| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 177,014 | 0 | C | G | 31.6% | 172.1 / 21.4 | 109 | intergenic (+187/‑85) | EO946_RS01020/EO946_RS01025 | alcohol dehydrogenase/SulP family inorganic anion transporter |
| Reads supporting (aligned to +/- strand): ref base C (19/46); new base G (30/0); total (63/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.20e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 109 total aligned reads displayed.
GTTTGAGCCATTATTTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAA > NZ_CP034943/176884‑177148 | gTTTGAGCCATTATTTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTTCTTTGAttt > 1:839855/1‑140 (MQ=255) aGCCATTATTTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTccc > 2:68658/1‑140 (MQ=255) aGCCATTATTTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTATccc > 1:463975/1‑140 (MQ=255) aGCCATTATTTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTCTccc > 2:169863/1‑140 (MQ=255) ccATTATTTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCGTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGt < 1:1046838/140‑1 (MQ=255) ttattTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTaaa < 2:142170/140‑1 (MQ=255) ttattTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTaaa < 1:1810714/140‑1 (MQ=255) ttattTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTACTTTCATTTGTCCCGTaaa > 1:450048/1‑140 (MQ=255) cttcATCATAGATCTTGCGTATTTGATCAAATTTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATaaaga < 2:1694827/140‑1 (MQ=255) catcatAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTATGCCGTAAAATaaagaaag > 1:190890/1‑140 (MQ=255) tcatAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCt < 2:527610/140‑1 (MQ=255) catAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTAAATTATACCCTAAAATAAAGAAAACta > 1:937289/1‑139 (MQ=255) atAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTcc < 1:888640/140‑1 (MQ=255) gATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCaa < 2:715062/140‑1 (MQ=255) gATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCaa < 2:366588/140‑1 (MQ=255) cTTGAGTATTTGATCAAAATTTAATATGATAATATTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATac < 1:52157/140‑1 (MQ=255) tGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTATCCCGTAAAATAAAGAAAGCTCCCAATaaaa > 1:1415762/1‑140 (MQ=255) tGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATacaa < 1:1855469/140‑1 (MQ=255) gCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGTAAGCTCCCAATacaaa > 2:2038805/1‑139 (MQ=255) gCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCATTCATGTGTCCCCTAAAATAAAAAAATCTCCCAATacaaa > 2:1614750/1‑139 (MQ=255) gCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACGTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAAaacaac > 1:445414/1‑140 (MQ=255) tCAAAATTTAATATGATACTCTTTGTATAATAACTCCGTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTg < 1:378341/140‑1 (MQ=255) tatGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTCATTTGTGCCGTAAAATAAAGAAAGCTCCCAAAACAACAAAT‑AAGGTGCGGgtttattt > 2:1024981/1‑140 (MQ=255) gATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTCTACCCTAAAATAAAGAAAGCTCCCAAAAAAACAAAA‑ACGGTGCGGGTTTAtttttt > 1:1215875/1‑140 (MQ=255) aTACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGTAAGCTCCCAATAAAAAAAAT‑AAGGTGCGGATTTATTTTTTa > 2:2009077/1‑140 (MQ=255) aTACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTATGCCGTAAAATAAAGAAAGCTGCCCATAAAACAAAA‑AAGGTTGGGAGTTATTTTTTa > 2:1602055/1‑140 (MQ=255) tACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTATCCCCTAAAAAAAAGAAAACTACCAAAACAAAAAAA‑AAGGTGCGGATTTATTTTTTaa > 2:124584/1‑140 (MQ=255) tACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTACTCTTTTTATCAGGTCGTTTTTGTTTAAATTATAACGTAAAAAAAAGAAAGCTACCCAAAAAAAAAAT‑AATGTGCGGGttttttttttta > 1:1713598/1‑138 (MQ=255) gagacaggTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTaaa < 1:950429/133‑1 (MQ=255) tttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTGAATTATCCCGTAAAAAAAATAAAGATCCCAAAAAAAAAAAT‑AACGTGCGGGGTTTTTTTTTaaaaatg > 1:1383665/1‑138 (MQ=255) tttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTAATTTATCCCGTAAAATAAAGAAAGCTGCCAATAAAACAAAT‑AATGTGGGGATTTATTTTTTgaaaatg > 1:613042/1‑138 (MQ=255) tttGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTCCTTTGATTTCTGCCGTAAAATAAAGAAAGGTCCCCATACAAAAAAA‑ACGGGGCGGATTTATTTTTTAAAAAgg > 2:605378/1‑140 (MQ=255) gtGTATAATAACTCCGTCCCTCACAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAAAAACT‑ACGGTGCGGATTTATTTTTTATAAAGGa < 1:1614750/139‑1 (MQ=255) tGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGGTTTTATTTTTCCCGTAAAAAAAATAAAGCTCGCAAATAAAAAAAA‑AAGGGGGGGCTTTATTTTTTAAAAATGAg > 1:2080752/1‑140 (MQ=255) aataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTGATTTCTGCCGTAAAAAAAATAAACCTCCCCAAAGAAAACATCACGG‑GGGGCGTTTTTTTTTATAAAGGAGGCggt > 1:1921227/1‑138 (MQ=255) ataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTATCCCGTAAAATAAAGAAAGCTCCCAATAAAACAAAT‑AAGGTGCGGATTTATTTTTTAAAAAGGAGTCGttt > 2:425809/1‑139 (MQ=255) ataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTAATTTGTCCCGTAAAAAAAAGAAAGCTGCCAAAAAAACAAAA‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCggtt > 1:416538/1‑137 (MQ=255) ataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTAATTTGTCCCCTAAAAAAAATAAAACACCCAAAAAAAAAAAA‑AAAGGGCGGATTTTTTTTTTAAAAAGGAGTAGttt > 1:1280467/1‑139 (MQ=255) ataaCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTAATTTGTCCCGTAAAATTAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTTTTTTTTATAAATGAGTGGTta > 2:1423371/1‑140 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 2:731298/140‑1 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 1:1100509/140‑1 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 1:1024981/140‑1 (MQ=255) aCTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTatat < 1:68658/140‑1 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTCTCCCGTAAAATAAAGAAAGCGGCCCAGACAACAAAT‑ACGGGGCGGATTTATTTTTTAAAAATGAGTGGGTTTAtt > 2:1823834/1‑140 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAATGAGTCGTTATAtt > 2:384106/1‑140 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATAtt > 2:447459/1‑140 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATAAAAAAAAA‑AAGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATAtt > 2:447440/1‑140 (MQ=255) cTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTCATTTAATTTATCACGTAAAATTAAGAAATAACCCCATACAACAAAA‑AAGGGTGGGTTTTATTTTTTTAAAAGGATTCggtttaat > 1:964929/1‑133 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTTCGTTGATTTGTCCCGTAAAAAAAAGTAATCTCCCCATAAAAAAAAA‑AAGGGGCGGGGTTATTTTTTTTAAATGAGGGGTTTTAtttt > 1:554626/1‑139 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTGATTTGTGCCCTAAAATAAAAAAAACGACCAAAAAAACAAAA‑AAGGTGCGGGGTTTTTTTTTTTAAAGGAGTCGttttttttt > 1:1154706/1‑139 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTGATTTGTCCCCGAAAAAAAAGAAAACTCCCCAAAAAAAAAAA‑ACGGGGGGGCTTTTATTTTTTAAAAGGAGTCGGTttatatt > 1:850154/1‑137 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTCATTTCTCCCGTAAAAAAAAGAAACCGCCCAAAACAAAAAAA‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGttgtgtcgc > 2:950429/1‑133 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTg < 2:1730684/140‑1 (MQ=255) ccTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTTCTTTGATTTGTCCCCTAAAATAAAGAAAACTCCCCAAAAAAAAAAA‑AAGGGGCGGGGTTTTTTTTTTAAAAAGAGTGGTTTTAtttt > 1:1843087/1‑139 (MQ=255) cTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCTTTTGTCCCGGAAAATAAATAAATCTCCCAAAAAAACAAAA‑ACGGGGGGGATTTATTTTTTTAAAAGGTGTGGTTTTTTTTgt > 1:477348/1‑139 (MQ=255) tGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGaat > 2:1108329/1‑140 (MQ=255) gCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTCATTTCTCCCGTAAAATAAAGAAAGCTACCAATACAAAAAAT‑ACGGTGGGGATTTATTTTTTAAAAAGGAGTCGGTATATTTGaata > 2:1229188/1‑140 (MQ=255) ccTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGaataa < 2:1735128/140‑1 (MQ=255) ccTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGaataa < 2:463975/140‑1 (MQ=255) ccTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGaataa < 1:825237/140‑1 (MQ=255) aaaaCAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCAATTGTCCCGTAAAATAAAAAAATCTCCCACTAAAAAAAAA‑AAGGTGCGGAGTTATTTTTTTAAAACGAGTCGTGTTATTTGTataataat > 1:1610257/1‑138 (MQ=255) aacaacATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑Gttt < 1:605378/140‑1 (MQ=255) aacaacATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑Gttt < 1:125591/140‑1 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTCTCCCGGAAAAAAAATAAAGCTCCCAAAAAAACAAAA‑ACGGGGCGGGTTTATTTTTTTAAAAGGAGTCGGTGTTATTTTATAATA‑Ttttttaaa > 1:498258/1‑136 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTCTCCCCTAAAATAAAGAAAACTCCCCATACAACAAAT‑AAGGTGGGGGTGTATTTTTTTAAAAGGGGTGGTGTGTTTTGTATAATA‑Gtgtttaat > 1:1831322/1‑136 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAAt > 2:1191909/1‑74 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAAt < 1:1191909/74‑1 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTACGTTAATTTCTCCCCTAAAAAAAAGAAACCTCCCAATACAACAAAA‑ACGGGGGGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGTATAATA‑GTTTTaaag > 2:612215/1‑137 (MQ=255) caTACTCAACGTGTCCTCTTTTTCTCCGGTCGTGTTGCTTTGATTTGTCCCGGAAAATAAAGAAAGGGGCCAATAAAACAAAA‑AACGTGGGGGGTTTTTTTTTAAAAAGGGGTGGGGTTATTTGTATAAAA‑Ttttttaat > 1:1943388/1‑136 (MQ=255) aCTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCGGTGATTTTTCCCCTAAAAAAAAGAAACCTCCCCAAAAAACAAAA‑AAGGTGGGGGTTTTTTTTTTTAAAAAGAGTCGGTTTTTTTTTATAATA‑Atttttaagtaa > 1:1180716/1‑133 (MQ=255) aCTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTaa < 1:1108329/140‑1 (MQ=255) aCTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTaa < 1:564593/140‑1 (MQ=255) aCTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATGTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTaa < 1:1229188/140‑1 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTGATTTATCCCGTAAAATAAAGTAATGGGCCAATACAACAAAT‑ACGGTGGGGGGTTTTTTTTTAATAATGGGTGGTTTTTTTTTTATAATA‑GGTTTTAATTactg > 1:1518788/1‑137 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAag < 1:447459/140‑1 (MQ=255) tCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCGTTGAATTGTCCCGGAAAATAAAGAAAGCGCCCCAAACAACAAAA‑ACGGTGCGGATTTAATTTTTTAAAATGAGTCGTTGTAATTTAATAAAA‑GTTttaaattaaat > 2:1798878/1‑139 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTGCTTTCATTTCTCCCCTAAAAAAAAGAAAGCTCCCAATAAAAAAAAT‑ACGGTGCGGCTTTATTTTTTAAAAAGGGGGAGTTTTTTTTGTATAAAATGTTTTAC‑TTAAagca > 2:1862704/1‑140 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTGCGTTAATTTGTCACGGAAAATAAAGAAAGCTCCCAATAAAAAAAAT‑ACGGTGGGGCTTTATTTTTTAAAAAGGGGTGGTTTTATTTGTATAATA‑TTTTTAGATTAAagca > 2:659145/1‑140 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCCTAAAATAAAGAAAGCTCCCAATACAACAAAT‑AAGGGGGGGATTTATTTTTTTAAAACGAGTCGTTATGTTTGTATAATA‑GTTTTACATTAAatca > 2:879040/1‑140 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTAATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAAGAGTGGGTATATTTTAATAATA‑TTTTTACATTAAagaa > 2:1009718/1‑138 (MQ=255) aaCGTGTCCTCTTTTTCTCCGGTCGTTTTACGTTGATTTCTCCCGTAAAAAAAATAAATCTCCCAATAAAACAAAT‑ACGGGGCGGGTTTATTTTTTTAAAAGGCGTCGTGTTATTTTGATAATG‑GTTTTAAATTTAagca > 2:363326/1‑140 (MQ=255) gtgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAgcagca < 2:531940/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 2:424235/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 2:1052096/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 1:2009077/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 2:1979940/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 1:388184/140‑1 (MQ=255) tgtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCaa < 2:937289/140‑1 (MQ=255) gtCCTCTTTTTCTCCGGTCGTTTTGCGTTGATTTCTCCCGTAAAATAAAGAAAGCTCCCCATACAAAAAAT‑AAGGGGCGGGTTTATTTTTTAAAAAGGAGTGGGTATTTTTGTATAATA‑GTTTTTCATTAAATCAGCAAt > 2:744884/1‑140 (MQ=255) gtCCTCTTTTTCTCCGGTCGTTTTGATTTAATTTATGCCGTAAAATAAAGAAATCTCCCAATACAAAAAAA‑ACGGTGGGGTTTTATTTTTTTAAAATGAGTGGTTATATTTTTATAATA‑TTTTTTGATTAAAGGGGCaag > 2:743995/1‑139 (MQ=255) gtCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCAAt < 2:1279202/140‑1 (MQ=255) ctTTTTCTCCGGTCGTTTTGCGTTGATTTTTGCCGTAAAATAAATAAAGCTCCCCATAAAACAAAA‑ACGGTGCGGGTTTATTTTTTTAAAATGAGTCGGGATTTTTGTATAATA‑TTTTTTCATTTAATAAGAAAAGGttg > 1:1541437/1‑139 (MQ=255) ctTTTTCTCCGGTCGTTTTACATTCATTTATACCCTAAAATAAAGAAAGCTACCAATACAAAAAAT‑AAGGTTCGGATTTATTTTTTAAAAACGATACGGTCAATTTGAATAATA‑AATTTACAATAAAACAGACAAGGTTc > 2:196254/1‑140 (MQ=255) ttttCTCCGGTCGTTTTCCTTTCATTTGTCCCGTAAAATAAATAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTTAATAATA‑TTTTTAAATTAAAGCAGCAATGGTTCgg > 2:427288/1‑140 (MQ=255) ccGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAatat < 2:1541437/140‑1 (MQ=255) gTCGTTTTGCTTTGATTTATCCCGTAAAATAAAGAAAGCTCCCAATAAAAAAAAT‑AAGGTGCGGATTTTTTTTTTAAAAATGAGTCGTTAAATTTGTATAATT‑CTTTTTCATTAAATAAGCTAGGGTTGTGGaaaaaacg > 2:1830268/1‑134 (MQ=255) gTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCg < 1:429453/140‑1 (MQ=255) gTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGaaa < 2:1943388/140‑1 (MQ=255) gTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAG‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATATGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGaaa < 1:427288/140‑1 (MQ=255) gTTTTCCTTTCATTTCGCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTACAGCAGCAATGGTTCGGGAATATCCGaaa < 1:169863/140‑1 (MQ=255) | GTTTGAGCCATTATTTTCTTCATCATAGATCTTGCGTATTTGATCAAAATTTAATATGATACTCTTTGTATAATAACTCCTTGCCTCAAAACAACATACTCAACGTGTCCTCTTTTTCTCCGGTCGTTTTCCTTTCATTTCTCCCGTAAAATAAAGAAAGCTCCCAATACAACAAAT‑ACGGTGCGGATTTATTTTTTAAAAAGGAGTCGTTATATTTGAATAATA‑GTTTTACATTAAAGCAGCAATGGTTCGGGAATATCCGAAA > NZ_CP034943/176884‑177148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |