| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 3757046 | 230 (0.990) | 5 (0.020) | 3/248 | NT | 1.8% | coding (678/678 nt) | EO946_RS19340 | CidB/LrgB family autolysis modulator |
| ? | NZ_CP034943 | 3760752 = | 314 (1.370) | intergenic (+4/‑103) | EO946_RS19370/EO946_RS19375 | LrgB family protein/MFS transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTCGGCACAAGCGCACACGGAGCGGGAACGTCAAAGGCATTTGAACTCAGCTCTGTGTCCGGTACGATTTCCAGCGTGTCAATGATCTTAGCTGCGATTATGACGCTTTGCGCAGCGCCGTTTTTACTTTCATTTATGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/3756906‑3757046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaAAAACTGTCCTCTCAAGGGCAGTTTTTTTTATGTGCTTCCCCTTATTGAAAAG > NZ_CP034943/3760752‑3760804 CTCGGCACAAGCGCACACGGAGCGGGAACGTCAAAGGCATTTGAACTCAGCTCTGTGTCCGGTACGATTTCCAGCGTGTCAATGATCTTAGCTGCGATTATGACGCTTTGCGCAGCGCCGTTTTTACTTTCATTTATGTA < 1:1808317/140‑1CTCGGCACAAGCGCACACGGAGCGGGAACGTCAAAGGCATTTGAACTCAGCTCTGTGTCCGGTACGATTTCCAGCGTGTCAATGATCTTAGCTGCGATTATGACGCTTTGCGCAGCGCCGTTTTTACTTTCAGTTATGTA > 2:3686568/1‑140 TCGGCACAAGCGCACACGGAGCGGGAACGTCAAAGGCATTTGAACTCAGCTCTGTGTCCGGTACGATTTCCAGCGTGTCAATGATCTTAGCTGCGATTATGACGCTTTGCGCAGCGCCGTTTTTACTTTCATTTATGTAA > 2:3053324/1‑140 TCGGCACAAGCGCACACGGAGCGGGAACGTCAAAGGCATTTGAACTCAGCTCTGTGTCCGGTACGATTTCCAGCGTGTCAATGATCTTAGCTGCGATTATGACGCTTTGCGCAGCGCCGTTTTTACTTTCATTTATGTAA > 2:894963/1‑140 CACAAGCGCACACGGAGCGGGAACGTCAAAGGCATTTGAACTCAGCTCTGTGTCCGCTACGATTTCCACAGTGTCAATGATCTTAGCTGCGATTATGACGCTTTGCGCAGCGCCGTTTTTACTTTCAGTTAGGTAACAAA > 1:1373593/1‑140 CACGGAGCGGGAACGTCAAAGGCATTTGAGCTCAGCTCTGTGTCCGGCACGATTTCCAGCGTGTCGATGATCTTAGCTGCGATTATGACGCTTTGCGCGGCGCCGTTTTTGCTTTCATTTATGTAAAAAACTGTCCTCTC > 1:3145041/1‑140 AGCTCTGTGTCCGGCACGATTTCCAGCGTGTCGATGATCTTAGCTGCGATTATGACGCTTTGCGCGGCGCCGTTTTTGCTTTCATTTATGTAAAAAACTGTCCTCTCGAGGGCAGTTTTTTTTATGTGCTTCCCCTTATT > 2:758482/1‑140 AGCTCTGTGTCCGGCACGATTTCCAGCGTGTCGATGATCTTAGCTGCGATTATGACGCTTTGCGCGGCGCCGTTTTTGCTTTCATTTATGTAAAAAACTGTCCTCTCGAGGGCAGTTTTTTTTATGTGCTTCCCCTTATT > 2:760408/1‑140 GTGTCCGGCACGATTTCCAGCGTGTCGATGATCTTAGCTGCGATTATGACGCTTTGCGCGGCGCCGTTTTTGCTTTCATTTATGTAAAAAACTGTCCTCTCGAGGGCAGTTTTTTTTATGTGCTTCCCCTTATTGAAAAG < 1:758482/140‑1 GTGTCCGGCACGATTTCCAGCGTGTCGATGATCTTAGCTGCGATTATGACGCTTTGCGCGGCGCCGTTTTTGCTTTCATTTATGTAAAAAACTGTCCTCTCGAGGGCAGTTTTTTTTATGTGCTTCCCCTTATTGAAAAG < 1:760408/140‑1 CTCGGCACAAGCGCACACGGAGCGGGAACGTCAAAGGCATTTGAACTCAGCTCTGTGTCCGGTACGATTTCCAGCGTGTCAATGATCTTAGCTGCGATTATGACGCTTTGCGCAGCGCCGTTTTTACTTTCATTTATGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/3756906‑3757046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaAAAACTGTCCTCTCAAGGGCAGTTTTTTTTATGTGCTTCCCCTTATTGAAAAG > NZ_CP034943/3760752‑3760804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |