| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,562,015 | A→C | 7.8% | intergenic (‑661/‑137) | EO946_RS18300 ← / → EO946_RS21105 | response regulator/HAMP domain‑containing histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,562,015 | 0 | A | C | 7.8% | 1056.6 / 6.5 | 419 | intergenic (‑661/‑137) | EO946_RS18300/EO946_RS21105 | response regulator/HAMP domain‑containing histidine kinase |
| Reads supporting (aligned to +/- strand): ref base A (245/111); new base C (4/53); total (249/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 421 total aligned reads displayed.
ATCAGCACGTCGTTTATTTACAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAATC > NZ_CP034943/3561879‑3562151 | aTCAGCACGTCTTTTATTTACAGTGCAAATCGCATCTATTTTAATGGACAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑ggg < 2:2488288/140‑1 (MQ=255) gtTTATTTACAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAAc < 2:4138490/140‑1 (MQ=255) gtTTATTTACAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAAc < 2:2627872/140‑1 (MQ=255) tatttaCAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTtg < 1:4216396/140‑1 (MQ=255) atttaCAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTtgt > 1:1383841/1‑140 (MQ=255) cAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTAc < 1:349542/140‑1 (MQ=255) cAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTAc < 2:7743610/140‑1 (MQ=255) gTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACaa > 1:7705951/1‑140 (MQ=255) gTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACaa > 2:3722149/1‑140 (MQ=255) gTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACaa > 1:5262744/1‑140 (MQ=255) tGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATATCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAAt > 2:4005849/1‑140 (MQ=255) tGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAAt > 2:7125342/1‑140 (MQ=255) tGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTCTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAAt > 1:5474723/1‑140 (MQ=255) cAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTtg > 2:4578634/1‑129 (MQ=255) cAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAAttt > 2:1389974/1‑140 (MQ=255) aTCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCa > 2:7090547/1‑140 (MQ=255) aTCTATTTTAATGGCCCATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACATGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAAATTGTGGTAGACTTTTCAAACtt > 1:1817029/1‑140 (MQ=255) aTCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAAGCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAATCtt > 1:4519277/1‑140 (MQ=255) aTCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACtt > 1:3024640/1‑140 (MQ=255) aTCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGGGGTACAATTTTCAAACtt > 1:5981621/1‑140 (MQ=255) aTCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGAGTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACtt > 1:616272/1‑140 (MQ=255) ttttAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGaa < 2:10328/140‑1 (MQ=255) tttAATGGCCAATTAATAGCACAAAGCGGAAGCCCTTCAAATAAACATGATTTTATAGCGAAAAACACACCATATACGACCTTTTTTACGCTTCACAA‑GGTTTACAATGAACTTGTGGTACAATTTTCAAACTTCGGaaa < 2:2381655/140‑1 (MQ=255) aTGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGAGCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACTATTTTCAAACTTCGGAAAAACg > 2:7426589/1‑140 (MQ=255) tGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGc < 2:1290168/140‑1 (MQ=255) tGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACACACCATATACGCGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGc < 2:3305144/140‑1 (MQ=255) gCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCg > 1:2787371/1‑140 (MQ=255) aTAGGACAAAGCGGAACCCCTTCAAATAAACCTGATTTTATTGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTgggg < 2:5323560/140‑1 (MQ=255) aGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTAGGAAAAACGCCGGGGTGGGGaa > 2:6108536/1‑140 (MQ=255) ggACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTGTTTACGCTTCACAC‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAATAACGCCGGGGTGGGGAAt > 1:6969975/1‑140 (MQ=255) gACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATc > 2:6411877/1‑140 (MQ=255) aaaGCGCAAGCCCTTAAAAAAAACGTGTTTTTATAGCGAAAAACACACCATATACGAGGTTTTTTACGCTTCACAC‑GGGTGACAATGAAGTTGTGGTAAAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCa < 1:6402823/140‑1 (MQ=255) aGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACTCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGTACTCGaaaa > 1:3196252/1‑140 (MQ=255) aGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACACTTTTCACACTTCGGAAAAACGCCGGGGGGGGGAATCGCaaa > 2:4375195/1‑140 (MQ=255) aGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCaaa > 1:5048754/1‑140 (MQ=255) aGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCaaa > 1:3384273/1‑140 (MQ=255) aGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCaaa > 1:7268342/1‑140 (MQ=255) aaGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGa > 2:119885/1‑140 (MQ=255) aaGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGa > 1:4613343/1‑140 (MQ=255) cccccTTAAAATAAACCTGTTTTTATAGCCCAAACCACACCATAAACGAGCTTTTTCCCGCTACAACT‑GGGTCACATTCACCTTGTGTTACATTTTAAAAACTTCGCAAAAACGCCGGGGTGGGGAATCGCAAAGCCGAt < 1:2607377/138‑1 (MQ=255) ttCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACtt > 2:3812181/1‑140 (MQ=255) tCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGCATCGCAAAGCCGATTACttt > 1:6603562/1‑140 (MQ=255) tCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACttt > 1:397223/1‑140 (MQ=255) aaaTAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAAGGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTg < 2:511479/140‑1 (MQ=255) aaaTAAACCTGATTTTATAGCGCAAAACACACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTg < 2:736679/140‑1 (MQ=255) tAAACCTGTTTTTATCGCGAAAAACACACCATCGAGGAGCTTTTTTACTCTT‑ACAACCTGTGACAATGTAGTTGTGTTACAATTTTCACAATTCGTAACAACGCCGGGGTGGGGAATCGCAAAGACGATTACTTTTGTaa < 2:6216578/140‑1 (MQ=255) accctttttttATAGCGAAAAACACACAATATACGCGCTTTTTTACGCTTCACAC‑GGGTGAAAATTAACTTGTGTTAAAATTTAAAAACTTCGCAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:3267667/133‑1 (MQ=255) acccTTATTTTATAGCCAAAAACCCACCATATACGCGCTTTTTTACGCTACACAC‑GGGTGACATTGAAGTTGTGGTACAATTTTCAAACTTCGCAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:1075534/138‑1 (MQ=255) acccTGATTTTATCGCGCAACACACACCATAGACGAGCTTTTTTACGCTTCACAC‑GGGTCACAATCAACTTGTGGTACAATTTACAAACTACGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:3814966/138‑1 (MQ=255) aaactttttttATCGCGAAAAACAGAACATAAAAGTGATTTTTGACGATTCACAC‑GGGTGACAATGAATTTTTGGTACATTTTAAAAACTTCGTAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:3527793/133‑1 (MQ=255) aaCCTTTTTTTATAGCCCAAACCACACCATATACGAGCTTTTTTACGCTTCACAA‑GGTTGACAATGAATTGTTGGTACACTTTTCAAACTTCGCAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:3098455/140‑1 (MQ=255) aaCCTTTTTTTATAGCCAAAAACCCACCTTATACGCGATTTTTTACGCTACACAC‑GGGTGACAATGAACTTGTGGTACAATTTTCAACATTCGTAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:3658935/140‑1 (MQ=255) aaCCTTATTTTATAGCGCAAAACACCCCATATCCGCGCTTTTTTACGCTTCACAC‑GGGTCACAATGAAGTTGTGGTAAAATTTCCAAACTTCGCAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:6126416/140‑1 (MQ=255) aaCCTTATTTTATAGCGCAAAACACACCATATACGCGATTTTTTACGCTTCACAC‑GGGTGACATTGAACTTGTGTTACAATTTACAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 2:5476967/140‑1 (MQ=255) aaCCTGTTTTTATAGCGCAAAACCCACAATATACGAGCTTTTTTACGCTTCAACA‑GGGTGACAATGACCTTGTGTTACAATTTTCAACCTTCGCAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:5124824/140‑1 (MQ=255) aaCCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGACTCGCAAAGCCGATTACTTTTGGAACg > 1:3618622/1‑140 (MQ=255) aaCCTGATTTTATAGCCCAAAACACACCATATAGGACTTTTTTTACGCTTCACAC‑GGGTGACAATGAAGTTGGGGTAAAATTTTCAAACTCCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACg < 1:6282513/140‑1 (MQ=255) aCCTGATTTTATTGCGCAAAACACACAATATACGAGCTTTTTTCCGCTTCACAA‑GGGTGACAATGAACTTGTGGTAAATTTTACAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGc < 1:1566459/140‑1 (MQ=255) aCCTGATTTTATACCCCAAACCCCACCTTATCCGCGTTTTTTCCCGCTTCACCC‑GGGTGACAAGCACGTTGGGGTACAATTTACAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGc < 1:673478/140‑1 (MQ=255) ccTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCa > 2:1561419/1‑140 (MQ=255) tttttttATAGCGAAAAACAGACAATATACGAGATTTTTTACGCTTCACAC‑GGGTGAAATTTAACTTGTGGTACAATTTTAAAACTGCGTAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAgg < 1:5834667/137‑1 (MQ=255) ttaTTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAC‑GGGTGACAATGAAATTGTGGTACAATTTTCAAAATTCGTAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAgg < 2:4921533/138‑1 (MQ=255) taTTTTATAGCGAAAAACAGACCATTGACGCGCTTTTTTCCGTTTCACAT‑GGGTGACAATTAACTTTTGTTACAATTTTCAAACTTCGTAAACACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGa < 2:88814/139‑1 (MQ=255) gATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGTAACGCAGGa > 1:6857828/1‑140 (MQ=255) gATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGa > 1:4985972/1‑140 (MQ=255) aTTTTATAGCGCAAACCAGCCCATATACGAGCTTTTTTACGCTTCACCA‑GGGTGACAATGAACTTGTGGTACCATTTTCAACCTTGGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGAt < 2:5533968/140‑1 (MQ=255) aTTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACCCTGAACTTGTGGTACAATTTTCAAACTTCGGACAAACGCCGGGGTGGGGAGTCGCAAAGCGGATTACTGTTGGACCGCAggct > 2:4492947/1‑138 (MQ=255) cAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAAGATATTGCg > 2:4386139/1‑140 (MQ=255) aacaccgACCATATCCGAGATTTTTTACGCTTCACAA‑GGGTTAAAATCAACTTTTGGTACATTTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCga < 2:6936245/134‑1 (MQ=255) cacaCCATATACTCGCTTTTTTACGCTTCACAC‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGCAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCgagaga < 1:7354974/137‑1 (MQ=255) aCCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACa > 2:3578676/1‑140 (MQ=255) aCCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACa > 1:2143322/1‑140 (MQ=255) aCCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACa > 1:7398671/1‑140 (MQ=255) ataCGAGCTTTTTTACGCTTCACAA‑GGGTGACAATTAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAAtt > 1:2295376/1‑140 (MQ=255) ataCGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGaa < 2:6778821/108‑1 (MQ=255) ataCGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCTAGAGAACAAAAtt > 1:1199592/1‑140 (MQ=255) ataCGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAAtt > 1:1311814/1‑140 (MQ=255) ataCGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAAtt > 1:5569516/1‑140 (MQ=255) ataCGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCCATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAAtt > 1:1492790/1‑140 (MQ=255) aGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCtt > 1:2554144/1‑140 (MQ=255) aGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCtt > 1:4123974/1‑140 (MQ=255) cTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTAGAATTTTCAAACTTCGGAAAAACGGCGGGGTGGGGAATCGCAAAGCCGATTAGTTTTGGAACGCAGGATAACATATTGCGAGAGACGAAAATTTCCTTTc > 2:7518367/1‑140 (MQ=255) cTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAAc > 1:7043764/1‑102 (MQ=255) cTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTc > 1:7185908/1‑140 (MQ=255) cTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTc > 2:566968/1‑140 (MQ=255) cTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAAAATATTGCGAGAGAACAAAATTTCCTTTc > 1:4823141/1‑140 (MQ=255) cTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAAAGCCGGGGGGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTc > 1:5698450/1‑140 (MQ=255) cTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGCTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCCCAAAGCCGATTACTTATGGAAGGCATGATAACATAATGCGAGAGAAAAAAATTTCCTTTc > 2:3116379/1‑140 (MQ=255) tttttACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCtt > 2:2769945/1‑140 (MQ=255) tttttACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCtt > 2:7672531/1‑140 (MQ=255) ttttACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTa > 1:2049045/1‑140 (MQ=255) tttACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAACCTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTaa < 2:180571/140‑1 (MQ=255) cGCTTCACCA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGAt < 2:5269474/140‑1 (MQ=255) gCTTCACAC‑GGGTGACAATGAAGTTGTGGTACAATTTACAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGAtt < 1:1731492/140‑1 (MQ=255) cacaC‑GGGTTACAATGAACTTGTGTTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAAt < 2:2143808/140‑1 (MQ=255) cacaA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAAt > 1:4374324/1‑140 (MQ=255) cacaA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAAt > 1:819261/1‑140 (MQ=255) cacaA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAAt > 1:2355693/1‑140 (MQ=255) cacaA‑GGGTGAAATTGAAGTTTTGGTACATTTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAAt < 2:6342573/140‑1 (MQ=255) acaA‑GGGTTACAATTAACTTGTGGTAAAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAATc < 2:5048754/140‑1 (MQ=255) | ATCAGCACGTCGTTTATTTACAGTGCAAATCGCATCTATTTTAATGGCCAATTAATAGGACAAAGCGGAAGCCCTTCAAATAAACCTGATTTTATAGCGCAAAACAGACCATATACGAGCTTTTTTACGCTTCACAA‑GGGTGACAATGAACTTGTGGTACAATTTTCAAACTTCGGAAAAACGCCGGGGTGGGGAATCGCAAAGCCGATTACTTTTGGAACGCAGGATAACATATTGCGAGAGAACAAAATTTCCTTTCTTAATGATTCAATC > NZ_CP034943/3561879‑3562151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |