| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,649,600 | T→C | 6.6% | intergenic (+3/+43) | EO946_RS13705 → / ← EO946_RS13710 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,649,600 | 0 | T | C | 6.6% | 402.6 / 13.3 | 124 | intergenic (+3/+43) | EO946_RS13705/EO946_RS13710 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (58/57); new base C (4/4); total (63/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
GCTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCTTCTGTGCCT > NZ_CP034943/2649463‑2649733 | gCTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCttaaattaa > 1:3848967/1‑140 (MQ=255)gCTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCttaaattaa > 1:3687876/1‑140 (MQ=255)gCTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCttaaattaa > 1:765850/1‑140 (MQ=255) cTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCttaaattaaa < 2:3555143/140‑1 (MQ=255) cTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCttaaattaaa > 1:2298423/1‑140 (MQ=255) cTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCttaaattaaa > 1:172620/1‑140 (MQ=255) ttAACACGCACTCTACAAAAAAACTATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCTTTTTTATATAAGAAAGATTGGTACCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTaaaa < 1:620739/140‑1 (MQ=255) cACGCACACTACAGAAAACCGATAGTCCCTAACAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATACGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGc < 2:3337853/140‑1 (MQ=255) aCTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAATACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAATTAGGCAGcca > 2:3004347/1‑139 (MQ=255) aCTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAATCATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCg > 1:546135/1‑140 (MQ=255) aCTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCg > 1:149720/1‑140 (MQ=255) aCTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCg > 2:1404268/1‑140 (MQ=255) aCTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCg > 1:454160/1‑140 (MQ=255) aCTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTACCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAATTTAAAAAGTCAGCCg > 2:2424828/1‑140 (MQ=255) tACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGcaca > 2:1550936/1‑140 (MQ=255) tACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGcaca > 2:538058/1‑140 (MQ=255) tACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGcaca > 2:2676884/1‑140 (MQ=255) tACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGcaca > 2:3165905/1‑140 (MQ=255) tACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGcaca > 2:1746894/1‑140 (MQ=255) tACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCAGCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGcaca > 2:15696/1‑140 (MQ=255) tACAAAAAACCGATATTCCCCAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTTCAAAAGCATTTCGCACAGCGGAAAAGAAAATATTCTTAAATCAAAAAGGCAGCCGccca > 2:415813/1‑140 (MQ=255) tACAAAAAACCGATATTCCCCAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTTCAAAAGCATTTCGCACAGCGGAAAAGAAAATATTCTTAAATCAAAAAGGCAGCCGcaca > 2:2050188/1‑140 (MQ=255) tACAAAAAACCGATATTCCCCAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTTCAAAAGCATTTCGCACAGCGGAAAAGAAAATATTCTTAAATCAAAAAGGCAGCCGcaca > 2:416018/1‑140 (MQ=255) aCCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTATAAAGGCAGCCGCACAAGCGGCTg > 2:3169204/1‑140 (MQ=255) aCCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAATGGGAGCGGCACATGCGGCTg > 2:4049050/1‑140 (MQ=255) aCCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTg > 1:4241280/1‑140 (MQ=255) aCCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTg > 1:4057826/1‑140 (MQ=255) aCCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTg > 2:2066294/1‑140 (MQ=255) cGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAATGGCAGCCGCACAAGCGGCTGcc > 2:345680/1‑140 (MQ=255) cGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGcc > 1:1049096/1‑140 (MQ=255) cGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGcc > 1:1896782/1‑140 (MQ=255) atatTCCCTAAAAATATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCtt < 2:3097546/140‑1 (MQ=255) cccTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTc > 2:2848160/1‑140 (MQ=255) ccTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAATAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCa < 1:637808/140‑1 (MQ=255) tAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCata > 1:418274/1‑140 (MQ=255) tAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCata > 2:1692361/1‑140 (MQ=255) aTTCCGGGTTTTTGGCTGCAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAAGATTTCGCACAGCGGAAAAGTAAATATTCTTAAATTAAAAATGCAGCCGCACAAGCGGCTGCCTGCGTTCATATA‑ttttt > 2:72606/1‑140 (MQ=255) ttCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCAGAGCGGAAAAGAAAATATTCTTACATTAAAAAGGCAGCCGCACAAGAGGCTGCCTTCGGTCATATA‑TTTTTa > 1:1903686/1‑140 (MQ=255) tCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑tttttcc > 1:2272850/1‑138 (MQ=255) gagaTCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGaaa < 2:2195353/140‑1 (MQ=255) gagaTCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGaaa < 2:2150976/140‑1 (MQ=255) gagaTCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGaaa < 2:2070383/140‑1 (MQ=255) cATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCAt < 2:949482/140‑1 (MQ=255) ttttATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAACTCAGTTTCATTTg > 2:684638/1‑140 (MQ=255) ttATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGtt < 2:454160/140‑1 (MQ=255) ttATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGtt < 2:546135/140‑1 (MQ=255) atataAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAACTCAGTTTCATTTGTTCa > 1:4183377/1‑140 (MQ=255) agaaagaTTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGa < 1:683469/140‑1 (MQ=255) agaaagaTTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGa < 2:3848967/140‑1 (MQ=255) agaaagaTTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGa < 2:3078055/140‑1 (MQ=255) agaaagaTTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGa < 2:149720/140‑1 (MQ=255) aTTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCtt > 1:1055187/1‑140 (MQ=255) tCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCg > 2:2951250/1‑140 (MQ=255) ccAAAAACATTTCGCACAGCGGAAAATAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGa < 1:2468391/140‑1 (MQ=255) ccAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGa < 1:3423931/140‑1 (MQ=255) aaaaaCATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATa > 2:907555/1‑140 (MQ=255) aaaaCATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAg < 2:637674/140‑1 (MQ=255) aTTTGGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAATGCAGCCGCACAAGCGGATGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 1:2883085/140‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCg > 2:3456442/1‑66 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCg < 1:3456442/66‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCg < 1:2094522/66‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 2:4057826/140‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 2:4241280/140‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 1:3165905/140‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 1:2676884/140‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 1:1550936/140‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 1:2848160/140‑1 (MQ=255) aTTTCGCACAGCGGAAAAGAAAATATTCGTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 1:2133758/140‑1 (MQ=255) aTTTCGCACAGCGCAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 1:3714832/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATCTTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 1:988796/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 2:4229404/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 1:1900141/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 1:15640/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 2:1199625/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 2:3376317/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 2:335174/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 2:3377673/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATCAAAAAGGCAGCCGCACAAGCGGCTGCCTT‑TATCATGTATTTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 1:416018/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATCAAAAAGGCAGCCGCACAAGCGGCTGCCTT‑TATCATGTATTTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 1:2050188/140‑1 (MQ=255) ttCGCACAGCGGAAAAGAAAATATTCTTAAATCAAAAAGGCAGCCGCACAAGCGGCTGCCTT‑TATCATGTATTTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTca < 1:3377449/140‑1 (MQ=255) tCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct > 1:61957/1‑137 (MQ=255) tCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCctct < 2:61957/137‑1 (MQ=255) cGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTcaca > 2:469733/1‑140 (MQ=255) cGCACAGCGGAAAAGAAAATAGTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCCGGCGACAGCTTAATTCGATAGCCTCTcaca < 1:1730024/140‑1 (MQ=255) gCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTaaa > 1:482829/1‑140 (MQ=255) cGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAAt > 2:951088/1‑140 (MQ=255) cGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAAt > 2:4132123/1‑140 (MQ=255) attaaaagaaaaTATTCTTAAATAAAAAAAAAAACCCCACAAGCTGCTGCGATCGTTCATATA‑TTTTTACTTTCTGACTTAATAAAAAAGAATCATATATTCAGCCGACAGATTAATTCGATAGCCTCTCACAGAAAAAt > 2:1432101/4‑140 (MQ=255) aaagaaaaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGAc < 1:1628892/140‑1 (MQ=255) aaagaaaaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGAc < 1:3870253/140‑1 (MQ=255) aaagaaaaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGAc < 1:1329492/140‑1 (MQ=255) aaagaaaaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGAc < 1:3094731/140‑1 (MQ=255) aaaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCtt < 2:3687876/140‑1 (MQ=255) aaaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCtt < 2:816231/140‑1 (MQ=255) aaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATCTA‑TTTTTACTTTCTGACGGCAGTAATCAGTTTCATTTGTTAAGGCGACAGCTTAAGTCGATAGCCTAACACATTTAAATAGACCGCTTc > 1:3947909/1‑140 (MQ=255) aaTATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAAACAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCTTc > 2:3626059/1‑140 (MQ=255) ttCTTAAATTAAAAAGGCAGCCGCACAAGGGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCTTCtgtg < 2:1080101/140‑1 (MQ=255) tCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCTTCTGTGc > 2:2216983/1‑140 (MQ=255) ttaaattaaaAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCTTCTGTGCCt > 1:3077383/1‑140 (MQ=255) ttaaattaaaAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCTTCTGTGCCt > 2:1849442/1‑140 (MQ=255) | GCTTATCACGCACTCTACAAAAAACCGATATTCCCTAAAAAGATTCCGGGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGATTGGTTCCAAAAACATTTCGCACAGCGGAAAAGAAAATATTCTTAAATTAAAAAGGCAGCCGCACAAGCGGCTGCCTTCGTTCATATA‑TTTTTACTTTCTGACGGCAGAAATCAGTTTCATTTGTTCAGGCGACAGCTTAATTCGATAGCCTCTCACAGTTAAATAGACCGCTTCTGTGCCT > NZ_CP034943/2649463‑2649733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |