BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	3,851,254	G→C	6.2%	L41V (CTT→GTT)	EO946_RS19820 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	3,851,254	0	G	C	6.2%	1123.7 / 10.4	511	L41V (CTT→GTT)	EO946_RS19820	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (343/122); new base C (11/30); total (359/152)
Fisher's exact test for biased strand distribution p-value = 3.19e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 541 total aligned reads displayed.

CTCTGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAG  >  NZ_CP034943/3851115‑3851393

ctctGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAg                                                                                                                                             >  1:4212563/1‑140 (MQ=255)

 tctGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAACCATAACCTTCAAAGTACTCGGACATGTCTTCTATAAATGAACCAGTCGTTAATACCTG‑TATCATGATTAGATCGTaagcaagc                                                                                                                                            >  2:381885/1‑140 (MQ=255)

   tGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGccc                                                                                                                                          >  1:2735548/1‑140 (MQ=255)

   tGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGccc                                                                                                                                          >  1:6725229/1‑140 (MQ=255)

   tGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGccc                                                                                                                                          >  2:7265532/1‑140 (MQ=255)

   tGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGccc                                                                                                                                          >  2:2810302/1‑140 (MQ=255)

    gTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCt                                                                                                                                         >  1:4703549/1‑140 (MQ=255)

        tatGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTAGATCGTATGCAAGCCCTTccc                                                                                                                                     >  2:1443403/1‑140 (MQ=255)

           ggATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaa                                                                                                                                  <  1:7478027/140‑1 (MQ=255)

           ggATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaa                                                                                                                                  >  2:649894/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATTCAAGCCCTTCCCaaaaa                                                                                                                                >  1:5404821/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  1:7396197/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  1:164589/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  2:4141081/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  1:3325534/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  1:3480156/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaa                                                                                                                                  <  2:2962456/138‑1 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATAGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  2:7694459/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATAGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  2:2446818/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCGG‑TATCATGATTAGATCGTATGCAAGCCCGTCCCaaaaa                                                                                                                                >  1:2925108/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCAG‑TATCATGATTCGATCGTATTCAACCCCTTACCaaaaa                                                                                                                                >  2:4736869/1‑140 (MQ=255)

             aTTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACACGGACAGGTCTTCTATAAATGAACCATTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCaaaaa                                                                                                                                >  2:5970000/1‑140 (MQ=255)

               tGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACg                                                                                                                              >  2:5780211/1‑140 (MQ=255)

               tGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGGTCTTACCTG‑TATCATGATTCGATCGTATGCAACCCCTTCCCCAAAACg                                                                                                                              >  1:286124/1‑140 (MQ=255)

                            ctctTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGActct                                                                                                                 >  2:5176350/1‑140 (MQ=255)

                               ttttCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGGTATTACCTG‑TATCATTATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTATGct                                                                                                              >  1:4403613/1‑140 (MQ=255)

                                  tCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAAAGACTCTGcttct                                                                                                           >  1:4120376/1‑140 (MQ=255)

                                  tCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATAATGATTAGATCGTATGCAAGCACTGACCAAAAAACATAAAACTAATCAGcttct                                                                                                           >  1:522242/1‑140 (MQ=255)

                                  tCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCAG‑TATCATGATTCGATAGTATTCAAGCCCTTCCCAAAAACCATAAAACGAATCTGcttat                                                                                                           >  1:3974645/1‑138 (MQ=255)

                                           ttATCACATTTTAAGAATAACATTCAAAGTACTCGGACTGTTATTATATAAATCAACCCGTGGTTATTACCTT‑TATCTTTATTCGATCGTATGCAACCCATACCAAAAAACGATAACACGACTCTGCTTCTTCAAGTTCg                                                                                                  <  2:6137307/140‑1 (MQ=255)

                                           ttATAACTTTTTAACAATAACCTTAAATGTACTCGCACTTGTATTATATAAATCAACCATTCTTTTTTACCTG‑TATATTGATTCGATCGTATGCAAGCCCTTCCAAAAACCGAAAACACGACTCTGCTTCTTCAAGTTCg                                                                                                  <  2:3058905/140‑1 (MQ=255)

                                                  cTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACa                                                                                           >  2:4911302/1‑140 (MQ=255)

                                                  cTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTACCAAAAACGATAAAACGACTCTGCTTATTCAAGTTCGCAAGACa                                                                                           >  2:6708837/1‑140 (MQ=255)

                                                   ttGTGAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAACTTCGCAATACaa                                                                                          >  1:7223613/1‑139 (MQ=255)

                                                   ttGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATTCAAGCCCTTCCCAAAAACGATAAAAAGACTCTGCTTCTTCAAGTTCGCAAGACAt                                                                                          >  1:3072715/1‑140 (MQ=255)

                                                   ttGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTAGCAAGACAt                                                                                          >  2:1115046/1‑140 (MQ=255)

                                                   ttGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGAAAGCCCTTCCCAAAAACGATAAAACTAATCTGCTTCTTCAAGTTCGCAAGCCAt                                                                                          >  2:4457625/1‑140 (MQ=255)

                                                            tAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTTTGCAAGCCCGTCCCAAAAACGATAAAACGCCTCTGCTTCTTCAAGTTCGCAAGACATAACACCTtg                                                                                 >  1:4505523/1‑140 (MQ=255)

                                                            tAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATCAAACGACTCTGCTTCTTCAAGTTCGCAACACATAACAACTtg                                                                                 >  2:6818086/1‑140 (MQ=255)

                                                            tAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACAtg                                                                                 >  1:3675802/1‑140 (MQ=255)

                                                            tAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAAAGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtg                                                                                 >  1:2013688/1‑140 (MQ=255)

                                                            tAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATAGTATGCAAGCCCTTCCCAAAAACGATAAAACGACACTGCTTCTTCAAGTTCGCAAGACATAACAACTtg                                                                                 >  2:357107/1‑140 (MQ=255)

                                                               ccTTCAATGTACTGGGACTGTTTTTCTATAAATCACCCAGTCTTTATTACATT‑TATATTGTTTGGATCTTATCAAAGCCCTACCAAAAACCCAAACCACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtgatg                                                                              <  1:6440954/140‑1 (MQ=255)

                                                               ccTTCAATGTACTCGGACAGGTTTTCTATAAATGAACCAGTCTTTTTTACCTG‑TATATTTTTTCGATCGTATGCAAGCCCTACCAAAAAACCAAAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtgatg                                                                              <  2:7493798/140‑1 (MQ=255)

                                                               ccTTCAAAGTACTCGCACCGGTCTTCTATAAATGAACCAGTCTTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAACCCATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtgatg                                                                              <  2:438665/140‑1 (MQ=255)

                                                               ccTTCAAAGTACCCGCACTGTTATTATATAATTCACCCCGTC‑TTTTTTCCTGTTATCATGATTCTATCGTAGCCACGCCCTCCCAAAAAACCATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtgatg                                                                              <  2:1023147/140‑1 (MQ=255)

                                                               ccTTAAAAGTACTCGTACCGTATTTATATAAATCACCCTGTGTTTTTTACTTG‑TATCTTTATTCTATCTTATGCACCCCCTCCCCAAAAACGAAAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtgatg                                                                              <  2:5500620/140‑1 (MQ=255)

                                                               ccTACAAAGTACTCGTACAGTTTTTATATAAATCAACCAGTCTTTATTCCCTG‑TATCATTATGCGATCGTATCCAACCCCTTCCCAAAAACGATAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtgatg                                                                              <  2:16965/140‑1 (MQ=255)

                                                               actccAACGTACTCGGACCTGTCTTCTATAAATCACCCCGTCTTTTTTACCTC‑TATCATGATCCGTGCGTATCCACGCCCTCCCCAAAAACAATAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTtgatg                                                                              <  2:2013688/136‑1 (MQ=255)

                                                                    aaaGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTAGTCAAGTTCGCAAGACATAACAACTTGATGATGCt                                                                         >  2:662127/1‑140 (MQ=255)

                                                                     aattACTCGCACTGTACTTCTATAAATCACCCACTCTTTATTACCTG‑TATCATTATTCGATCGTATGCACGCCCTCCCCAAAACCGATAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCtt                                                                        <  1:7685695/137‑1 (MQ=255)

                                                                          cTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCACGACATAACACAGTGATGAGGCTTAagag                                                                   >  2:4351978/1‑140 (MQ=255)

                                                                          cTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGTCATAACAACTTGATGAGGCTTAagag                                                                   >  1:5520438/1‑140 (MQ=255)

                                                                          cTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAAATTGATGAGGCTTAagag                                                                   >  1:1143379/1‑140 (MQ=255)

                                                                          cTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACGCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAagag                                                                   >  1:4968715/1‑140 (MQ=255)

                                                                                  ggTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTTATGAGGCTTAAGAGCGATCATg                                                           >  1:6076869/1‑140 (MQ=255)

                                                                                      ttctATAAATGAACCAGTCTTTATTACCTG‑TATCATGATTCTATCTTATGCAAGCCCTTCCAAAAAACCAAAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTa                                                       <  2:1274001/140‑1 (MQ=255)

                                                                                      ttctATAAATCAACCATTCTTTTTTACGTT‑TATATTGATTCGATGTTATGCAAGCCCTCCCAAAAAACGAAAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTa                                                       <  2:324824/140‑1 (MQ=255)

                                                                                       tctATAAATGAACCAGTCGTGATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTaa                                                      >  1:2113065/1‑140 (MQ=255)

                                                                                         tataAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGAAACCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACAAGATCAGGCTTAAGAGCGATCATGTCTaaaa                                                    >  2:5990025/1‑139 (MQ=255)

                                                                                          ataCATGAACCCGTGGTTATTACCTG‑TATCTTTATTCTTTGTTCTCCACCCCCTTCCCAAAAACGATAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCAGGTCTAAAtt                                                   <  2:870571/140‑1 (MQ=255)

                                                                                            aaaTCAACCAGTCGTTATTACCTT‑TATCTTTATTCGCTCGTATGCAAGCCCTTCCCAAAAACTATAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACACCTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGc                                                 <  2:3924113/140‑1 (MQ=255)

                                                                                              aTGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATTCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTAAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCg                                               >  1:623784/1‑140 (MQ=255)

                                                                                              aTGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCg                                               >  2:2583745/1‑140 (MQ=255)

                                                                                              aTGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCg                                               >  1:5794743/1‑140 (MQ=255)

                                                                                                 aaCCAGTTTTTTTTACCTT‑TATAATGATTCGATCGTATCCACGCCCGCCCCAAAAACCATACCACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATa                                            <  1:101234/140‑1 (MQ=255)

                                                                                                 aaCCAGTGTTTTTTACGTT‑TATCATGATTCGATCTTATGCAAGCCCTGCCAAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATa                                            <  2:5327741/140‑1 (MQ=255)

                                                                                                 aaCCAGTCTTTATTACCTT‑TATAATGATTCGATCTTATGCAACCCCTTCCCAAAACAGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATa                                            <  2:2526467/140‑1 (MQ=255)

                                                                                                 aaCCAGTCTTTATTACCTG‑TATCTTGATTCGATCGTCTGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATa                                            <  2:719071/140‑1 (MQ=255)

                                                                                                 aaCCAGTCGTTATTCCCTT‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAACACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATa                                            <  2:4233269/140‑1 (MQ=255)

                                                                                                  aCCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGGTTCTTCAAGTTCGCAAGTCATAACAACTTGATGATGCTTAAGAGCGATCATGTCTAAATTGCCGATaa                                           >  1:1563447/1‑139 (MQ=255)

                                                                                                  aCCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATaa                                           >  2:6967309/1‑139 (MQ=255)

                                                                                                  aCCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTAAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGATCGATCATGTCTAAATTGCCGATAc                                           >  1:2260146/1‑140 (MQ=255)

                                                                                                  aCCAGTCGTTATTACCTG‑TATCATGATTAGATCGTATGCAACCCCTTCCCAAAAACGATAAAACCACTCAGCTTCTTCAAGTTAGCAAGACATAACAACTTTATGAGGCTTAATAGCGATCATGTCTAAATTGCCGATaa                                           >  1:7031745/1‑139 (MQ=255)

                                                                                                   ccAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACt                                          >  2:6403069/1‑140 (MQ=255)

                                                                                                   ccAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACt                                          >  2:5661899/1‑140 (MQ=255)

                                                                                                            attaCCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGACCGATCATGTCTAAATTGCCGATACTGCTtatatc                                 >  2:332010/1‑138 (MQ=255)

                                                                                                            attaCCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTAGCAATACATAACAACTTTATTAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGc                                 >  2:1855902/1‑140 (MQ=255)

                                                                                                            attaCCTG‑TATAATGATTCGATCGTATGCAACCCCTTCCCAAAAACGATAAAACGACACTGCTTCTTAAAGTTCGCAAGAAAAAACAACTTGATGAGGCGTAAGAGCGATCATGTCTAAATTGCCGATACTGCTtatatc                                 >  1:683213/1‑138 (MQ=255)

                                                                                                                     tATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTAttt                         >  2:1531464/1‑140 (MQ=255)

                                                                                                                      aTCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTc                        >  1:3258831/1‑140 (MQ=255)

                                                                                                                          tGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATa                    >  2:6236573/1‑140 (MQ=255)

                                                                                                                               ggagcGTATGAAAGCCGTTCCCCAACCCTATAAAACGACTCTGCTTCTTCATGTTCTCAAGACATAACAACTTGTTGAGTCTTATGAGCGATCATGTCTAAATTGCCTTTACTGATTATAGCGGTTATTTCCATAAAATc               <  2:5358258/136‑1 (MQ=255)

                                                                                                                               cGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATc               >  1:1715938/1‑140 (MQ=255)

                                                                                                                               cGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTACTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATc               >  1:5121554/1‑140 (MQ=255)

                                                                                                                                 aTCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCtt             >  2:4513388/1‑140 (MQ=255)

                                                                                                                                 aTCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATAtt             >  2:5868171/1‑140 (MQ=255)

                                                                                                                                    ttATGCAAGCCCTCCCAAAAAACTATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATATCAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTccc          <  2:1640051/139‑1 (MQ=255)

                                                                                                                                       tGCACGCCCTCCCAAAAAACTAAAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCtt       <  1:6935480/140‑1 (MQ=255)

                                                                                                                                       tGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCtt       >  1:359390/1‑140 (MQ=255)

                                                                                                                                       tGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCGTATAGCGGTTATTTCCATAAAAGCTTCCCGtt       >  2:7604845/1‑140 (MQ=255)

                                                                                                                                         cAAGCCCTTCCAAAAAACTATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTAt     <  2:7395338/140‑1 (MQ=255)

                                                                                                                                         cAACCCCTCCCCAAACACGATAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTAt     <  1:6319936/140‑1 (MQ=255)

                                                                                                                                            gCCCTTCCCAAAACCGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAg  <  2:5071978/140‑1 (MQ=255)

                                                                                                                                            gCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCACGACATAACAACTTGATGAGGCTTAAGAGCTATCATGTCTAAAGTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAg  >  1:2636814/1‑140 (MQ=255)

                                                                                                                                            gCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAg  >  2:6925384/1‑140 (MQ=255)

                                                                                                                                            gCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAg  >  1:3789134/1‑140 (MQ=255)

                                                                                                                                            gCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAg  >  2:3417659/1‑140 (MQ=255)

                                                                                                                                            gCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAg  >  1:5324313/1‑140 (MQ=255)

                                                                                                                                            gCCCTTCACAAAAACTATAACACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAg  <  2:2167200/140‑1 (MQ=255)

CTCTGTAATATGGATTGGAAATGGAATTCTCTTTTCGCTAGTTTTATCACCTTGTAAGCATAACCTTCAAAGTACTCGGACAGGTCTTCTATAAATGAACCAGTCGTTATTACCTG‑TATCATGATTCGATCGTATGCAAGCCCTTCCCAAAAACGATAAAACGACTCTGCTTCTTCAAGTTCGCAAGACATAACAACTTGATGAGGCTTAAGAGCGATCATGTCTAAATTGCCGATACTGCTTATAGCGGTTATTTCCATAAAATCTTCCCCTTATCAG  >  NZ_CP034943/3851115‑3851393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`