| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 634,052 | T→G | 17.4% | E573D (GAA→GAC) | EO946_RS03330 ← | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 634,052 | 0 | T | G | 17.4% | 334.1 / 25.5 | 178 | E573D (GAA→GAC) | EO946_RS03330 | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (57/83); new base G (35/2); total (92/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 186 total aligned reads displayed.
GTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAAT > NZ_CP034943/633914‑634191 | ttCTGCATGGATGGCTTGTACCTTTTCATGGTGTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGtt < 2:2132672/139‑1 (MQ=255) cttggatggCTTGTACCTTTTCTTGGTCTTGATAGATTTCCGGATCACATACCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAAGAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttc < 2:2163127/138‑1 (MQ=255) cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGttggttg > 1:3867412/1‑135 (MQ=255) cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGgtatttt > 1:1018373/1‑139 (MQ=255) atggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTGttttt > 1:2928706/1‑140 (MQ=255) atggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCttttt > 2:1305431/1‑140 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTCTTTAttttta > 2:1618865/1‑139 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCtttttg > 2:2460721/1‑139 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTGtttttg > 1:1445498/1‑139 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCttttta > 1:1839823/1‑139 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc < 1:986245/140‑1 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCttttta > 2:771555/1‑139 (MQ=255) tggCTTGTACATTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTCATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATGCGACTGAGTCGTTGGCGTTGTTTCtttttg > 2:1058156/1‑139 (MQ=255) gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCa < 2:2834645/140‑1 (MQ=255) gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCa < 2:1001803/140‑1 (MQ=255) gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTGTTTCCa > 2:2141663/1‑140 (MQ=255) cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt < 2:3538909/140‑1 (MQ=255) cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt < 2:1338529/140‑1 (MQ=255) cTTGTACCTTTTCATGGTCTTGATAGATGTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt < 2:3299459/140‑1 (MQ=255) ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTCTTTGtgtttgcctt > 1:227089/1‑135 (MQ=255) ttttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATTGTTATGACTAATGTTTTCTTCTATGTTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc < 2:2520331/140‑1 (MQ=255) tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTCAATTAtttttat > 2:13862/1‑138 (MQ=255) tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAAATTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTATTTTTACATTAtttttat > 2:3159723/1‑138 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGGTTCTTTTTTCCTTAtttttttt > 2:3479856/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTACATTCTTTttatt > 2:652950/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTCCAATATTTttatt > 1:1864696/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCATTATTTttatt > 2:1666198/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttctt < 1:770378/140‑1 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttctt < 1:524762/140‑1 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAAGGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTGGATTGTTTttgtt > 1:3601361/1‑140 (MQ=255) tCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttc < 2:1485610/140‑1 (MQ=255) cATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGTCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttct < 2:1005879/140‑1 (MQ=255) cATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttct < 2:3646499/140‑1 (MQ=255) cATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttct < 2:2289826/140‑1 (MQ=255) tGGTCTTGATAGATGTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGAATTATTTttattgtta > 1:979561/1‑139 (MQ=255) tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTCTTTCTTTTTGCATTATTTTTCTTATTAata > 2:1811869/1‑140 (MQ=255) tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGTGCGTTGTTTATTTTTCCCTTATTTTTCTTGTTCata > 2:804580/1‑140 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 2:1071285/140‑1 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGCTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCGTTTTACAATATATTTCTTATTCAAATg > 2:859738/1‑140 (MQ=255) gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTGTTTCTTTTTGCAGTGTTTTTCTTCTTCATATT‑aa > 2:443414/1‑140 (MQ=255) gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTATTTTTCCATTATTTTTATTATTAatattta > 2:2688193/1‑137 (MQ=255) gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑aa < 1:1955298/140‑1 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGttt < 2:3157999/140‑1 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGttt < 2:2508852/140‑1 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTGTTCTTAATATG‑AACGtttt > 2:3432218/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTCGTTTTTTTTGCATTATTTTTCTTCTTAATATG‑AAAGtttt > 1:2197046/1‑140 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGa > 2:3670403/1‑140 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAATCTTTTTATTCTTAATATG‑AAAGGTTTGa > 2:2697462/1‑140 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTGCATTATTTTTCTTCTTCATATG‑AAAGTTTTGa > 2:2901013/1‑140 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTCTTTTTCCCTTCTTTTTAGTATTCATATG‑AACGTTTTGa > 2:1138070/1‑140 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTACTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGt < 2:2761572/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGt < 1:459808/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGt < 1:1305431/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTATTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGt < 1:3380402/140‑1 (MQ=255) cGGATCACATAGCAAGTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCACTCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGt < 2:2914904/140‑1 (MQ=255) cGGAACACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGATCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGt < 1:1835733/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAAc < 2:3143633/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAAc < 2:2347596/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAAc < 2:1825115/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAAc < 2:1543577/140‑1 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTGGTTTTGCATTCTTTTTCTTGTTCATATT‑AAAGTTTTTTGTCATGGTTaaaccaac > 1:3755122/1‑134 (MQ=255) tCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTCTTTTTGCCTTGTTTTTCTTGTTCATAAG‑AACGTTTTTAGTCAGGCTTAAACGAAGc > 2:935641/1‑140 (MQ=255) tCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGGTTTTTGTTTTCATTAGTGTTGTTGTTAATATG‑AACGTTTTTAATGAGGCTTAACAGAAGc > 1:2642008/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTACCGTATTTTTATTATTAAAATT‑AAAGTTTTTAGTGAGGGTTAAACCAAGCa > 1:2623296/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTCTTTTTGGTCTTCATATT‑AACGTTTTTTTTCATGCTTAAACAAAGCa > 1:2593562/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAAGGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGTTTGTTTTTGCCTTCTTTTTGTTCTTGATTTGTAGCGTTTT‑ATTGAGGCTTGAACGAAGCa > 1:168974/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTGGGTTCTTTTTGCATTCTTTTTGTTCTTCATATG‑TACGTTTTTAGTAAGGCTTAAACGAATCAGGc > 2:2105406/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCTTTATTTTTACATTATTTTTCTTATTCATATG‑AACGTTTTGAGTCAGGCTTAACCGCAGCACGc > 2:1167825/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGc > 2:900058/1‑140 (MQ=255) gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt < 2:1176826/140‑1 (MQ=255) gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt < 2:2724643/140‑1 (MQ=255) gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt < 2:3759415/140‑1 (MQ=255) aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTAGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCgg < 2:2227087/140‑1 (MQ=255) ctGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTATTCCATTCATTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 1:3032082/139‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTATTTTTATTATTCATATT‑AACGTTTTGTGTCAGGCTTAAACGAAACAGGCGTTTTTTGGGAt > 2:595427/1‑140 (MQ=255) ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTTGAATATTTTTATTGTTAATATT‑AAAGTTTTTTGTAAGGGGTAAAACAAGCAGGCGTTTTTTgggtgtgct > 1:1658682/1‑134 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTGTTTTTGCCTTGTTTTTATTTTTGATATT‑TACGTTTTTTTTGAGGGTTAACCGAATCAGGCGTTTTTTGGGtttgggg > 1:3564724/1‑136 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTACATTCATTTTCTTCATCATAAG‑AACGTTTTTATTCAGGCTTAACCGAAGCATGCGTTTTTTAGGAttacaa > 2:3780933/1‑136 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGGTTGTTTTTGCAATGTTTTTGTTGTTGATATG‑AAAGGTTTTAGTGATGCTTTAACCAAGCACGCGTTTTTTTGGAttgcga > 1:1033725/1‑136 (MQ=255) ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTGTTTTTCTTCTTCAAATG‑AAAGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGGTTACACtt > 2:1906810/1‑140 (MQ=255) tcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTg < 1:2697462/140‑1 (MQ=255) tcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTg < 2:2313099/140‑1 (MQ=255) aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 2:2623296/140‑1 (MQ=255) aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 2:979561/140‑1 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTCCATTCTTTTTGTTCTTAATATG‑AAAGTTTTTTGTCAGGCTTAAACCAAGCAGGCGTTTTTTGGGATTCCTCTTGGTGTTTAAttttatac > 2:2482344/1‑136 (MQ=255) cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt < 1:900058/140‑1 (MQ=255) aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg < 2:662471/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:2452355/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 1:595427/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 1:209456/140‑1 (MQ=255) cGGAGTCGTTTGCGTTGTTTGTTTTTGCATTGTTTTTCTTGTTCATATG‑AACGTTTTGAGTCAGGGTTAAACGAAGCAGGCGTTTTTTAGGATTCCACTTGCTGATTCATTTTCTCCAAATCAAACTGGTGGtttttttt > 2:3842876/1‑140 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:1242207/140‑1 (MQ=255) cGGAGTCGTTGGCGGTCTTTGTTTTTACATTATTTTTATTCTTAATATT‑AACGTTTTGATTCAGGCTTAACCGAAGCAGGCGTTTTTTGGGTTTCCGATTTCTGATTGATTTTCTCCAATTCAAGCTGGTCTGttttttt > 2:1934932/1‑140 (MQ=255) cGGAGTCGTTGGCGGTCTTTCTTTTTCCAGTCTTTTTCTTCTTAATATG‑TACCTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTACTCGTGCGGATTCATTTTGTCCAATTCAAACTGGTATGttttttt > 2:3020060/1‑140 (MQ=255) gAGTCGGTGGCGGTCTTACAGATTCCACTCTTTGTCGTCGTCATAGG‑ACCGTTGTGAGTCAGGCTTACCCGCAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATGCATTTTCTCCAATTCAAGCTGCTCTGTTTTGTtct < 1:2474123/140‑1 (MQ=255) gAGTCGGTGGCGGTCGTTCTTTCGCCAGTCTTTGTCTTCCTCATATC‑CCCGTTGTGAGTCAGGCTTAACCGCAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCGGTTTTTTtct < 1:3205276/140‑1 (MQ=255) tCGTTGGGGGTGTTTGTTTTTGCATTCTTTTTGTTGTTGATATG‑AACGTTTTGAGTCACGGTTAAACGAAGCCGGCGTTTTTTGGGTTTACTCGTTGGGATTCATTTTCTGCAAATAAAGCTGCGGGGtttttttatgcg > 2:1516847/1‑135 (MQ=255) ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa < 1:2688193/140‑1 (MQ=255) ttctttctTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATaataat < 1:3176539/140‑1 (MQ=255) ttctttctTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATaataat < 1:2760709/140‑1 (MQ=255) | GTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATG‑AACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAAT > NZ_CP034943/633914‑634191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |