| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP034943 | 804,480 | (T)8→7 | intergenic (+49/‑146) | EO946_RS04095 → / → EO946_RS04100 | general stress protein/pectate lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 804,473 | 0 | T | . | 98.2% | 812.5 / 6.1 | 168 | intergenic (+42/‑153) | EO946_RS04095/EO946_RS04100 | general stress protein/pectate lyase |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base . (72/93); total (73/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 176 total aligned reads displayed.
GATGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGTTTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAATATAATCTCACAAAATAGAAAA > NZ_CP034943/804342‑804609 | gATGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGtttttttgc < 1:1890915/140‑3 (MQ=255)gATGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGtttttttgc < 2:2435326/140‑3 (MQ=255)gATGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGtttttttgc < 2:241587/140‑3 (MQ=255)gATGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGtttttttgc < 1:634720/140‑3 (MQ=255)gATGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGtttttttgc < 2:1061241/140‑3 (MQ=255) tGAAGCCGCTCAATTCGAACATCGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGtttttttgcgg < 1:2066332/140‑5 (MQ=255) tGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGtttttttgcgg < 1:1347491/140‑5 (MQ=255) cGCTCAATTCGAATAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAATAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:550082/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:2224013/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:2497563/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:228765/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:2461431/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1085365/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1140239/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1322836/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1470730/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1596505/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1817065/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1841873/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 1:1471634/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:692616/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 1:1963022/140‑1 (MQ=255) cGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCGTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:1451072/140‑1 (MQ=255) cGCTCAATTAGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGCCCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:376384/140‑1 (MQ=255) cGCCCAATTCGAAAAACCTTTAGAGGAAGGGAAAGTGCTTCTCGTTGTGACCGCTAATGAAAAAGTGAAAGCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTGCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:2163722/140‑1 (MQ=255) cTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:2015633/138‑1 (MQ=255) cTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCg > 1:1144307/1‑140 (MQ=255) cTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGAAGGGATATAACCCAAAACGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCg > 2:1631306/1‑140 (MQ=255) cAATTCGAAAAAAGTTTAGATGAAGGGAAAGTTCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGgt < 2:1007482/140‑1 (MQ=255) aTTCGAAAAACGTTTAGATTAAGGGAAAGTGCTTCTCTTTTTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGgtgt < 2:1198418/140‑1 (MQ=255) cGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTAtg < 1:415566/140‑1 (MQ=255) ttAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGaa < 1:1358990/140‑1 (MQ=255) tAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTT‑TTTTTTTTTTGTTTTATTTTCTGTGTATGTGtttctttat < 2:1342398/140‑8 (MQ=255) gATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGc < 1:2508771/140‑1 (MQ=255) gATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGc < 1:527259/140‑1 (MQ=255) gATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGc < 1:1441380/140‑1 (MQ=255) gAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGc < 1:568205/140‑1 (MQ=255) aGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg < 2:457993/113‑1 (MQ=255) aGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTg > 1:457993/1‑113 (MQ=255) aGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCaa < 2:2674873/140‑1 (MQ=255) aGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCaa < 1:2248546/140‑1 (MQ=255) aGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGAt > 1:1525210/1‑140 (MQ=255) aGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGAt > 2:657018/1‑140 (MQ=255) cTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCg > 1:1035039/1‑140 (MQ=255) cTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCg > 1:2376237/1‑140 (MQ=255) cTTCTCGTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATCCCGCAATAAGATAGCg > 1:2256260/1‑140 (MQ=255) ctcgTTGTGACCTATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGGATGTGTTGCAGAATGCCGCAATAAGATCGCGGaa > 2:21524/1‑140 (MQ=255) tgtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAttt > 1:1819894/1‑140 (MQ=255) tgtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAttt > 1:2488701/1‑140 (MQ=255) tgtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAttt > 2:734331/1‑140 (MQ=255) gtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAtttt < 1:657018/140‑1 (MQ=255) gtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAtttt < 2:697350/140‑1 (MQ=255) gtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAtttt < 2:737302/140‑1 (MQ=255) gtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAtttt < 2:1668886/140‑1 (MQ=255) gtgACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACAtttt < 2:1986945/140‑1 (MQ=255) cGATAATGAAACAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCACTAAGATAGCGGAACATTTTCGGtt < 2:2692784/140‑1 (MQ=255) agaaTGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAATATAGCGGAACATTTTCGGTTCt > 1:1600028/3‑140 (MQ=255) aTAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCt > 1:1430822/1‑140 (MQ=255) aTAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCt > 1:1107973/1‑140 (MQ=255) aaTCCTGGGCATAATGCAGGGATATAACCCAACAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAAtt < 1:828529/140‑1 (MQ=255) aaTCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAAtt < 1:748750/140‑1 (MQ=255) tCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTg < 1:1194722/140‑1 (MQ=255) tCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTg < 2:174461/140‑1 (MQ=255) aaTGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTAt < 2:1186633/68‑1 (MQ=255) aGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTtgt > 2:2502102/1‑140 (MQ=255) aGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTtgt > 2:2388430/1‑140 (MQ=255) aGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGATTCTGGATGTCCCTCAATTTGCTATCATATCTTtgt > 2:2626180/1‑140 (MQ=255) gggATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTtgtg < 2:842641/140‑1 (MQ=255) ggATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGgtgt < 1:2499203/59‑1 (MQ=255) ggATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTga > 1:2733693/1‑140 (MQ=255) ggATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTga > 1:1210951/1‑140 (MQ=255) ggATATAACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCCGTCTGTGGGGTCTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACCTTTTCGGTGCTGGATGTCCCTCAATGTGCTATCATATCTTTGTga > 1:593527/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAAttt > 2:325966/1‑117 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAAttt < 1:325966/117‑1 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 2:1062416/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt < 1:2121522/140‑1 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 2:1536880/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 2:2780562/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 2:2741784/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 2:1888725/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 2:2036851/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 2:2121522/1‑140 (MQ=255) taACCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAt > 1:101561/1‑140 (MQ=255) aaCCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCTCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAtt < 1:731269/140‑1 (MQ=255) aaCCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAAtt < 2:112543/140‑1 (MQ=255) aCCCAAAAGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTg < 2:543976/140‑1 (MQ=255) aaaaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTa < 1:2447252/115‑1 (MQ=255) aaaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCg > 1:2677461/1‑89 (MQ=255) aaaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAata > 2:2705499/1‑140 (MQ=255) aaaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAata > 1:2780069/1‑140 (MQ=255) aaaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAata > 1:2453115/1‑140 (MQ=255) aaaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAata > 2:1940192/1‑140 (MQ=255) aaaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAAAATTTTCTGTTCTGGATGTCCCTCAATTTGATATCATATCTTTGTGAGAAATTGTAata > 2:315121/1‑140 (MQ=255) aaGGCCAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAatat > 1:2731624/1‑140 (MQ=255) cAACTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTTGAATATAAtct > 2:2602768/1‑140 (MQ=255) cAACTTCGGCTTTTTGGG‑‑TTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAATATAAtctc > 1:433575/1‑140 (MQ=255) aaCTTCGGCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAATATAAtctc > 1:1492646/1‑140 (MQ=255) gCTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGTAATATAATCTCACACAAt > 1:1759342/1‑140 (MQ=255) cTTTTTGGG‑TTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAATATAATCTCACAAAATa < 2:528548/140‑1 (MQ=255) tgtttttttttGCTGTCTTTGCGGTGTATGTGTTTCAGAATGCCGCAATAAGTTAGCTGAACATTTTCGGTTCTGGATGTACCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAATATAATCTCACAAAATAGaaac < 2:1803197/137‑2 (MQ=255) | GATGAAGCCGCTCAATTCGAAAAACGTTTAGATGAAGGGAAAGTGCTTCTCTTTGTGACCGATAATGAAAAAGTGAAATCCTGGGCATAATGCAGGGATATAACCCAAAAGGCCAACTTCGGCTTTTTGGGTTTTTTTTGCGGTCTTTGCGGTGTATGTGTTGCAGAATGCCGCAATAAGATAGCGGAACATTTTCGGTTCTGGATGTCCCTCAATTTGCTATCATATCTTTGTGAGAAATTGGAATATAATCTCACAAAATAGAAAA > NZ_CP034943/804342‑804609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |