| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 4,040,429 | C→A | 6.3% | R197L (CGT→CTT) | mnmG ← | tRNA uridine‑5‑carboxymethylaminomethyl(34) synthesis enzyme MnmG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 4,040,429 | 0 | C | A | 6.3% | 1978.0 / 28.0 | 759 | R197L (CGT→CTT) | mnmG | tRNA uridine‑5‑carboxymethylaminomethyl(34) synthesis enzyme MnmG |
| Reads supporting (aligned to +/- strand): ref base C (263/416); new base A (78/2); total (341/418) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.03e-27 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 814 total aligned reads displayed.
CCAGCAAGGCAGCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTGTCGTCATGACAACTGC > NZ_CP034943/4040290‑4040568 | ccagcAAGGCAGCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAaac > 1:1816335/1‑140 (MQ=255)ccagcAAGGCAGCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGGTTTGCTGTAATCAAGCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAaac > 2:3695665/1‑140 (MQ=255) cAAGGCAGCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAaacgaac < 2:1237642/140‑1 (MQ=255) cAAGGCAGCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAaacgaac < 1:2335131/140‑1 (MQ=255) cAAGGCAGCGGATCTGTAAGATATTCCACTGGTTCATATGAGAAAGCGCGACGCACATCGTCACCAGGCTGACTTTCCGTTTTGCTGTAATCAATCGCGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAaacgaac < 2:5865015/140‑1 (MQ=255) caGGCATCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAaacgaacg < 2:1991042/139‑1 (MQ=255) aaGGCAGCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAaacgaacg < 1:3207677/140‑1 (MQ=255) agctgagctgTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAAGTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTTACGCGAGGCGGCGTACCTGTTTTAAAACGAACGCGGtg > 1:4075263/1‑139 (MQ=255) tCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑Gcc < 2:5373779/140‑1 (MQ=255) gTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAg < 1:6292195/140‑1 (MQ=255) tatTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTTAAGCGAGGCGGCGGACCTGTTTTAAAACCAACCAGGTCAAA‑GCCCAGAtactc > 2:4339001/1‑140 (MQ=255) ttCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTTAAGCGAGGCGGCGTACCTGTTTTAAAAAGAACGAGGTCAAA‑TCCCAGTTCCTCCa > 2:6662961/1‑140 (MQ=255) tCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAAAGAGGTCAAA‑GCCAAGTTCCTCCaa > 1:5748437/1‑140 (MQ=255) tCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAAAGAACGAGGTCAAA‑GCCCAGTTGCTCCaa > 1:980140/1‑140 (MQ=255) tCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCGTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCACTTCCTCCaa > 1:867905/1‑140 (MQ=255) cACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAAt > 2:4068380/1‑140 (MQ=255) cACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAAt > 1:7315248/1‑140 (MQ=255) cACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCACCAAAt > 2:467681/1‑140 (MQ=255) cACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAAAGAACGAGGTCAAA‑GACCCGTTACTACAAAt > 2:4414144/1‑140 (MQ=255) cACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTAACAGTTTTAAAAAGAACGATGTCAAA‑GACCAGTTACTCCAAAt > 2:2439559/1‑140 (MQ=255) cACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGGACCTGGTTTAAAAAGAACGAGGTCAAA‑GCCCAGTTGCTCCAAAt > 1:364184/1‑140 (MQ=255) gTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGAAGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTGCTCCAAATGCTc > 1:4688802/1‑140 (MQ=255) tttCATATGAGAAAGCGCTAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCAGTTTTAAAACGAAACAGGTCAAA‑GCACACTTACTCCAAATGCTCa > 2:7170817/1‑140 (MQ=255) tttCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGAGGCGTGGCGGCGTACCTGTTTTAAAAAGAACGAGGTGAAA‑GACCCGTTGCTCCAAATGGTCa > 1:1001481/1‑140 (MQ=255) tttCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCa < 2:5664048/140‑1 (MQ=255) tttCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCa > 2:1751622/1‑140 (MQ=255) tttCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACATGTTTTAAAAAGAAAGAGGTAAAACGCCCAG‑TCCGCCAAAAGCTCa > 2:6525628/1‑140 (MQ=255) tttCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAAGTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGAACCGAGGCGGCGGACCTGGTTTATAAACAAAGAGGTCAAA‑TCCCAGTTACTCCAAATGATCa > 1:5003179/1‑140 (MQ=255) tatGAGAAAGCGCGAGGCACATCGTCACCAGGCTGTCTTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGATGTCAAA‑TCCCAGTTCCTCCCAATGCTGACAAAg > 2:7506204/1‑140 (MQ=255) tatGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAg < 2:3863869/140‑1 (MQ=255) tGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCt < 2:6078083/140‑1 (MQ=255) tGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGGAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCt < 2:2844869/140‑1 (MQ=255) tGAGAAAGCGCGAGGCACATAGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCt < 2:1492991/140‑1 (MQ=255) gaAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTTACGCGAGGCGGCGTACCAGTTTTAAAAAGAACGAGGTCAAA‑GCCCATTTCCTCCAAATGCTCAGAAAGCTTaa > 1:5634421/1‑140 (MQ=255) gaAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACCAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTaa > 2:4957627/1‑140 (MQ=255) cgcgAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGaa > 2:4199370/1‑140 (MQ=255) cgcgAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCGTTTGACGCGAGGCGGCGTACCTGTTTTAAAAAGAACGATGTCAAA‑GCCCAGTTGCTCCAAATTCTCCGAAAGCTTAATATaa > 1:3336588/1‑140 (MQ=255) cgcgAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCAGTTGACGCGCGGCGGCGTACCTGTTTTAAAACGAACGAGGGCAAA‑GCCCAGTTCCTCCAAATGCGCCGAAAGCTGAATAGaa > 2:7305911/1‑140 (MQ=255) ggCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGACGgctg < 2:6300717/140‑1 (MQ=255) gCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGgctgc < 2:2556718/140‑1 (MQ=255) gCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGAAGCGAGGCGGCGTACCGGTTTTAAAACGAACGAGGTCAAA‑GCCCACTTACTCCAAATTCTAAGAAAGCTTAATAGAAGgctgc > 2:3071255/1‑140 (MQ=255) gCACATCGTCACCAGGCTGAAGTTCCGTTTTGCTGTAATCAATCGAGTCGCATTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGgctgc < 1:3584851/140‑1 (MQ=255) acaTCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGctgctg < 2:84762/140‑1 (MQ=255) tCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTAtt < 2:7037094/140‑1 (MQ=255) cACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGTCGCGAGGCGGCGGACCGGTTTTAAAAAGAAAGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATATGAGGCTGCTGGTTATTc > 2:3329811/1‑140 (MQ=255) cAGGCTGAATTTCCGTTTTGCTGTAAGCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGa < 1:6672757/140‑1 (MQ=255) aGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGAc < 1:2495353/140‑1 (MQ=255) ggCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAAAGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGAcc > 2:6714263/1‑140 (MQ=255) gtGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 2:488230/139‑1 (MQ=255) cccactgtCCGATGTGCTGTAACCAAGCGAGTCGCTATTGCCGCCAGGCGGCGTACCTGAGATAAAACGAACGCGGTCAAA‑GCCCAGTTCCTCCAACTGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:4184471/133‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGCCGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCACATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCgg < 1:1336088/140‑2 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCTGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTGCAAATGCTCAGAAAGCTTAATAGAAGGCTGATGGTTATTCGGACCGc < 2:6002045/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGACGGCTGCTGGTTATTCGGACCGc < 1:1747219/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:4613380/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:741534/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:2796185/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:3467430/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:6525666/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:2683120/140‑1 (MQ=255) cTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 2:2720054/140‑1 (MQ=255) cTGAATGTCCGTTTTTCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 1:7668250/140‑1 (MQ=255) cTGAATGTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGCTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGc < 2:1131858/140‑1 (MQ=255) tGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCCCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCt < 1:3058308/140‑1 (MQ=255) gAATGTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCtt < 2:1816335/140‑1 (MQ=255) aTTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCAGTTTTAAAACCAACGAGGTCAAA‑GCCCAGTTACTCCAAATGATCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGa > 2:2201336/1‑140 (MQ=255) tttCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAg < 2:3437202/140‑1 (MQ=255) cGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAg < 1:7036440/140‑1 (MQ=255) tAATCAATCGAGTCGCTTTTGTAGCGAGGCGGCGTACCGGTTTTAAAACGAACCACGTCAAA‑ACCCACTTACTCCAAATGCTCACAAACCTTAATAAAAGGCTGCTGGTTATTAGGACCGCTTGAGTAAAACAGATAAcc > 1:3724822/1‑140 (MQ=255) tAATCAATCGAGTCGCTTTTGGCGCGGGGCGGCGTACCTGGTTTAAAACGAACGCGGTGAAA‑GCCCCGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCGGCTGGTTATTAGGCCCCCTTGATTAACAAAGATCAcc > 2:3207105/1‑140 (MQ=255) tAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCTGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCAcc < 2:7604664/140‑1 (MQ=255) aatcaatcGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCa < 2:1563186/140‑1 (MQ=255) aGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCCAATGCTCAGAAAGCTTAATATAAGGCTGCTGGTTATTAGGACCGCTTGTGTAAGAAAGATCACCAAGAATGAtt > 2:695218/1‑140 (MQ=255) gTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTc < 2:5757492/140‑1 (MQ=255) tCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCg < 1:4510283/140‑1 (MQ=255) cGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGt < 1:1986170/140‑1 (MQ=255) cGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGt < 1:793361/140‑1 (MQ=255) gCTTTTGACGCGAGGCGGCGTCCCGGATTGAAACCGAACGAGGTCCCA‑GCCCACTTCCACCAACTGCTCACAAAGCAGAATACAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAACAATGATTCGTc < 2:2319139/140‑1 (MQ=255) gCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATCGAAGGCTGCTGGTTATTCGGACCGCTGGAGTAAGACAGATCACCAAGAATGATTCGTc < 2:4594769/140‑1 (MQ=255) gCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTc < 2:5287796/140‑1 (MQ=255) gCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTc < 2:5582031/140‑1 (MQ=255) gCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTc < 1:142960/140‑1 (MQ=255) gCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTc < 1:1649153/140‑1 (MQ=255) gCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTc < 2:2972622/140‑1 (MQ=255) cTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAACGGCTCAGAAAGCTTAATAGCAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTcc < 1:5886883/140‑1 (MQ=255) cTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTcc < 1:5173303/140‑1 (MQ=255) ttGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCctct < 2:7745211/140‑1 (MQ=255) aGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATg > 1:3840088/1‑140 (MQ=255) aGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATg > 2:5492284/1‑140 (MQ=255) aGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATg > 1:7579778/1‑140 (MQ=255) aGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTGGAGTACGCCCGATCACCAAGAATGAGTCGTGCTCTGCAATATg > 2:6423072/1‑140 (MQ=255) gcgTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCt < 1:6167173/140‑1 (MQ=255) cgTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTg < 1:1189731/140‑1 (MQ=255) tACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTgtc > 2:1336714/1‑140 (MQ=255) cTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTgtcgtc < 1:5413498/140‑1 (MQ=255) cTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTgtcgtc < 1:5292905/140‑1 (MQ=255) cTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTgtcgtc < 1:4847486/140‑1 (MQ=255) ttAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATATCCCTGTCGTCATGAc > 1:6843386/1‑140 (MQ=255) aaaCGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTGTCGTCATGACAAc > 1:5544174/1‑140 (MQ=255) cgaccgaGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTGTCGTCATGACAACTGc < 2:5128853/140‑1 (MQ=255) cgaacgaGGTCAAA‑GCCCAGTTCCTCCACATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACATATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTGTCGTCATGACAACTGc < 2:6229066/140‑1 (MQ=255) | CCAGCAAGGCAGCTGATCTGTAATATATTCCACTGTTTCATATGAGAAAGCGCGAGGCACATCGTCACCAGGCTGAATTTCCGTTTTGCTGTAATCAATCGAGTCGCTTTTGACGCGAGGCGGCGTACCTGTTTTAAAACGAACGAGGTCAAA‑GCCCAGTTCCTCCAAATGCTCAGAAAGCTTAATAGAAGGCTGCTGGTTATTCGGACCGCTTGAGTAAGACAGATCACCAAGAATGATTCGTCCTCTTAAATATGTCCCTGTCGTCATGACAACTGC > NZ_CP034943/4040290‑4040568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |