| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,263,998 | C→A | 11.0% | L62F (TTG→TTT) | fetB ← | iron export ABC transporter permease subunit FetB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,263,998 | 0 | C | A | 11.0% | 406.6 / 5.2 | 181 | L62F (TTG→TTT) | fetB | iron export ABC transporter permease subunit FetB |
| Reads supporting (aligned to +/- strand): ref base C (92/61); new base A (3/25); total (95/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.30e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 192 total aligned reads displayed.
GAAGAGACAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATAAAAAC > NZ_CP034943/1263859‑1264133 | gcagagACAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCGCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCCTCAGc < 2:2520254/138‑1 (MQ=255)gAAGAGACAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGc < 1:2513506/140‑1 (MQ=255)gAAGAGACAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGc < 1:3706193/140‑1 (MQ=255)gAAGAGACAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGc < 1:3870761/140‑1 (MQ=255)gAAGAGACAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGc < 2:1664613/140‑1 (MQ=255)gAAGAGACAGCAGAATTCCCTGCCTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGc < 1:2709283/140‑1 (MQ=255) gaCCGCAGACGTCCCGGCGACACCAGGTCGACACTCGCTAACCCGGCGACCACCCCCCAAACCGACCCGATTGTATTCGACTTTAGTTTGAAAACATCTTGCGCTGCTACTGCCAACATGAA‑CAGCACCATCAGCAAGAt < 2:542514/140‑1 (MQ=255) aaagcagAATTCCCTGCTTAAAAATTTATACAATCGATAAATAGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATa > 1:2955722/3‑140 (MQ=255) aCAGCAGAATTCCCTGCGTCACAATTTCTACGATTGCTAACGCGGCAAACACCCTCCAAAACGAACCGAGAGTATTTTTCTTACGCTTGATGACATTTTGCGCCGCCACCGCGAGCATTAA‑CAGCACCATCAGCAGGATa > 1:611823/1‑140 (MQ=255) aCAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATa > 1:359942/1‑140 (MQ=255) aCAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATa > 2:581312/1‑140 (MQ=255) aCAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATa > 2:651699/1‑140 (MQ=255) aCAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACACTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGAAAGATa > 2:3804480/1‑140 (MQ=255) cgcagAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTGTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATaaa > 1:910804/2‑140 (MQ=255) agcagAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTTTATTTTTATTTCGTTTGATAACATTTTGCGATGATACTGCCAACATTAA‑AAGCACCATCAGAAAGAaaaa > 2:2465450/1‑140 (MQ=255) agcagAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAAAGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑AAGCACCATCAGCAAGATaaa > 2:108896/1‑140 (MQ=255) gcagAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATaaaa < 2:2614403/140‑1 (MQ=255) cagAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATaaaaa > 2:1706591/1‑140 (MQ=255) cccTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATg > 1:2091286/1‑140 (MQ=255) tGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGtc > 1:3523584/1‑140 (MQ=255) tGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGtc > 1:3233435/1‑140 (MQ=255) tGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGtc > 1:1506102/1‑140 (MQ=255) gTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTcc > 1:3680196/1‑140 (MQ=255) acaATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCcgcg < 2:2893638/140‑1 (MQ=255) acaATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCcgcg < 2:1730430/140‑1 (MQ=255) acaATTTATAAAATCGCTAACGCGGCTAACACCCTCAAAAACGAACCGTTTGTTTTTTTATTTATTTTGATAACATTTTGCGCTGCTACTGACAACATTAA‑CAGCACCATAAGAAAGATAAAAACAGGATGGTCTCcgcg < 2:3286566/140‑1 (MQ=255) aaaaTTTCTACAATCGCTAACGCGGCTAACACCCTCAAAAACGAACCGATTTTATTTTTCTTTCTTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCcgcg < 2:3462566/138‑1 (MQ=255) aaTTTCTCAAATCGCTACCGCGGCGAACACCCTCCAAAACCAACCCATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGATAATGCCAACATTAA‑CAGAACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGaa < 2:3424598/140‑1 (MQ=255) aaTTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGaa < 2:2553240/140‑1 (MQ=255) aaTTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGaa < 2:1800716/140‑1 (MQ=255) ctCGCTAACGCGGCTAACACCCTACAAAACCACCCGATTTTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CACCACCATCAGAAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGa < 2:1328251/139‑1 (MQ=255) aTCGCTAACGGGGCTAACACCCTCAAAACCGAACCGTTTGTATTTTTCTTTCTTTTTATAACATTTTGCGCTGCTACTGCCAAATTTAA‑CACCAACATAAGAAAGATAAAAACAGGTTGTTCTCCGCGAAAAATAAGCGa < 2:296472/140‑1 (MQ=255) aTCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTTTTTTTATTTCGTTTGATAACATTTGGCGCTGCTACTGCCAACTTTAA‑CAGCACCATCAGCAAGATAAAAACTGGATGGTATCCGCGAAAAATAAGCGa < 2:845176/140‑1 (MQ=255) aTCGCTAACGCGGCGAACACCCTCAAAAACCAACCGATTTTATTTTTCTTTCTTTTGATAAAATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGTTGGTCTCCGCTAAAAATAAGCGa < 2:2322769/140‑1 (MQ=255) cGCTACCGCGGCGAACACCCTCCAAAACGAACCGATTTTATTTTTATTTCGTTTTATAACATTTTGCGCTGATACTGCCAACATTAA‑CAGCACCATCACCAAGATAAAAACAGGATGGTCTCCGCTAAAAATAAGCGACa < 2:3539673/140‑1 (MQ=255) cGCTAACGCGGCTAACACCCTCAAAAACGAACCGATTTTATTTTTCTTTGGTTTTATAACATTTTGCGTTGATACTGCAAACATTAA‑CAGCACCATCAGAAAGATAAAAACAGGATGGTCTCGGCGAAAAATAAGCGACa < 2:487881/140‑1 (MQ=255) aCGCGGCTAACACCCTCAAAACAGACCCTTTTTTATTTTTTTTTGTTTTGATAACTTTGTGCGCTTTTACGCCAAAAATAAA‑CACCACCATCAGCAATAAAAAAACTGGTTGGTCTCCGCTAAAAATAAGCGACAGTACa < 1:3351378/140‑1 (MQ=255) ggctAACACCCTCCAAAACGAACCGATGGTATTTTTATTTCTTTTGATAAAATTTTGCGCTGATACTGCCAACATTAA‑CAGCACCATCACCAATATAAAAACAGGATGGTCTCCGCCAAAAATAAGCGACAGTACATAAc < 2:160949/140‑1 (MQ=255) ggctAACACCCAAAAAAACCAACCGTTTTTTTTTTTTTTTCTTTTTATAAATTTTTGCGCTGCTACTCCAAACATTAA‑CACCACCAACACCAACAAAAAAACAGGATGGTCTCCGCCAAAAATAAGCGACAGTACATAAc < 1:1628817/140‑1 (MQ=255) gAACACCCTCCAAACCGACCCGTTTGTATTTTTCTTTCTTTTGATAACATTTTGCGCTGATACTGCAAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCga < 2:3737286/140‑1 (MQ=255) gAACACCCTCCAAAACGAACCTTTTGTATTTTTCTTTCTTTTTATAACATTTGGCGCTGCTACTGCCAACATTAA‑CCGCACCATCAGCAAGATAAAAACCGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCga < 2:949886/140‑1 (MQ=255) cccaaaaaacCGAACCGATTTTTTTTTTATTTCTTTTTATAAATTTTTGCGCTTCTACTCCAAACTTTAA‑CACAACACTAAGAAAAATAAAAACCGGTTGTTCTCCGCTAAAAATAAGCGACAGTACATAACCGATGATa < 1:2262962/134‑1 (MQ=255) cccTCCAAACCGAACCGTTTGTATTTTTCTTTCGTTTGATAACTTTTTGCGCTGATAGTGCCAACTTTAA‑CAGCACCATCAGCAAGATAAAAACAGTATGGTCTCCGCTAAAAATACGCGACAGTACATAACCGATGATa < 2:2302099/140‑1 (MQ=255) cccTCCAAAACGAACCTTTGTTTTTTTTTTTTCGTTTTATAACATTTTGCGCTGCTACTGCAAACATTAA‑CCGCACAATCAGAAAGATAAAAACAGGATGGTCTCCGCTAAAAATAAGCGACAGTACATAACCGATGATa < 2:1242975/140‑1 (MQ=255) cccTCCAAAACGAACCTATTTTATTTTTCTTTCTTTTTATAACATTTTGCGCTGATAATGCCAAAATTAA‑CCGCACCATCAGCAATTTAAAAACTGGATGTTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATa < 2:1658519/140‑1 (MQ=255) cccTCCAAAACCAACCGTTTGTTTTTTTCTTTCTTTTGATAACATTTTGCGCGGCTACTGCCAACATTAA‑CAGCACCAGCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATa < 2:359942/140‑1 (MQ=255) ccacAAAACCAACGTATTTTATTTTTTTTTTGTTTTAAAAATTTTGGCGCTTCTACTG‑CAAAATTAACCCCCACATTCATAAATATAAAAACAGGATGGTATCGGCTAAAAAAAAGCGACAGTACATAACCGATGATAag < 1:523100/137‑1 (MQ=255) cTCCACAACCACCCTTTTTTATTTTTCTTTGGTTTGATACCATTTGGCGCTGCAACTCCCACAATTAA‑CACCACCATCACCAAGATAAAAACCGGAGGGACACCGCTAAAAATACGCGACAGTACATAACCGATGATAag < 1:1671548/140‑1 (MQ=255) cTCCAAACCGACCCGATTTTATTTTTCTTTCTTTTGATAACATGTTGCGCTGCTACTGCCAACTTTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAag < 2:2286609/140‑1 (MQ=255) tCCAAAACTAACCTTTTTTATTTTTCTTTGTTTTTATAACATTTTGCGCTGCTACTGCAAACATTAA‑CAGCACCATCAGCAATATAAAAACAGGATGGTCACCGCTAAAAATAAGCGACAGTACATAACCGATGATAagc < 1:1838964/140‑1 (MQ=255) tCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAagc > 2:148134/1‑140 (MQ=255) tCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAagc > 2:2524640/1‑140 (MQ=255) tCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAagc > 2:195096/1‑140 (MQ=255) tCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAagc > 2:1156488/1‑140 (MQ=255) accAAAACGACCCTTTTTTTTTTTTCTTTCGTTTGATAACATTTGGCGCTGCTACTCCCAAAATTAA‑CCCCACCATCAGAAATATAAAAACAGGATGGTCTCCGCTAAAAATAAGCGACAGTACATAACCGATGATAagc < 1:672742/139‑1 (MQ=255) acaaaaaCAAACCTTTTTTATTTTTGTTTCTTTTTATAAATTTTTGCGCTGCTACTGCCAACTTTAA‑CCGAACAATAAGCATTATAAAAACTGTCTGTTCTCCGCCAAAAATAAGCGACAGTACATAACCGATGATAagc < 1:491303/137‑1 (MQ=255) ccAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAagca > 1:971720/1‑140 (MQ=255) ccAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATGTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAagca > 1:1899714/1‑140 (MQ=255) cAAAACGAACCTTTTGTATTTTTCTTTCTTTTGATAACATTTTGCGCTGATACTGCAAACATTAA‑CAGAACCCTAAGCAATATAAAAACAGGTTGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAagcag < 2:1226543/140‑1 (MQ=255) aaaacccaaCCGATTTTATTTTTTTTTTTTTTTAAAACTTTTGGCGCTGCTCCGGCCAAAATTAC‑CCCCACAATCAGAAAGATAAAAACTGGTGGGTCTCCGCTAAAAAAACGCGACAGTACATAACCGATGATAagcag < 1:1745371/133‑1 (MQ=255) caCCTATTGTATTTTTTTTGCGTTTGATAACATTTTCGGCTGCTCCTGCCAACATTAA‑CAGCACCATAAGCAAGCTAACAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATACCCGATGATAAGCAGCTGTAcc < 2:3125285/139‑1 (MQ=255) aagcGATTGTTTTTTTCTTTCGTTTTATAACATTTTGCGCTGCTACTGCAAACATTTA‑CAGAACCATCAGAAAGATAAAAACAGGATGGTATCGGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTAcc < 2:2921923/137‑1 (MQ=255) ccgtattttattttAATTTCTTTTTAAAAAATTTTTCGCTGATACTGAAAACATTAA‑CACCAACATCACCATTATAAAAACAGTATGGTCTCCGCTAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCg < 1:2822544/136‑1 (MQ=255) aCCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCg > 1:1176378/1‑140 (MQ=255) tttgtttcGTTTTATAACATTTGGCGCGCCTACTGCCAAAATTAA‑CAGCACCACCCGAAATAAAAAAACCGGATGGTCTCCGCCAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGAtgg < 1:122926/140‑1 (MQ=255) ttctttcGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGAtggt > 1:1046633/1‑140 (MQ=255) ttctttcGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGAtggt > 1:1406884/1‑140 (MQ=255) ttcGTTTTTTAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACACTCACCAAGATAAAAACAGTATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCa < 2:411165/140‑1 (MQ=255) ttcGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCa < 2:2838186/140‑1 (MQ=255) ttcGTTTGATAAAATTTGGCGCTGCTACTGCCAACATTAA‑CAGCACAATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCa < 2:3083966/140‑1 (MQ=255) tcGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCaa > 1:1015547/1‑140 (MQ=255) tcGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGAGGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCaa > 1:3284078/1‑140 (MQ=255) ttaTAACATTTTGCGCTGCTACTCCAAACATAAA‑CACCACCATCAGAAATAAAAAAACAGGATGGTCTCCGCGAAAAAAAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATc < 1:3093385/138‑1 (MQ=255) ttaTAACATTTTGCGCTCCTACTGCAAACATTAA‑CACCACAAACCCAAATATAAAAACAGTATGGTCTCCGCCAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATc < 1:817624/138‑1 (MQ=255) tGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCCGCAAGATAAAACCAGGATGGTCTCCGCGAAAAATACGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATc < 2:1456841/140‑1 (MQ=255) tGATAACATTTTGCGCGGCGCCTGCCAACATTAA‑CAGCACAATCACCAAGATAAAAACCGGCTGGTCTCCGCCAAAAATACGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATc < 1:2926464/140‑1 (MQ=255) cgATAACATTGGGCGCGCCACCTGCAAACATAAA‑CCGCACCATCCCCAAGATAAAACCTGGATGTACTCGCCTAAAACTAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATc < 1:3045849/139‑1 (MQ=255) acttttgGCGCTGGTACTGACAACATTAA‑CACCAATATAATCAATATAAAAACATGTTGTTGTCCGCAAAAAAAAAGCGAAAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTc < 1:439967/137‑1 (MQ=255) aaaTTTTGCGCTGATACTGCCAAAATTAA‑CCCCACCATCAGCAAGATAAAAACAGGATGGTATCCGCTAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTc < 1:2381986/138‑1 (MQ=255) aCATTTTGCCCTGCTACTCCAAACATTAA‑CACCACCATCACAACGATAAAAACAGGATGGTCTCCGCTAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTc < 1:195400/140‑1 (MQ=255) tGCGCTGCTCCTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAAGTGTATGGTCTCCGCGAAAAATATGCGACAGTCGATAACCGATGATAAGAAGCTGTACGGCTGCCCGGATGGGTGCAAGGCTCATGTGTTGTTc > 2:2278208/1‑140 (MQ=255) tGCGCTGCTACTGCCAACATTAA‑CAGCACCATCCGCAAGATAAAAACAGGATGGTCTCCGCGAAATGTAAGCGACAGTACATACCCGATGATAAGCAGCTGTAGCGGTGCCCGGAGGGTGGCACTGAGCgtgtgtgtgtc > 2:1739574/1‑133 (MQ=255) gctACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGcc > 2:1966262/1‑140 (MQ=255) gctACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGcc > 2:1880100/1‑140 (MQ=255) gctACTGCCAACATTAA‑AAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCCCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGAGCATGTCTGTTTCTActcg > 2:3020237/1‑137 (MQ=255) cATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATGATGTCTTTTTCTACGCCGGCTTTAAAgg > 2:3660868/1‑140 (MQ=255) cATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAgg > 2:2531138/1‑140 (MQ=255) tAA‑CACCACCATCACCAACATAAAAACAGGAGGGTCTCCGCCAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGAtt < 1:1956030/140‑1 (MQ=255) tacaaccacaATCAGAAAGATAAAAACCGGTTGGTCTCCGCTAAAAATACGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGAtt < 1:2465450/134‑1 (MQ=255) gCACCATCAGCACGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGAt < 2:1849355/140‑1 (MQ=255) ccATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTCAGGGATGTTGATaaa > 2:2985470/1‑140 (MQ=255) ccATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATaaa > 2:733611/1‑140 (MQ=255) ccATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATaaa > 1:2492928/1‑140 (MQ=255) ccATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATaaa > 2:405189/1‑140 (MQ=255) ccATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATaaa > 1:2375898/1‑140 (MQ=255) ccATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATaaa > 2:1405294/1‑140 (MQ=255) ccATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATaaa > 2:2747277/1‑140 (MQ=255) caacAGCAAGATAAAAACAGTATGGTCTCCGCCAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATaaaa < 1:3443438/137‑1 (MQ=255) tCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATAAAAAc > 1:2211681/1‑140 (MQ=255) tCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGAGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGACCTGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATAAAAAc > 1:1294770/1‑140 (MQ=255) | GAAGAGACAGCAGAATTCCCTGCGTCACAATTTCTACAATCGCTAACGCGGCGAACACCCTCCAAAACGAACCGATTGTATTTTTCTTTCGTTTGATAACATTTTGCGCTGCTACTGCCAACATTAA‑CAGCACCATCAGCAAGATAAAAACAGGATGGTCTCCGCGAAAAATAAGCGACAGTACATAACCGATGATAAGCAGCTGTACCGCTGCCCGGATGGTGGCAATGATCATGTCTTTTTCTACGCCGGCTTTAAAGGATTTTGATAAAAAC > NZ_CP034943/1263859‑1264133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |