| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,387,066 | T→G | 13.5% | S354R (AGC→CGC) | EO946_RS12195 ← | acetyl‑CoA C‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,387,066 | 0 | T | G | 13.5% | 806.5 / 9.8 | 392 | S354R (AGC→CGC) | EO946_RS12195 | acetyl‑CoA C‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (142/162); new base G (73/2); total (228/164) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.75e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 392 total aligned reads displayed.
CCTTTTTCGTCTGTTTTAATGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGAC > NZ_CP034943/2386929‑2387204 | cTGTTTTAATGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAAAAATTGTCATGAGTATTATCGCACCGCTTGCGCCGATCgg > 2:6318975/1‑140 (MQ=255) cTGTTTTAATGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTAGTAAAAAATAGTCATGAGGATTCTCGCACCGCGTGCGCCGCTCgg > 1:3410088/1‑140 (MQ=255) tGTTTTAATGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCCGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAACTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCggg < 2:5595053/140‑1 (MQ=255) tGTTTTAATGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCggg < 2:2836503/140‑1 (MQ=255) tGTTTGAATGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCggg < 2:4245046/140‑1 (MQ=255) aTGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGa > 2:2753002/1‑140 (MQ=255) aCTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGc < 1:3844158/140‑1 (MQ=255) cTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAATTTCATGAGTATTATCGCCCCCCGTGCGCCGATCGGGTGGCCGAGGGCg > 1:5049235/1‑140 (MQ=255) cTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTAGTAAACAAGTGTGAAGTGTAATCTCTCACCGCGTTCGCCGCTAGGGTGGCCGTggggg > 1:557602/1‑138 (MQ=255) ttGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGa < 1:1554271/140‑1 (MQ=255) tGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGAt < 2:6254559/140‑1 (MQ=255) aaGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGca‑cc < 2:352977/140‑1 (MQ=255) aGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACACATGTCATGAGTAATATCGCACCGCTTTCCGCGAACCGGTGGCCGAGGGCGCTCGca‑cca > 1:4762922/1‑140 (MQ=255) aGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAAGTCGTAAACAACGGTCAAGAGTCATCTAGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGCTCGca‑cca > 2:1142941/1‑140 (MQ=255) cGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGTGTCAGGAGTATTCTCGCCCCGCTTGCGCCCATCGGGTGGCCGCGGGCGAGCGCA‑CCA‑CCGgtt > 2:76631/1‑140 (MQ=255) ccTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTGGTAAAAAACTGTGATGAGTATTCTCGCACCGCGTGGGCCGGTCGGGTGGGCGAGGGCGATCGCA‑CCC‑CCGGTTGCAttt > 1:2372561/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATTAGTATTCTCGCACCGCTTGCCCCGATCCGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTGTAAATTTAAtttttaa > 2:6842443/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCa > 2:126886/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCa > 2:4389162/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGGGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCa > 2:5786703/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCGTGCGCCGATCGCGTGGCCGAGGGCGCTCGCA‑CCA‑CCGGTTACATTTACTTTTTCa > 2:7151130/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAACTGTAATGAGGATTGTCGCACCCCGTGCGCCGCTCGGGTGGGCGAGGGCGATCGCACCCC‑CCGTTGAC‑GTTACtttttaa > 1:6048274/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGGAAACAAGTGTAATGAGTATTATCGCACCGCGTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCa > 2:2619384/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTAGTAAAAAAGTGTGATGAGTATTATACCACCCCGTGCGGCGATCGGGTGGGCGAGGGCGCTCGCA‑CCC‑CCGGTTGCCTTTACTTTTTCa > 2:4124885/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTAGGAAACAACTGTCCATAGTATTCGGCCAACGCGTGCGCCGAACGGGTGGCCGAGGGCGAGAGCA‑CCA‑ACGGTTACAATTACattttaa > 2:2280838/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTCGTAAAAAAGTGGCATTAGGATTCTCGGACCGCGTGCGCCGCTCGGGTGGCCGCGGGCGCTCGCA‑CCC‑CCGGTTAGATTTACTTTTTCa > 1:7146459/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTATTTAGTAAAGAAGTTTGATGAGTATTGTCGCACCGCGTGCGCCGATCGGGGGGGCGAGGGCGATCGCC‑CCC‑CCGGGTACAATTAAtttttga > 1:2726630/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTGGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGCGGGCGATCGCA‑CCC‑CCGTGTACATTTACtttttaa > 2:5900964/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTAGTAAACAAGTGTGATGAGTATTGTCGCACCGGGTGGGCCGATCGGGTGGGCGCGGGCGATCGCA‑CCA‑CCGGTTACATTTTATTTTTCa > 1:5411285/1‑140 (MQ=255) aCCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAACTGTCAAGAGTATTCTCGCACCGCTTGCGCCGATCCGGTGGCCGCGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCaa > 2:1221539/1‑140 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACACGTGTCATGAGTATTCTCGCACCGCTTGCGCCGAGGGGGTGGCCGAGGGCGCTCGCA‑CCC‑CCGGTGAGCTTTTCTTTTTCAAgtgc > 2:5999803/1‑137 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTAGTAAAAAACTGTCATGAGTAATATGGCACCCCATGGGCCGATCGGGTGGCCGAGGGCGAGGGCC‑CCC‑CCGTTTACATTTACTTTTTGAAGATc > 1:2166395/1‑140 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTCGTAAACAACTGTCCTGAGTATTCTCGCACCGCGTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCCGTTACATTTTATTTTTAAAGATc > 1:6150845/1‑140 (MQ=255) aaTGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGGGTCATGAGTATTCTCGCACCCCGTGCGCCGGGCGGGTGGCCGTGGGCGATCGCA‑CCC‑CCCGTTCCCATTAAATTTTCAATATCGAAAc > 1:7417575/1‑140 (MQ=255) ggcggcAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAACTGTCATGAGTATTATCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGGTTACATTTAATTTTTCAAGATAGAAAAcga > 2:1395507/1‑140 (MQ=255) ggcAACACCCAGTCCCCCTCCCCGTCGCGTTTATTCGTAAACAAGTGGGTTTTGTTTTGTAGCACCGCGTGCGGCGCTCGGGGGGCCGGGGGCGCTCGCA‑CCACCCGTTTAC‑TTTAATTTTTCAAGTTCGTAACcgacga > 1:7054489/1‑140 (MQ=255) ggcAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGTGGCATGAGGATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATAGCA‑CCA‑CCCGTTACATTTACTTTTGCAAGTTCGAAACcgaaga > 2:1934935/1‑140 (MQ=255) ccAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTa < 1:5755273/140‑1 (MQ=255) ccACTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTa < 1:6817754/140‑1 (MQ=255) tCCCCCTCCCCGTCGCTTTAATTCGTAACCCAGTGTCATGAGTATTCTCCCAACCCTTGCCCCGATCGGGTGGCCGCGGGCGCTCGCA‑CCA‑CCGTTTACATTTAATTTTTCAAGATAGAAACCGCCGATTTTTTTACATg > 2:811760/1‑140 (MQ=255) tCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCGGGCGCCGATAGGGTGGCCGAGGGCGATCGCC‑CCA‑CCGGGTGCAATTACTATTTCAAGATCGAAACCGACGATTTTTTTaaaag > 2:5000078/1‑136 (MQ=255) ccTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCaa < 1:4309/140‑1 (MQ=255) ccTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCaa < 1:5093621/140‑1 (MQ=255) ccTCCCCGTCGCTTTAATTCGTAAAAAATTGTCATTAGTATTCTCGCACCGCTTGCGCCCATCGGGTGGCCGAGGGCGATCGCA‑CCC‑CCGTTTACATTTTCTTTTTAAAGATCGAAACCGACGATTTTTTTAAATGTCaa > 2:4569362/1‑140 (MQ=255) cggTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAaacaa < 2:6171827/138‑1 (MQ=255) ccGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAaacaa < 2:3465347/140‑1 (MQ=255) cGTCGCTTTAATTAGTAAACAAGTTTCAAGAGTATTCTCGCACCGCGTGCGCCCATCGGGTGGCCGCGGGCGATCGCA‑CCC‑CCGGTTACATTTAATTTTTCAAGATCGAAACCGACGATTTTTTTAAATGTCAAaacaaa > 2:3232271/1‑139 (MQ=255) cTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCCTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATTGCAAAACAACAGAAg > 2:5254082/1‑140 (MQ=255) ttAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCa < 2:7338839/140‑1 (MQ=255) tAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTAATTTTTCAAGATCGAAACCGACGATTTTTTTAAATGTCAAAACAACAGAAGCaa > 2:2477090/1‑140 (MQ=255) tAATTCCTAAACAACTGTCATGTGTATTCTGGCACCGCATGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGGTTACATTTACTTTTTCAAGATCGAAACCTACGATTTTTTTGCATGTCAAAACAACAGAAGccc > 2:6702535/1‑138 (MQ=255) tAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTc > 2:5479676/1‑140 (MQ=255) tAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTc > 2:6520044/1‑140 (MQ=255) tAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTc > 2:4779994/1‑140 (MQ=255) tAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTAAAGATCGAAACCGACGATTTTTTTACATGTCAAAAAAACAGAAGCAAACGATTc > 1:7570189/1‑140 (MQ=255) aaCAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCAt < 2:3853430/140‑1 (MQ=255) aaCAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGGGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTGTACATGTCAAAACAACAGAAGCAAACGCTTCAt < 1:4544628/140‑1 (MQ=255) aCAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCAtt < 1:1125014/140‑1 (MQ=255) cgtCATGAGAATTCTCGCACCGCTCGCGCCGATCGGGTGGCCGAGCGCGATCGca > 2:3273785/2‑55 (MQ=255) cgtCATGAGAATTCTCGCACCGCTCGCGCCGATCGGGTGGCCGAGCGCGATCGca < 1:3273785/54‑1 (MQ=255) tCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCa > 2:5725321/1‑140 (MQ=255) tCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACAATTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGTAGCAAAAGCTTCATTTACTTCa > 2:7694212/1‑140 (MQ=255) aTGAGTATTCTCGCACCGCTTGGGCAGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCTTTTACATTTAGTTTTTCATGATCGAAACCGACGATTTTTTTTCATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTaaaa < 1:943897/140‑1 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 1:1055970/140‑1 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 2:181520/140‑1 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 1:5971927/140‑1 (MQ=255) aGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACaa > 1:4071357/1‑140 (MQ=255) aGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACaa > 2:6363913/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 2:7083413/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:6391857/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 2:3747283/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:1810457/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:1659615/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:3627742/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTGTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 2:1693596/1‑140 (MQ=255) ttCTCTCACCGCTTGCGCCGATCGGGTGGCCGAGGGAGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAATATCTAAACCGACGATTTTTTTACATGTCAAATCAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:6976897/140‑1 (MQ=255) ttCTCGGACCGCTTGCGCCGATCGTGTGGCCGAGGGCTATCGCA‑ACA‑CCGTTTAAATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAAGAGAAGCAAACGCTTCATTTAGTTCAAACAAGTCa < 1:2280838/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCTTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 2:4762922/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa > 1:7658636/1‑140 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:2777290/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:3126715/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 2:7417575/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 2:3653574/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:4387332/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:6497768/140‑1 (MQ=255) tctcGCACCGCTTTCGCCGATCGGGTTGCCGATTGCGATCGCA‑CCA‑CATTTTACATTTACTTTTTAAAGATAGAAACCGAATATTTTTTTACATGTCAAAACAACATAATAAAAAGATTCATTTACTTCAAACCAGTaaa < 2:3086761/140‑1 (MQ=255) tctcGCACCGCTTGCGCCGATAGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATATTTTTACATGTCAAAACAACATAAGCAAACGCTTCATTTACTTCAAACAAGTCaa > 1:3252357/1‑140 (MQ=255) tctcGCACCGCTTGCGCAGATCGGGTGTCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTAAATATATAAACAGACTATTTTTTTACATGTCAAAACAAGATTATTAAAATATTCATTTACTTCaaaaaattaaa < 2:2217837/140‑6 (MQ=255) tcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAata > 2:6107629/1‑140 (MQ=255) tcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAata > 1:2030305/1‑140 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg > 2:7510496/1‑140 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg < 2:6222306/140‑1 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg < 2:6443661/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:126886/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 2:2067455/140‑1 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAacaaca < 2:1885416/96‑1 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:5537454/139‑1 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGAc > 1:2592977/1‑140 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGAc > 2:1551445/1‑140 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTGTACATGTCAAATCAACAGAAGCTAACGCTTCATTTACTTCAAACAAGTCAAGATCTTGGAc > 1:5880018/1‑140 (MQ=255) | CCTTTTTCGTCTGTTTTAATGAACTTGCACTAAGACGGCGTCACCCTGAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCA‑CCA‑CCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGAC > NZ_CP034943/2386929‑2387204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |