTACGGTCGCTTGTTTTTACAAATAATACTGTAGACAATTGTATTCCT‑CCCGGTAAACATTTTATATTAACTTACAAATAGTATGTTACTTTCATTTTTTAGCAAAGTAAATCACTTTAt > 2:4136278/1‑140 (MQ=255) ttGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTTGAAAAAATAATGTAGACCTTTGTATTCCG‑CCCGGGAAACTTTTTATATTAAATTACAAATAGTATGTTTGTTTGTTTTTTTCGCAAAGTCAATCAATTTAt > 1:4071959/1‑140 (MQ=255) tGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTAtt < 2:3747066/140‑1 (MQ=255) aaaCGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATCCTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTAtttt < 2:3731320/140‑1 (MQ=255) aCGCCTTCTTCGGCTGTACGGTCGCTTGATTTTTAAAAAAAAAATTTATACATTTTTATTACA‑ACCGGTAAAAATTTTATATTAAATTAAAAAAAGTATTTTAATTTATTTTTTAAGCAAAGTAAATAACATTAttttta > 2:689610/1‑138 (MQ=255) aCGCCTTCTTCGGCTGTACGGTCGCTTGATTTTAAAAATAATAATGTAGACATTTGTATTCCT‑CCCGGTTAACTTTTTATATTAACTTAAAAATAGTATGTTACTTTATTTTTTAAGCAAAGTCAATAACGTTATTTTGa > 2:444808/1‑140 (MQ=255) aCGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTTAAAATAAAACTGTATACCTTTGTTTTACT‑GCCGGTAAACTGTTTTTATTAAATTAAAAAAAGTATGTTTCTTTTTTTTTTTGGGAAAATGAATAACTTTAtttttt > 1:84120/1‑138 (MQ=255) tACGGTCGCTTGTTTTTAAAAAAAATAATGTAGACAATTGTATTCCT‑CCCGGGAAACTTTTTATATTAACTTACAAATAGTATGTTAATTTCTTTTTTAAGCAAAGTCAAAAAATTTATTTTTAAAATGTTAtttttttt > 2:3505335/1‑140 (MQ=255) tACGGTCGCGTGTTTTTAAAAAAAATACGGTAGACATTTTTATTGCT‑CCCGGGAAAATTTTTATATTAAATTAAAAAAATTATGTTAAATTATTTTTTAAGCAAAATCAATCAATTTATTTTGAATATGAGAtttttttt > 2:502012/1‑140 (MQ=255) tACGGTCGCGTGATTTTACAAATAATACTGTAGACAATTGTATTCCT‑CCCCGTAAACTTTTTATATTAAATTACAAATAGTATGTTACTTTATTTTTTTAGCAAAGTCAATCACTTTATTTTGAATATTAGAtttttttt > 2:2333215/1‑140 (MQ=255) tCGCTTGATTTTAAAAATAAAAATGTAGACATTTTTATTGCT‑CCCGGTAAACTTTTTATATTAAAATAAAAATAGTATGTTACTTTCTTTTTTACGCAAAATAAATCACTTTATTTTGAATATTAGATTTTTTTTA‑aaaa > 2:1927637/1‑140 (MQ=255) tCGCGTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTAAAAATATTATTTTACTTTATTTTTTAAGCAAAGTAAAACACATTATTTTTAATAAGAGATTTTTTTTC‑aaaa > 2:4211443/1‑140 (MQ=255) gcgtGAATTTAAAAATAATAAAGTAGACAATTTTATTACT‑CCCGGTAAACTTTTTATATTAACTTACAAAAATTATTTTACTTTATTTTTTACGCAAAGTCAAACACTTTATTTTTAATATGTAAATTTTTTTA‑aaaaaa > 2:2557645/4‑140 (MQ=255) gCTTGATTTTACAAATAATAATGTAGACATTTGTATTACT‑CCCGGTAAAATTTTTATATTAACTTACAAATATTATTTTAATTTCTTTTTTAAGCAAAGTCAATCACTTTATTTTTAATATTAGATTTTTTTTG‑aaaaaa > 2:408501/1‑140 (MQ=255) cTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATACTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑aaaaaaa < 1:2815721/140‑1 (MQ=255) tgcttttAAAAATAATAATTTAGACATTTGTATTCCT‑CCCCGTAAACTTTTTATATTAACTTACAAATATTATTTTACTTTATTTTTTAAGCAAATTAAATCAATTTAATTTTAATATTATATTTTTTTTA‑aaaaaaaaa > 2:2181983/4‑139 (MQ=255) tttACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAg < 1:1186916/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCaatt > 2:3029383/1‑138 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGt < 2:3790835/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGt > 2:735439/1‑140 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGt < 1:692160/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGt < 2:608127/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGt < 1:508273/140‑1 (MQ=255) tACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTa < 2:3626958/140‑1 (MQ=255) tACAAATAATACTGTAGACATTTGTAGTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTa < 2:2010271/140‑1 (MQ=255) aaaaTAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACa < 1:1059536/139‑1 (MQ=255) aataCTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTaa < 2:3300788/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAatat < 2:173061/140‑1 (MQ=255) aCTCTAGACATTTGTAGTCCT‑CCCGGTAACCTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAatat < 1:762483/140‑1 (MQ=255) cTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAAGCAAGTACATCTAatat < 2:2440963/140‑1 (MQ=255) gTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCgg > 2:228945/1‑140 (MQ=255) tAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATTTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTA‑AAATAAAAGCAAGTACATCTAATATCGgt > 2:2059316/1‑140 (MQ=255) tAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGgt > 1:2997522/1‑140 (MQ=255) tAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGgt > 1:1551475/1‑140 (MQ=255) gACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTAGTTTCTTTTTTACGCAAAGTCAATCACTTTTTTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGgtgt > 2:3480814/1‑140 (MQ=255) gACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGgggt > 1:4000682/1‑140 (MQ=255) gACATTTGTATTCCT‑CCCGGTAAACGTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAAGCAAGTACATCTAATGTCGgtg > 2:532299/1‑140 (MQ=255) aaaTTTGTATTCCT‑CCCGGTAAACATTTTATATTAAATTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTa < 1:4074970/138‑1 (MQ=255) aCATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTa < 1:4136278/140‑1 (MQ=255) aTTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTAGGCCAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTAct > 2:2618911/1‑140 (MQ=255) aTTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTAct > 2:4085190/1‑140 (MQ=255) aTTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTAct > 2:3459806/1‑140 (MQ=255) aTTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTAAATCTAATATCGGTGTAct > 2:2662501/1‑140 (MQ=255) tGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTActtgc > 2:3414581/1‑140 (MQ=255) tGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTActtgc < 2:531162/140‑1 (MQ=255) tGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTActtgc > 2:582576/1‑140 (MQ=255) tGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTActtgc > 2:1569609/1‑140 (MQ=255) ct‑ccCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAt > 2:318573/1‑140 (MQ=255) ct‑ccCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAt > 1:1395747/1‑140 (MQ=255) ct‑ccCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAt > 1:3117695/1‑140 (MQ=255) ct‑ccCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAt > 2:19382/1‑140 (MQ=255) ct‑ccCGGTAAACTATTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACCCAAAGTCAATCACTTTATTTTGAATATGATATTTTTTTTA‑AAAAAAAAGCAATTAAATATAATATCGTTGTACTTGCTTGCCaa > 2:1626556/1‑139 (MQ=255) cccGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATGTAATATCGGTGGACTTGCTGGCCAttt > 2:566475/1‑140 (MQ=255) cccGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAttt > 2:3813191/1‑140 (MQ=255) cccGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAttt > 2:1503518/1‑140 (MQ=255) cccGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAttt > 1:2237915/1‑140 (MQ=255) cccGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAttt > 1:1195093/1‑140 (MQ=255) cccGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCAttt > 1:637757/1‑140 (MQ=255) cccGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGAAAGTACATCTAATATCGGTGTACTTGCTTGCCAttt > 1:3433474/1‑140 (MQ=255) ggTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAATGCAAGTACAGCTAATATCGGTGTACTTGCTTGCCATTTTCa > 1:2360999/1‑140 (MQ=255) ggTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATAGGTGTACTTGCTTGCCATTTTCa > 2:3741181/1‑140 (MQ=255) aCTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACttag > 1:154887/1‑138 (MQ=255) aCTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCg > 1:810847/1‑140 (MQ=255) tttATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATc < 1:2772781/140‑1 (MQ=255) ttATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATc < 1:2383198/140‑1 (MQ=255) tAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATCTTGTTCa < 2:2404359/140‑1 (MQ=255) aaCTTACAAATTGTATGTTACTTTCTTTTTTCCGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATCTTGTTCAc < 1:3131057/140‑1 (MQ=255) aaCTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATCTTGTTCAc < 1:2333215/140‑1 (MQ=255) aaCTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATCTTGTTCAc > 2:737135/1‑140 (MQ=255) aaCTTACAAATAGTATGTTACTTTCTTTTATACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATCTTGTTCAc < 1:4120345/140‑1 (MQ=255) | GGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCT‑CCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTC‑AAAAAAAAGCAAGTACATCTAATATCGGTGTACTTGCTTGCCATTTTCACTTCGAATCTTGTTCAC > NZ_CP034943/2103680‑2103953 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |