| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,790,777 | C→A | 9.4% | L198L (CTG→CTT) | EO946_RS19525 ← | BglG family transcription antiterminator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,790,777 | 0 | C | A | 9.4% | 1318.7 / 11.8 | 518 | L198L (CTG→CTT) | EO946_RS19525 | BglG family transcription antiterminator |
| Reads supporting (aligned to +/- strand): ref base C (13/388); new base A (51/2); total (127/391) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 518 total aligned reads displayed.
AGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCCGCG > NZ_CP034943/3790640‑3790914 | gacaggATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGa < 1:4243866/135‑1 (MQ=255) atatGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACTGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGAt < 2:5406517/140‑1 (MQ=255) tCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGa < 1:1472670/140‑1 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGCTGCGGTCGTGTTTAATTTTTTTTAGGTTGgggggagc > 1:2182472/1‑136 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGATTTTTTTAAGGCTGGCGGGACg > 2:480522/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTACATTTTTTAAGGATGGCGGACCg > 2:857308/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAATTTTTTTAAGGATTGCGGAACg > 2:7159505/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTGTGAAATTTTTTTAGGAAGGCCGaagg > 1:5653311/1‑138 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGTTTTTTTTTATGTTGGGGGGACg > 1:6631856/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTGAGGTTGggggtaag > 2:3989904/1‑136 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTCATTTTTTTAAGGATGGCGGAACg > 2:3595370/1‑140 (MQ=255) tCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGATTTTTTTGAGGGTGGGGGAAAGgatgat > 2:383922/1‑140 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAATTTTTTTGAGGATTTCGGAAAGgaagata > 2:4140007/1‑139 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAATTTTTTTGAGGATGGCGGAACCgatgata > 2:3501810/1‑139 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTGATGATGGCGGAACGGATTAtc > 2:1687824/1‑140 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTAATTTTTTTCAGGATGGCGGAACCgatgata > 2:7057857/1‑139 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTGATTTTTTTTAGTGTGGGGGAACGggtggtg > 1:2382387/1‑137 (MQ=255) gggAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTGATTTTTTTAAGGATGGCGGCAAGGATTAtcta > 2:2806288/1‑139 (MQ=255) aaaGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGAtt < 2:1976046/140‑1 (MQ=255) aTACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAATGATTGCGGAAAGGATGATCTAGATttattaa > 2:5518796/1‑138 (MQ=255) ttttGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGATGGGGGAAAGGGTGATCTAGATTTATTCAATTTggga > 1:1184579/1‑138 (MQ=255) cGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAatat < 1:5059509/140‑1 (MQ=255) tCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAg < 2:4516849/140‑1 (MQ=255) gATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCt < 2:4678311/140‑1 (MQ=255) gATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCt < 2:2322176/140‑1 (MQ=255) gTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTttca < 1:5411950/140‑1 (MQ=255) ttACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTttcatt < 1:4014865/140‑1 (MQ=255) ttACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTttcatt < 1:5267935/140‑1 (MQ=255) cgatagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACa < 1:1411939/140‑1 (MQ=255) cgatagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACa < 2:3281384/140‑1 (MQ=255) atagcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTGTTTTTTTTTATGTTTTGGGAACGGATGATATCGATTTATTG‑ATTTTTGAAAAAATAAGCCTATTGAATAAGaaaaaa > 1:673535/1‑136 (MQ=255) agcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGGATTTTTTAAGGGTGGGGGGGCCGGTGTTGTCGATTTGTTT‑ATTTGGGCAAAGATAACCCATTTAATTAAGAAAATCaa > 1:3861318/1‑140 (MQ=255) gcgataTGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAAt < 1:1805366/140‑1 (MQ=255) tatGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTGAGGATGGGGGACCCGATTATCTCGATTTTTTG‑AATTTGGAAAAAATAAGCCTTTTGATTAAGAAAAACAAtatgc > 1:3648624/1‑136 (MQ=255) tGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:1085382/140‑1 (MQ=255) gggATGCTGAGGTTATTCAGTCCCAAGGTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:832948/139‑1 (MQ=255) tgatgaGGTTATTCAGTCCCAAGTTTGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTtct < 2:6022410/140‑1 (MQ=255) tgatgaGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTtct < 1:768237/140‑1 (MQ=255) atgaGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAATTTTTTTCAGGATTGCGGAACGGCTTATATCCCTGTATTG‑ATTTTGGAAAAAATAAGCCATTTAATTAGGCACATCAAAATCACTTtctcg > 2:426787/1‑139 (MQ=255) gTTATTCAGTCCCAAGTTGGAGAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:6289585/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:1925694/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:3237236/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:7550945/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAATTTTTTTGAGGATGGCGGAACCGAATATATAGATTTGTTC‑ATTTGGGAAAATATGAGCCGTTTCATTAAAAAAAAAAAACTCCGGTTGTCTTTCAt > 2:1781841/1‑140 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGAGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:153898/140‑1 (MQ=255) gTTAGTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:5470428/140‑1 (MQ=255) ttATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAAATTTTTTGAGGGTGGGGGAAAGGCTGGTATAGATTTATTC‑ATTTTGGAAAAAATCAGCCTTTTCAATAAGAACAACAAACTCCGTGTGTCTTTGAta > 2:6146402/1‑139 (MQ=255) aTTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGa < 2:2107866/140‑1 (MQ=255) tCAGTCCCAATTTTGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATTATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:1161797/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:1395771/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:1212628/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 1:2806288/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTAGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 1:2552952/140‑1 (MQ=255) tCAGTCACAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:6938232/140‑1 (MQ=255) cccATGTTGGTCAGAGGGATGTGGTCGTTTTTCATTTTTTTGAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTTGCAAATTATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 2:3132164/140‑1 (MQ=255) cccAAGTTGTACATAGTGATGCGTTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 2:37765/140‑1 (MQ=255) cccAAGTTGGAGAGAGGGTTGCGGTCGTTTTTAATTTTTTTCAGGAGGGCGGAACGGTTGATATCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAAGATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:742995/140‑1 (MQ=255) cccAAGTTGGACATATGTATTAGTTCTTTTTTCATTTTTTTCAGGATGGATTAACGGATTATCTCGATTTCTTC‑ATTTGTCAAAATATCAGCCTTTTCATTAATAACATAAATTTAATTTTATATTTCATCGACAATGTa < 2:6631856/140‑1 (MQ=255) cccAAGTTGGACAGAGTGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:6459367/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCTGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 2:4363742/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGTATGGAGGAACTGATGATATCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 2:4924642/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:210511/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:7159505/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:1317969/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:6566970/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAGCATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 2:6242988/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 1:5822734/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 2:5652029/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 1:3313391/140‑1 (MQ=255) agacagggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 1:600777/134‑1 (MQ=255) aGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAAGGTTTGCGGAAAGGATTTTTTAGATTTAGTA‑ATTTGGCCAAATATCAGCCTTTTAATTAAGAACATCAAAAAACGGTTGTCTTTCATGGAAAAAGTAccca > 2:7571967/1‑137 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 2:1844359/140‑1 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 2:78024/140‑1 (MQ=255) cttGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCGTC‑ATTTGGCACACTATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:1996063/139‑1 (MQ=255) tGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGcc < 1:2967449/140‑1 (MQ=255) tGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGcc < 2:2604579/140‑1 (MQ=255) tGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGcc < 2:5286903/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 2:572096/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 1:7041690/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 2:5684903/140‑1 (MQ=255) cagtgcgATGCGGTCGTTTTTCATTTTTTACAGGATGGCTGAACGGATGATCTCGATTTCGTC‑ATTTGGCAAAATATCAGCCTTTTCAGTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 1:5867848/134‑1 (MQ=255) cAGAGGGTTGCGGTCGTTTTTCATTTTTTTCAGGATGGCGTAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:5178351/140‑1 (MQ=255) cAGAGGGATGCTGTCTTTTTTCATTTTTTTCAGGATGGCGTAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:5857877/140‑1 (MQ=255) ggATGCGGTCTTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:2494075/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCCGGCTGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:3023635/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 1:3749992/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 1:3471032/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:4051295/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 1:4849076/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATCGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 1:5536383/140‑1 (MQ=255) tCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTg < 1:4097250/140‑1 (MQ=255) cATTTTTTTCAGGATGGCGGAACGGATTATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGt < 2:6758361/140‑1 (MQ=255) cATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGt < 2:2395422/140‑1 (MQ=255) ttttCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTc > 1:6855228/1‑106 (MQ=255) ttttCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCcg > 1:3570930/1‑140 (MQ=255) ttttCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCcg < 1:1630884/140‑1 (MQ=255) ttCAGGCTGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAAGGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCcgcg < 1:2677296/140‑1 (MQ=255) ttCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCcgcg < 1:4587006/140‑1 (MQ=255) ttCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCcgcg < 2:6514676/140‑1 (MQ=255) ttCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCcgcg < 1:4392930/140‑1 (MQ=255) | AGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTC‑ATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTGCACCTCGTCCCCGCG > NZ_CP034943/3790640‑3790914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |