| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 112,636 | G→T | 6.0% | R4I (AGA→ATA) | cysE → | serine O‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 112,636 | 0 | G | T | 6.0% | 2118.2 / 29.3 | 768 | R4I (AGA→ATA) | cysE | serine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (183/514); new base T (69/2); total (252/516) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-34 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 771 total aligned reads displayed.
GGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATT > NZ_CP034943/112497‑112774 | gagaGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGa < 1:7435922/140‑1 (MQ=255) gagaGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑CGAAATCAAATAGAGAAGGGGGGGGAAGCATGTGTTTTTTAGa < 2:6101026/140‑1 (MQ=255) agCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTGGGTGTAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTATAATg > 1:5562933/1‑140 (MQ=255) gTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaag < 1:6608930/140‑1 (MQ=255) gTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaag < 2:6598322/140‑1 (MQ=255) gTCGGCGTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGAGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaag < 2:3265119/140‑1 (MQ=255) ctctcCTTTACAAACATAGTCGAACCGCGCGTATTAAGCGTATATGTCATGTTTTCATGCAGAGGCGCTATTTTTATTCGGTGAAGA‑GGAAAACAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaag < 2:4063010/139‑1 (MQ=255) ctCTGCTTTTCAAACAGAGTCGAACCGCGCGGTTTAAGAGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaag < 2:4579365/139‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 2:4806218/140‑1 (MQ=255) tcTTTTCAAACAGAGTGGAACCGCGCTGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTTTTTAAGA‑GTAAATCAAATAGAGAATTTGGGGTAAGCATTTTTTTTTTAGAATGCTCAAagaaga < 1:692850/139‑1 (MQ=255) gCTTTTCAACCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGAGAAGA‑GTAAATCAAATAGAGAAGTGGGGGTAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:7633921/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:2712284/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTAATGCAGAGGCGCTTTTTTTAGTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:823246/140‑1 (MQ=255) agacagaaaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGCAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGAc < 1:3709268/134‑1 (MQ=255) ttttCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGACGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACa < 1:3313546/140‑1 (MQ=255) tttCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACAt < 1:1827470/140‑1 (MQ=255) cAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCGTTTTTTTTTTGGGGGAGA‑GGGAATCAAATATAGTAGTTGGGGGGAGCAGGGGTTTTTTATAATTCTCAAAGAAAACaattt > 1:4670348/1‑136 (MQ=255) aaCTGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAACTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:3819037/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:7679113/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:3502674/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:515736/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTGATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:985514/140‑1 (MQ=255) cAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACa < 1:1920477/140‑1 (MQ=255) agTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAgtg < 1:5707971/140‑1 (MQ=255) tGGAACCGCGCGGTTTACGCGTCTCTGTCATGTTTTCAGGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATCGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGtt < 2:5025433/140‑1 (MQ=255) tGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGtt < 2:3169162/140‑1 (MQ=255) cgcgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAACTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCa < 2:1983625/140‑1 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCCGAGGCGCTTTTTTTATTGGGTGGAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTATAATGCTCAAAGAAGACCTTTTTAAACTGTTCGATCaat > 2:2455862/1‑139 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGCGGCGCTTTTTTTATTTGGGGTAGA‑CGAAATGAAATATTGAATGGGGGGGACGCCTGTGTTTTTTTGAATTCTGTAAGAAACAATTGATACCGTGTTAGGTCAAg > 1:100097/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTGGGTGAAGA‑GGAAATAAAATATAGAAGTGGGGGGAAGCAAGTGTTTTTTATAATTATAAAATAAGACAATGATACAGTGTTCGagaaaa > 1:3828336/1‑135 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTGGTGAAGA‑GGAAAACAAAAAGAGAAGTGGGGGGAACCCAGTGTTTTTTATTATTCTCAAATAAAAAATTGATAAAGTGTTCGATAAAg > 1:7504877/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGTGTGAAGA‑GGAAATAAAATAGAGAAGTGGGGGGAAGCAAGTGTTTTTTAGAATGGTCAAAGAAGACATTGATACAGTGTTCGATAAAg > 2:4929269/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGT‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATTCTCAAAGAAGACATTGATACAGTGTTAGATCAAg > 2:5136207/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGTAATCAAATAGATAAGTGGGGGGAAGCATGTGTTTTTTAGAATTCTAAAAGAAGACATTGATAAAGTGTTAGATCAAg > 2:2077532/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATTCTCAAAGAAGACAATTATAAATTGTTCGATaaaa > 2:5827986/1‑139 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGGTCGATAAAg > 2:6736530/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGGGAAGA‑GGAAATCAAATAGAGAAGGGGGGGGAAGGATGTGTTTTTTAGAATGCTCAAAGAAGACAATGATACCGTGTTCGATCAAg > 2:2805436/1‑140 (MQ=255) tttAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTGGGGAAGA‑GGAAAACAAATAGAGAACTGGGGGGAAGCCTTTGTTTTTTAGAATGCTCAAATAACACAATTAAACAGGGTTCGATCAATATAca > 1:6111689/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTTGGGGTATACGCAAAACAAA‑AGAGCAGGGGGGGGGAGCATGTGTTTTTTTTGATGCGGAAAAAAGACAATGAGAAACTGTTAGGTAAAAATCCACCAGCaacca > 1:2997412/1‑137 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTTGGGGGAGA‑GGGAAAAAAAAAGAGACATGGGGGGGCGCATGTGTTTTTTTTAAATCTCAAAAAAAACAATGATAAAGTGTTGGATAAAAAAACAGCAGCaagaa > 1:2053176/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTATAATTCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:7167810/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTTATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:2523587/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAACCAGGTTTTTTTTATAATGCTCAAAGAAGACATTGATAAAGTGTTCGATCAAGATCAAGCAGCaagaa > 2:6254236/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGGGCAGA‑GGAAATCAAATAGAGAAGGGGGGGGTAGCATGTGTTTTTTAGCATGCTCAAAGAAGACAGTTATGCAGTGTTAGATAACGATCCAGCAGCaagaa > 2:4146756/1‑140 (MQ=255) tctGTAATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAATA‑GGAAATCCATTAGATAAGTGGGGGTAACCAGGTGTTTTTTAGAATTCTAAATGTAGACATTTATACAGTGTTCGAGGAAGATACCGCAGCtagta > 2:1319332/1‑138 (MQ=255) tcggTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAATTAGAGAAGTTGGGGGAAGCATGGGTTTTTTAGAATGCTCAAAGAAGACCTTGATACCCTGTTCGATCAAGATCCAGCAGCaagag > 2:4310298/4‑139 (MQ=255) ctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGCTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaag < 2:928553/140‑1 (MQ=255) ctGTCATGTGTTCATGCAGAGGCGCTTTTTTGATTGGGTGAAGA‑GGAACTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaag < 1:7075693/140‑1 (MQ=255) tGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGTATA‑GGAAAACAAATATAGAACTGGGGGGCAGCAAGTGTTTTTTTTAATTCTCAAAAAAGACAATGATAAAGTGTTAGATAAAGATACACCAGCAAAAAGt > 1:2606221/1‑140 (MQ=255) aTGTTTTCATGCCGAGGCGCTTTTTTTATTGGGGGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTAtt > 2:1836040/1‑140 (MQ=255) ttttCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGTAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTTTTACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTg > 2:3558997/1‑140 (MQ=255) ttCATGCAGAGGCGCTTTTTTTATTGGGTTAAGA‑GGAAATCAAATATAGAAGTGGGGGGAACCATGTTTTTTTTAGAATGATCAAAGAAGACAATTATACAGTGTTAGATAAATATCCAGCAGCAAGAAGTTATTTTGaa > 2:1238332/1‑140 (MQ=255) ttCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑CGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGaa < 1:2433419/140‑1 (MQ=255) tccggagagGGGCATTTTTTTTTGGGGGCAGC‑CGAAAACAAATTCCCCAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGt < 1:906701/135‑1 (MQ=255) cATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGt < 1:5912861/140‑1 (MQ=255) cTTTTTTTATTTGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTAAAAGAACAAAATTATACACTTTTCGAACAAAATACAGCATCAAAAAGTTATTTTTAATTGTTTTTAAATTa > 2:6914540/1‑140 (MQ=255) cTTTTTTTATTTGGTGAAGA‑GGAAAACAAATAGAGACGGGGGGGGAACGAGGTGTTTTTTAGAATGCTCAAATATGACATTTATACATGTTTAGATCAATATCAAACACCAAGAATGTAATTTGTAGTGATTTTAAGTTa > 2:7279051/1‑140 (MQ=255) cTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAACTGGGGGGCAGCATGTGTTTTTTAGAATTCTCAAAGAACACAATGATACAGTGTTCGATCAAGATCCACCACCAAGAAGTTATTTTGAAGTTATTTTAAATTa > 2:302194/1‑140 (MQ=255) gtttttATGGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTGTAGAATGCTCAAAGCAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTAtt < 1:4236213/139‑1 (MQ=255) ttttATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTcc < 1:1547460/140‑1 (MQ=255) tcgctGAAGA‑GCAAATCAAATACAGAAGTGGGGCGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGAATTTAACTTATTCCGGATTa < 2:7517857/136‑1 (MQ=255) tGGGTGCAGA‑GGAAATCAAATAGAGACGGGGGGGGAAGCATGTGTTTTTGAGAATGCTCAAAGACGACATTGATACAGTGTTCGATCAAGAGCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 1:3206608/140‑1 (MQ=255) tGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 2:6348808/140‑1 (MQ=255) tGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 2:4464410/140‑1 (MQ=255) agggTGAAGA‑CGAAATCAAATAGAGACGTGGGGGGAAGCATGTTTTTTTTAGAATGCTCAAAGAATACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 2:7418450/139‑1 (MQ=255) ggTGAAGA‑GGAAATCACATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2109964/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTGACTTATTCCGGTTTACa < 1:4994649/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:1279560/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:1716612/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:4540869/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:2944423/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGGGGGGGGAAGCAGGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2828974/140‑1 (MQ=255) tGAAGA‑GGAAATCACATAGAGAAGTGGGGGGACTCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg < 1:4043304/140‑1 (MQ=255) tGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg < 2:1162501/140‑1 (MQ=255) tGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg < 2:5388739/140‑1 (MQ=255) tGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg > 2:367066/1‑140 (MQ=255) aaTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATggg > 1:1109523/1‑140 (MQ=255) aTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaag > 2:4671298/1‑92 (MQ=255) aTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa > 2:5515405/1‑128 (MQ=255) tCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGgcg < 2:141722/140‑1 (MQ=255) aaaTAGAGAAGTGTGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCa < 1:3461498/140‑1 (MQ=255) aaaTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCa < 1:1382697/140‑1 (MQ=255) aaaTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCa < 1:5988714/140‑1 (MQ=255) gagaAGTGGGGGTAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 1:6840138/140‑1 (MQ=255) gagaAGTGGGGGGACGCATGTGTTTTTTAGAATGCTCAAAGAAGCCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 1:5468878/140‑1 (MQ=255) aaGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTg < 2:2184449/140‑1 (MQ=255) tGGGGGGAATCATGTGTTTATTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:7208897/140‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:6270183/140‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 2:7104835/140‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:4366785/140‑1 (MQ=255) gggggggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:6389353/139‑1 (MQ=255) ggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCt < 1:4797029/140‑1 (MQ=255) ggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCt < 1:1706310/140‑1 (MQ=255) ggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGGTATTTTGAAGTGATTTGAACTTATTCCGGTTTCCATGCTATATGGGCGCATCGGATTGCACATGCt < 1:2312186/140‑1 (MQ=255) cATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTtata > 1:3599746/1‑140 (MQ=255) cATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTtata > 2:2375530/1‑140 (MQ=255) cATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGATATATGGGCGCATCGGATTGCACATGCTTtcta > 2:5980609/1‑140 (MQ=255) tgtgTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTtatata > 1:4875312/1‑140 (MQ=255) tgtTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATGTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATaaa > 2:3430920/1‑140 (MQ=255) aGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAAtt < 2:5642382/140‑1 (MQ=255) | GGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATT > NZ_CP034943/112497‑112774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |