| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,194,168 | G→T | 15.4% | Q247K (CAA→AAA) | kdgR ← | pectin utilization transcriptional regulator KdgR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,194,168 | 0 | G | T | 15.4% | 820.9 / 46.5 | 431 | Q247K (CAA→AAA) | kdgR | pectin utilization transcriptional regulator KdgR |
| Reads supporting (aligned to +/- strand): ref base G (189/160); new base T (77/3); total (268/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 435 total aligned reads displayed.
GGACCAATCAGTTTATACCATTCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGTTGCTCTTTCTGCA > NZ_CP034943/2194029‑2194307 | aTCAGTTTATACCATTCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCgg > 2:3911539/1‑140 (MQ=255) gTTTATACCATTCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCAtc < 2:3861189/140‑1 (MQ=255) tttATACCATTCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCTC‑TTTTTTTTTCTCCGGCAtct > 2:3513741/1‑140 (MQ=255) tttATACCATTCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCAtct > 2:2574358/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTTCTCCGGCATGTCTTTGTGaaa > 1:3614109/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTGCGGCATCTCTTTGTGaaa > 1:7723174/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGtaa > 1:2286473/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGaaa > 2:5850065/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGaaa > 2:4016240/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGaaa > 2:2702798/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTGTGTGaaa > 1:6905332/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCGGCGGCATCTCtttttttaa > 1:3106394/1‑134 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGATGATGATTTTCAGCATAATTCAGCCGTTCAAAGCCAGAATCGC‑TGTTTTTTTCTCAGGCATGTCTGTGTGaca > 2:6310149/1‑138 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGATCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGACTCGC‑TTTTTTTTGGTACGGCATCTCTTTGTGaaa > 2:3328103/1‑140 (MQ=255) tCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGAGACGCAGGCCAAGCTCTTCCCTACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTACGGCATATCTTTGTGaaa > 1:2041188/1‑140 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 2:3243871/140‑1 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 1:1073652/140‑1 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 1:847842/140‑1 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 2:5097450/140‑1 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 2:5621140/140‑1 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 1:6089044/140‑1 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 1:5447122/140‑1 (MQ=255) gAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 1:3855762/140‑1 (MQ=255) aaCCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATTATTTTCAGCATAATTAAGACGTTCAAAGCCAGAATCGC‑‑TTTTTTTGCTCCGGCATCTCTTTGTGAAAATAACGAAGCGcc > 2:461933/1‑140 (MQ=255) aaCCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcgc < 2:3403974/140‑1 (MQ=255) aaCCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcgc < 1:3242226/140‑1 (MQ=255) aaCCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcgc > 2:7128673/1‑140 (MQ=255) aGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCCCCt > 2:2239102/1‑140 (MQ=255) tCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGt > 2:411945/1‑140 (MQ=255) tCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGt > 1:7577405/1‑140 (MQ=255) atatCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCTTTCAAAGCCAGAATCGC‑TTTTTTTT‑CTCCGGCATATATTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATca > 2:2934655/1‑139 (MQ=255) tGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTTCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATGCTTGtt > 1:4143523/1‑140 (MQ=255) tGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGtt > 2:738991/1‑140 (MQ=255) tGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTGTGGGTAAAGGACGAAGCGCCACCGTAAGTTGATACTGGtt > 1:4253251/1‑140 (MQ=255) gAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAATCCCGAATCGC‑TTTTTTTTTCTCCGGCATCTCTTTGTGACAAGAACGAAGAGCCACCTTAAGTTGATCCtttttt > 2:4345051/1‑140 (MQ=255) gAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTTCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGttt > 1:5317526/1‑140 (MQ=255) gAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTTTGAAAAGAAAGAAGCGCCAACTTAAGTTGATCCATtttt > 1:6008276/1‑140 (MQ=255) gAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 1:48210/117‑1 (MQ=255) gAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGttt > 2:1038441/1‑140 (MQ=255) gAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGttt > 2:3442803/1‑140 (MQ=255) gAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCGTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGttt > 2:1522407/1‑140 (MQ=255) aGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTTCTACGGCATGTCTTTTTGAAAAGAAACAATCGCCCCCTTAAGTTGATACTtttttt > 1:5555889/1‑140 (MQ=255) aGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTGCGGCATCTCTTTGTGAAAAGAACGCAGCGCCACCTTAAGTTGATCCTTGtttt > 1:6269556/1‑140 (MQ=255) gggATACTCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGttttt < 2:5243559/140‑1 (MQ=255) aCGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCAACTCTTTGTGAAAAGAACGAAGCGCCACCATAAGTTGATCCTTGTTTTTTACga > 1:1609537/1‑139 (MQ=255) agCAGGCCAAGCAGGTCCATACACCTGATTATTTTCAGCATAATTAACCCGTTCAAATCCATAATAGCTTTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGt < 1:6652374/139‑1 (MQ=255) aGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAAt < 2:3039266/140‑1 (MQ=255) gCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTGTTTTGCTGCGGCCTCGCTTTGTGAAAAGAACGAAGCGCCCCCTTAGGTTGTGGGTTGTTTTTTTGGTCAAttt > 1:4924724/1‑140 (MQ=255) cAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCa < 2:4726460/140‑1 (MQ=255) aaGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGGATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCaa > 2:5964729/1‑139 (MQ=255) gCTCGTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATAc < 1:7247109/140‑1 (MQ=255) ctcgTCCATACAGCTGATGATTTTCAGCATAATTCAGCCGTTCAAAGCCAGACTCGC‑TTTTTTTGGCTCCGGCATCTCTTTGTGACAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACa < 2:3711811/140‑1 (MQ=255) tctTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACAt < 1:3992751/140‑1 (MQ=255) tcgtCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGACTCGC‑TTTTTTTTGCTCCGGCATCTCATTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACAt < 1:6140388/137‑1 (MQ=255) tCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTTCTCCGGCAGCTCTTTGTGAAAAGAAAGAAGCGCCCCCGTAAGTTGTTGCTTGTTTTTTACGTCAAATTCATAAAtaat > 1:1027802/1‑137 (MQ=255) tCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCAGGTCTTTGTGAAAAGAACGTAGCGCCACCTTATGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCt > 1:1858136/1‑140 (MQ=255) tCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCAACTCTTTTTTAAAATAAAGAAACGCCACATTAAGTTTATGCTTTTTTTTTAAGTCAATTTAATACaatat > 1:1289521/1‑136 (MQ=255) tCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAAACGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAAAGAAGCTCCACCTAAAGTTGATACTTGTTTTTTAAGTCAATTTAATACAttat > 2:5713083/1‑138 (MQ=255) tCCATACAGCTGATGATTTTCAGCATAATTAAGCCGGTCAATGGCCGAATCGC‑TTTTGTTTGCTACGGCATCTATGTGTGAAAAGAACGACGCGCCACCTTAAGTTGATCCGTGGTTTTTAGGTCAGTTTCATGCagtgt > 2:6273935/1‑136 (MQ=255) tACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACa < 2:4836902/140‑1 (MQ=255) cTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGGTGCGGCCTCTATTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGAGGCTTGTTTTTTTCGTAAAATTACTACCATCTTActctgcc > 1:239406/1‑134 (MQ=255) cTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCCTCTCGTTGTGAAAAGAACGAAGCGCCACCGTAAGTTGATCCATGGTTTTTACGTCAAGTTCATAAAATATTACAAGccc > 1:4522473/1‑140 (MQ=255) cTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAATAAACAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTAATAAATTATTAAAAcccc > 1:304418/1‑140 (MQ=255) cTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAATCGCCACCTTAAGTTGATACTTGTTTTTTACGTCAATTTAATAAATTATTaaaatacc > 2:6114328/1‑136 (MQ=255) cTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAAt < 1:4678427/119‑1 (MQ=255) cTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAAAGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGccc > 2:6410510/1‑140 (MQ=255) gatgatTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTTCTCCGGGATCTCTTTTTTGAAAGAAAGAACCGGCACCATAAGGTGATGCGTGTTTTTTACGTCAATTTGATTAATTATTAAAACCCCGt > 1:4588749/1‑140 (MQ=255) atgatTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg < 1:7458144/82‑1 (MQ=255) tgatTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCGTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTc < 2:5471483/140‑1 (MQ=255) ttttCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTTCTCCGGCCTCTCTTTGTGAAAAGAACGAAGCGCCACCATAACTTGATCCTTGTTTTTTACGTCAAATTCATACATTCTTACAAGCCCGGTCGCa > 1:3461914/1‑140 (MQ=255) tCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAATAACGAAGCGCCACCTTAAGTTGAGCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCAttt > 2:1888582/1‑140 (MQ=255) tCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAgcg > 2:2479018/1‑75 (MQ=255) aaTTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCg > 2:6853963/1‑140 (MQ=255) aaTTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCATAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCg > 2:7261299/1‑140 (MQ=255) aaTTAAGACGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGAGCCTTGTTTTTTACGTCAATTTCATACATTCTTCCAAGCCCGTTCGCATTTTGGGCCg < 2:1705529/140‑1 (MQ=255) aGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCAcc < 1:5705723/68‑1 (MQ=255) gCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCa < 1:502928/140‑1 (MQ=255) gCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCa < 1:1752396/140‑1 (MQ=255) gCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTATTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCa < 2:1998126/140‑1 (MQ=255) cGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCAtt < 1:6541041/140‑1 (MQ=255) cGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCAtt < 2:7521396/140‑1 (MQ=255) cGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCAtt < 2:1212513/140‑1 (MQ=255) cGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCAtt < 1:7639592/140‑1 (MQ=255) ttCAAAGCCCGAAACGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGGTGTTTACGACACTGTCATAGATTCGTACAATCCCGTTCGCAGTTTGGGCCGAAGcccgttg > 2:4522674/1‑135 (MQ=255) ttCAAAGCCAGAATCGC‑TTTTTTTTTGTCCGGCCTGTCTTTGTTTAAATAAAGAAGCGCCCCCGTAAGTTTTTACTTTTTTTTTTAGTCAATTTGATACAATATTAAAAACCCGGTGGCATTTTTGGCCGGAACCAttta > 1:392003/1‑139 (MQ=255) ttCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAATAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTAAGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTc > 2:622632/1‑140 (MQ=255) tacAAAGCCAGACTCGC‑TTTTTTTTGCTCCGGCAACTCGTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGGGAATTGGATACCATCTTACAAGACCGTTGGCATTTTGGGCCGAATCCATTTc > 2:13836/3‑140 (MQ=255) tCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTcc < 1:6383525/140‑1 (MQ=255) cAAAGCCAGAATCGCTTTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTcc < 2:7668761/140‑1 (MQ=255) gCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATa < 1:287325/140‑1 (MQ=255) gCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATa < 1:674720/140‑1 (MQ=255) cAGAATCGC‑TTTTTTGTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATaca < 2:6045712/140‑1 (MQ=255) gAATCGC‑TTTTTTTTTGTCCGGCCTCGCTTTGTGAAAAGAACCAACCGCCCCCGTAAGTTGATCCTTGTTTTTTTAGTCAATTTCATAAATTCTTACAAACCCCGTCGCATTGTGTGCCGAAGCCATTTCCTGATAcaca > 1:2640403/1‑140 (MQ=255) gAATCGC‑TTTTTTTTTCTCCGGCATCTCTTTGTGAAAAAAACCAAGCGCCACCTTAAGTTTATCCTTGTTTTTTTCGTCAAATTAATACATTCATACAAGCCCCGTCGCAATTTTGGGCGAAGCCAATTACTGATacaaa > 1:4413472/1‑138 (MQ=255) aTCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGt < 1:706196/140‑1 (MQ=255) tcgctttttttGCTCCGTCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGTTg < 2:6531756/136‑1 (MQ=255) c‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGTTGct < 2:2122175/140‑1 (MQ=255) c‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGTTGct < 1:2150939/140‑1 (MQ=255) ttttGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGTTGCTCTTTc < 1:6341473/140‑1 (MQ=255) gCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGTTGCTCTTTCTGCa < 1:5870241/140‑1 (MQ=255) | GGACCAATCAGTTTATACCATTCCGTATCATCGAACCCAGCAATCCCTATATCTTGAGGGATACGCAGGCCAAGCTCTTCCATACAGCTGATGATTTTCAGCATAATTAAGCCGTTCAAAGCCAGAATCGC‑TTTTTTTTGCTCCGGCATCTCTTTGTGAAAAGAACGAAGCGCCACCTTAAGTTGATCCTTGTTTTTTACGTCAATTTCATACATTCTTACAAGCCCGTTCGCATTTTGGGCCGAAGCCATTTCCTGATACACAGTTGCTCTTTCTGCA > NZ_CP034943/2194029‑2194307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |